RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.52□□□□□ -0.89
SSR2-202ENST00000368311 NR2E3Q9Y5X4 410 aa9.52□□□□□ -0.89
SSR2-202ENST00000368311 KBTBD13C9JR72 458 aa9.52□□□□□ -0.89
SSR2-202ENST00000368311 CASTP20810 708 aaKnown RBP9.52□□□□□ -0.89
SSR2-202ENST00000368311 PRMT2P55345 433 aa9.52□□□□□ -0.89
SSR2-202ENST00000368311 TAF12Q16514 161 aa9.52□□□□□ -0.89
SSR2-202ENST00000368311 FAM182BQ5T319 152 aa9.52□□□□□ -0.89
SSR2-202ENST00000368311 ZC3H15Q8WU90 426 aaKnown RBP9.52□□□□□ -0.89
SSR2-202ENST00000368311 MAP7D2Q96T17 732 aa9.52□□□□□ -0.89
SSR2-202ENST00000368311 CCDC171Q6TFL3 1326 aa9.51□□□□□ -0.89
SSR2-202ENST00000368311 WDR33Q9C0J8 1336 aaKnown RBP9.51□□□□□ -0.89
SSR2-202ENST00000368311 ZBTB43O43298 467 aa9.51□□□□□ -0.89
SSR2-202ENST00000368311 CHMP4BP1P59074 171 aa9.51□□□□□ -0.89
SSR2-202ENST00000368311 DEFB132Q7Z7B7 95 aa9.51□□□□□ -0.89
SSR2-202ENST00000368311 KIAA0825Q8IV33 1275 aa9.51□□□□□ -0.89
SSR2-202ENST00000368311 SMARCE1Q969G3 411 aa9.51□□□□□ -0.89
SSR2-202ENST00000368311 CSRNP1Q96S65 589 aa9.51□□□□□ -0.89
SSR2-202ENST00000368311 EXOC7Q9UPT5 735 aa9.51□□□□□ -0.89
SSR2-202ENST00000368311 USP16Q9Y5T5 823 aa9.51□□□□□ -0.89
SSR2-202ENST00000368311 KINO60870 393 aaKnown RBP9.51□□□□□ -0.89
SSR2-202ENST00000368311 NEBLO76041 1014 aa9.51□□□□□ -0.89
SSR2-202ENST00000368311 ANXA1P04083 346 aa9.51□□□□□ -0.89
SSR2-202ENST00000368311 CETN2P41208 172 aa9.51□□□□□ -0.89
SSR2-202ENST00000368311 PPP1R2P41236 205 aa9.51□□□□□ -0.89
SSR2-202ENST00000368311 BRPF1P55201 1214 aaPredicted RBP9.51□□□□□ -0.89
SSR2-202ENST00000368311 ANKRD13AQ8IZ07 590 aa9.51□□□□□ -0.89
SSR2-202ENST00000368311 PSMD1Q99460 953 aa9.51□□□□□ -0.89
SSR2-202ENST00000368311 ENTPD3O75355 529 aa9.51□□□□□ -0.89
SSR2-202ENST00000368311 TMOD1P28289 359 aa9.51□□□□□ -0.89
SSR2-202ENST00000368311 RSBN1LQ6PCB5 846 aaPredicted RBP9.51□□□□□ -0.89
SSR2-202ENST00000368311 SASS6Q6UVJ0 657 aa9.51□□□□□ -0.89
SSR2-202ENST00000368311 COPRSQ9NQ92 184 aa9.51□□□□□ -0.89
SSR2-202ENST00000368311 UBE3CQ15386 1083 aa9.51□□□□□ -0.89
SSR2-202ENST00000368311 TBC1D9BQ66K14 1250 aa9.51□□□□□ -0.89
SSR2-202ENST00000368311 MSANTD4Q8NCY6 345 aa9.51□□□□□ -0.89
SSR2-202ENST00000368311 HAUS2Q9NVX0 235 aa9.51□□□□□ -0.89
SSR2-202ENST00000368311 ANAPC15P60006 121 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 ICA1Q05084 483 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 CCDC173Q0VFZ6 552 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 HAUS3Q68CZ6 603 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 GIMAP6Q6P9H5 292 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 OTUD6AQ7L8S5 288 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 NEK1Q96PY6 1258 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.5□□□□□ -0.894e-12■■■■■ 49.9
SSR2-202ENST00000368311 FMN2Q9NZ56 1722 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 MBD4O95243 580 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 PLCB2Q00722 1185 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 FERMT1Q9BQL6 677 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 WWC3Q9ULE0 1092 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 ASB14A6NK59 587 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 RAD17O75943 681 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 CCDC172P0C7W6 258 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 CNGA1P29973 690 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 CA8P35219 290 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 GCLCP48506 637 aaPredicted RBP9.5□□□□□ -0.89
SSR2-202ENST00000368311 PRR5LQ6MZQ0 368 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 CREBRFQ8IUR6 639 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 ACTN1P12814 892 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 ASPRV1Q53RT3 343 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 ANKRD35Q8N283 1001 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 LINC00116Q8NCU8 138 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 HTATIP2Q9BUP3 242 aa9.5□□□□□ -0.89
SSR2-202ENST00000368311 OSBPL5Q9H0X9 879 aaPredicted RBP9.5□□□□□ -0.89
SSR2-202ENST00000368311 TOP1P11387 765 aaKnown RBP9.49□□□□□ -0.89
SSR2-202ENST00000368311 LRSAM1Q6UWE0 723 aa9.49□□□□□ -0.89
SSR2-202ENST00000368311 TMEM179Q6ZVK1 233 aa9.49□□□□□ -0.89
SSR2-202ENST00000368311 IFT74Q96LB3 600 aa9.49□□□□□ -0.89
SSR2-202ENST00000368311 UNCXA6NJT0 531 aa9.49□□□□□ -0.89
SSR2-202ENST00000368311 NCAPG2Q86XI2 1143 aa9.49□□□□□ -0.89
SSR2-202ENST00000368311 FAM114A1Q8IWE2 563 aa9.49□□□□□ -0.89
SSR2-202ENST00000368311 SNRKQ9NRH2 765 aa9.49□□□□□ -0.89
SSR2-202ENST00000368311 CNOT7Q9UIV1 285 aaKnown RBP9.49□□□□□ -0.89
SSR2-202ENST00000368311 KIF28PB7ZC32 967 aa9.49□□□□□ -0.89
SSR2-202ENST00000368311 FBLN1P23142 703 aa9.49□□□□□ -0.89
SSR2-202ENST00000368311 HOXA7P31268 230 aaPredicted RBP9.49□□□□□ -0.89
SSR2-202ENST00000368311 COL23A1Q86Y22 540 aaPredicted RBP9.49□□□□□ -0.89
SSR2-202ENST00000368311 TRIM47Q96LD4 638 aa9.49□□□□□ -0.89
SSR2-202ENST00000368311 PAGR1Q9BTK6 254 aa9.49□□□□□ -0.89
SSR2-202ENST00000368311 RMND1Q9NWS8 449 aa9.49□□□□□ -0.89
SSR2-202ENST00000368311 AXIN2Q9Y2T1 843 aa9.49□□□□□ -0.89
SSR2-202ENST00000368311 PATL2C9JE40 543 aaKnown RBP9.49□□□□□ -0.89
SSR2-202ENST00000368311 XPOTO43592 962 aaKnown RBP9.49□□□□□ -0.89
SSR2-202ENST00000368311 ATP5JP18859 108 aa9.49□□□□□ -0.89
SSR2-202ENST00000368311 SUSD4Q5VX71 490 aa9.49□□□□□ -0.89
SSR2-202ENST00000368311 MICALL2Q8IY33 904 aa9.49□□□□□ -0.89
SSR2-202ENST00000368311 C8orf76Q96K31 380 aa9.49□□□□□ -0.89
SSR2-202ENST00000368311 DBNDD1Q9H9R9 158 aa9.49□□□□□ -0.89
SSR2-202ENST00000368311 ANKRD62A6NC57 917 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 BACH1O14867 736 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 CELF2O95319 508 aaKnown RBP9.48□□□□□ -0.89
SSR2-202ENST00000368311 BCAMP50895 628 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 SMTNP53814 917 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 HUNKP57058 714 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 CDC42EP1Q00587 391 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 GBA2Q9HCG7 927 aaPredicted RBP9.48□□□□□ -0.89
SSR2-202ENST00000368311 NRBP2Q9NSY0 501 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 SLC25A27O95847 323 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 TAF1CQ15572 869 aaPredicted RBP9.48□□□□□ -0.89
SSR2-202ENST00000368311 POTEAQ6S8J7 498 aa9.48□□□□□ -0.89
SSR2-202ENST00000368311 DPF2Q92785 391 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms