RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 CYB5R4Q7L1T6 521 aa11.83□□□□□ -0.52
TPM3-209ENST00000368527 MARCH10Q8NA82 808 aaPredicted RBP11.83□□□□□ -0.52
TPM3-209ENST00000368527 MYRIPQ8NFW9 859 aa11.83□□□□□ -0.52
TPM3-209ENST00000368527 ESR2Q92731 530 aa11.83□□□□□ -0.52
TPM3-209ENST00000368527 BRIP1Q9BX63 1249 aa11.83□□□□□ -0.52
TPM3-209ENST00000368527 ANKRD2Q9GZV1 360 aa11.83□□□□□ -0.52
TPM3-209ENST00000368527 NBPF3Q9H094 633 aa11.83□□□□□ -0.52
TPM3-209ENST00000368527 KIAA1468Q9P260 1216 aa11.83□□□□□ -0.52
TPM3-209ENST00000368527 SLC4A4Q9Y6R1 1079 aa11.83□□□□□ -0.52
TPM3-209ENST00000368527 A0A0G2JLW4 131 aa11.82□□□□□ -0.52
TPM3-209ENST00000368527 B4E1Z4 1266 aa11.82□□□□□ -0.52
TPM3-209ENST00000368527 DEXIO95424 95 aa11.82□□□□□ -0.52
TPM3-209ENST00000368527 TUBB4AP04350 444 aa11.82□□□□□ -0.52
TPM3-209ENST00000368527 HSPA1LP34931 641 aa11.82□□□□□ -0.52
TPM3-209ENST00000368527 GTF2F1P35269 517 aaKnown RBP eCLIP11.82□□□□□ -0.52
TPM3-209ENST00000368527 NLRP12P59046 1061 aa11.82□□□□□ -0.52
TPM3-209ENST00000368527 GUCY1B3Q02153 619 aa11.82□□□□□ -0.52
TPM3-209ENST00000368527 CHRNDQ07001 517 aa11.82□□□□□ -0.52
TPM3-209ENST00000368527 GLIPR1L2Q4G1C9 344 aa11.82□□□□□ -0.52
TPM3-209ENST00000368527 RILPL1Q5EBL4 403 aa11.82□□□□□ -0.52
TPM3-209ENST00000368527 KRT40Q6A162 431 aa11.82□□□□□ -0.52
TPM3-209ENST00000368527 VPS37DQ86XT2 251 aa11.82□□□□□ -0.52
TPM3-209ENST00000368527 FOXP1Q9H334 677 aaPredicted RBP11.82□□□□□ -0.52
TPM3-209ENST00000368527 GOLPH3LQ9H4A5 285 aa11.82□□□□□ -0.52
TPM3-209ENST00000368527 TTC12Q9H892 705 aaPredicted RBP11.82□□□□□ -0.52
TPM3-209ENST00000368527 CLIP2Q9UDT6 1046 aa11.82□□□□□ -0.52
TPM3-209ENST00000368527 BCL9LQ86UU0 1499 aa11.82□□□□□ -0.52
TPM3-209ENST00000368527 COL5A3P25940 1745 aaPredicted RBP11.81□□□□□ -0.52
TPM3-209ENST00000368527 UQCRHLA0A096LP55 91 aa11.81□□□□□ -0.52
TPM3-209ENST00000368527 MAGEB6P1A0A0J9YX57 407 aa11.81□□□□□ -0.52
TPM3-209ENST00000368527 KIF2AO00139 706 aaPredicted RBP11.81□□□□□ -0.52
TPM3-209ENST00000368527 IKBKBO14920 756 aa11.81□□□□□ -0.52
TPM3-209ENST00000368527 UQCRHP07919 91 aa11.81□□□□□ -0.52
TPM3-209ENST00000368527 ITPK1Q13572 414 aa11.81□□□□□ -0.52
TPM3-209ENST00000368527 HSP90AA2PQ14568 343 aaPredicted RBP11.81□□□□□ -0.52
TPM3-209ENST00000368527 NTRK3Q16288 839 aa11.81□□□□□ -0.52
TPM3-209ENST00000368527 RTN1Q16799 776 aa11.81□□□□□ -0.52
TPM3-209ENST00000368527 CT47A1Q5JQC4 288 aaPredicted RBP11.81□□□□□ -0.52
TPM3-209ENST00000368527 KANK3Q6NY19 840 aa11.81□□□□□ -0.52
TPM3-209ENST00000368527 CERS3Q8IU89 383 aa11.81□□□□□ -0.52
TPM3-209ENST00000368527 UBAC1Q9BSL1 405 aa11.81□□□□□ -0.52
TPM3-209ENST00000368527 PDCL3Q9H2J4 239 aa11.81□□□□□ -0.52
TPM3-209ENST00000368527 EPB41L4AQ9HCS5 686 aaPredicted RBP11.81□□□□□ -0.52
TPM3-209ENST00000368527 GPHNQ9NQX3 736 aaPredicted RBP11.81□□□□□ -0.52
TPM3-209ENST00000368527 RBM28Q9NW13 759 aaKnown RBP11.81□□□□□ -0.52
TPM3-209ENST00000368527 ZSWIM5Q9P217 1185 aa11.81□□□□□ -0.52
TPM3-209ENST00000368527 NEDD4P46934 1319 aa11.81□□□□□ -0.52
TPM3-209ENST00000368527 AP5Z1O43299 807 aa11.8□□□□□ -0.52
TPM3-209ENST00000368527 CBFA2T2O43439 604 aa11.8□□□□□ -0.52
TPM3-209ENST00000368527 ZNF202O95125 648 aa11.8□□□□□ -0.52
TPM3-209ENST00000368527 POLR3DP05423 398 aaPredicted RBP11.8□□□□□ -0.52
TPM3-209ENST00000368527 CYP7A1P22680 504 aa11.8□□□□□ -0.52
TPM3-209ENST00000368527 SYKP43405 635 aa11.8□□□□□ -0.52
TPM3-209ENST00000368527 KCNJ6P48051 423 aa11.8□□□□□ -0.52
TPM3-209ENST00000368527 NDUFA8P51970 172 aa11.8□□□□□ -0.52
TPM3-209ENST00000368527 PIP4K2BP78356 416 aa11.8□□□□□ -0.52
TPM3-209ENST00000368527 AKAP17AQ02040 695 aaKnown RBP11.8□□□□□ -0.52
TPM3-209ENST00000368527 CCDC178Q5BJE1 867 aa11.8□□□□□ -0.52
TPM3-209ENST00000368527 AXDND1Q5T1B0 1012 aaPredicted RBP11.8□□□□□ -0.52
TPM3-209ENST00000368527 SPTY2D1Q68D10 685 aaPredicted RBP11.8□□□□□ -0.52
TPM3-209ENST00000368527 MICU3Q86XE3 530 aa11.8□□□□□ -0.52
TPM3-209ENST00000368527 NOSTRINQ8IVI9 506 aa11.8□□□□□ -0.52
TPM3-209ENST00000368527 ZNF579Q8NAF0 562 aaKnown RBP11.8□□□□□ -0.52
TPM3-209ENST00000368527 HELBQ8NG08 1087 aaPredicted RBP11.8□□□□□ -0.52
TPM3-209ENST00000368527 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.8□□□□□ -0.52
TPM3-209ENST00000368527 RNF26Q9BY78 433 aaPredicted RBP11.8□□□□□ -0.52
TPM3-209ENST00000368527 ARMT1Q9H993 441 aa11.8□□□□□ -0.52
TPM3-209ENST00000368527 SEC31BQ9NQW1 1179 aa11.8□□□□□ -0.52
TPM3-209ENST00000368527 KCND1Q9NSA2 647 aa11.8□□□□□ -0.52
TPM3-209ENST00000368527 FAM13BQ9NYF5 915 aa11.8□□□□□ -0.52
TPM3-209ENST00000368527 DACH1Q9UI36 760 aa11.8□□□□□ -0.52
TPM3-209ENST00000368527 CLIC4Q9Y696 253 aa11.8□□□□□ -0.52
TPM3-209ENST00000368527 SCN7AQ01118 1682 aa11.79□□□□□ -0.52
TPM3-209ENST00000368527 TOM1O60784 492 aa11.79□□□□□ -0.52
TPM3-209ENST00000368527 MMP1P03956 469 aa11.79□□□□□ -0.52
TPM3-209ENST00000368527 BCAMP50895 628 aa11.79□□□□□ -0.52
TPM3-209ENST00000368527 FOSBP53539 338 aa11.79□□□□□ -0.52
TPM3-209ENST00000368527 PPARAQ07869 468 aa11.79□□□□□ -0.52
TPM3-209ENST00000368527 VPS72Q15906 364 aa11.79□□□□□ -0.52
TPM3-209ENST00000368527 RESP18Q5W5W9 173 aa11.79□□□□□ -0.52
TPM3-209ENST00000368527 CCDC186Q7Z3E2 898 aa11.79□□□□□ -0.52
TPM3-209ENST00000368527 IQCA1Q86XH1 822 aa11.79□□□□□ -0.52
TPM3-209ENST00000368527 FAM177A1Q8N128 213 aaPredicted RBP11.79□□□□□ -0.52
TPM3-209ENST00000368527 KRI1Q8N9T8 703 aaKnown RBP11.79□□□□□ -0.52
TPM3-209ENST00000368527 SPC24Q8NBT2 197 aa11.79□□□□□ -0.52
TPM3-209ENST00000368527 CCDC150Q8NCX0 1101 aa11.79□□□□□ -0.52
TPM3-209ENST00000368527 PYM1Q9BRP8 204 aaKnown RBP11.79□□□□□ -0.52
TPM3-209ENST00000368527 BRMS1Q9HCU9 246 aa11.79□□□□□ -0.52
TPM3-209ENST00000368527 TUBE1Q9UJT0 475 aa11.79□□□□□ -0.52
TPM3-209ENST00000368527 HPSEQ9Y251 543 aa11.79□□□□□ -0.52
TPM3-209ENST00000368527 PAXBP1Q9Y5B6 917 aa11.79□□□□□ -0.52
TPM3-209ENST00000368527 A0A1B0GVL5 298 aa11.78□□□□□ -0.52
TPM3-209ENST00000368527 CCP110O43303 1012 aa11.78□□□□□ -0.52
TPM3-209ENST00000368527 DTNBO60941 627 aa11.78□□□□□ -0.52
TPM3-209ENST00000368527 RPS6KA4O75676 772 aa11.78□□□□□ -0.52
TPM3-209ENST00000368527 DDAH1O94760 285 aa11.78□□□□□ -0.52
TPM3-209ENST00000368527 ADAMTS2O95450 1211 aa11.78□□□□□ -0.52
TPM3-209ENST00000368527 FGRP09769 529 aa11.78□□□□□ -0.52
TPM3-209ENST00000368527 PFKFB1P16118 471 aa11.78□□□□□ -0.52
TPM3-209ENST00000368527 GTF2E1P29083 439 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms