RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 GAKO14976 1311 aa12.05□□□□□ -0.48
CD48-202ENST00000368046 PCNTO95613 3336 aa12.04□□□□□ -0.48
CD48-202ENST00000368046 MAP4K4O95819 1239 aaPredicted RBP12.04□□□□□ -0.48
CD48-202ENST00000368046 IFIT2P09913 472 aaKnown RBP12.04□□□□□ -0.48
CD48-202ENST00000368046 IREB2P48200 963 aaKnown RBP12.04□□□□□ -0.48
CD48-202ENST00000368046 ZNF384Q8TF68 577 aa12.04□□□□□ -0.48
CD48-202ENST00000368046 ZIC5Q96T25 663 aa12.04□□□□□ -0.48
CD48-202ENST00000368046 IDI2Q9BXS1 227 aa12.04□□□□□ -0.48
CD48-202ENST00000368046 LRRCC1Q9C099 1032 aa12.04□□□□□ -0.48
CD48-202ENST00000368046 FZD1Q9UP38 647 aa12.04□□□□□ -0.48
CD48-202ENST00000368046 PCDHB15Q9Y5E8 787 aa12.04□□□□□ -0.48
CD48-202ENST00000368046 FOXN1O15353 648 aa12.03□□□□□ -0.48
CD48-202ENST00000368046 AAMPQ13685 434 aa12.03□□□□□ -0.48
CD48-202ENST00000368046 RASAL3Q86YV0 1011 aa12.03□□□□□ -0.48
CD48-202ENST00000368046 ANKRD13AQ8IZ07 590 aa12.03□□□□□ -0.48
CD48-202ENST00000368046 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.03□□□□□ -0.48
CD48-202ENST00000368046 CSRNP1Q96S65 589 aa12.03□□□□□ -0.48
CD48-202ENST00000368046 CRBNQ96SW2 442 aa12.03□□□□□ -0.48
CD48-202ENST00000368046 FAM198AQ9UFP1 575 aa12.03□□□□□ -0.48
CD48-202ENST00000368046 MROH7-TTC4A0A0A0MT08 1334 aa12.03□□□□□ -0.48
CD48-202ENST00000368046 ENTPD3O75355 529 aa12.02□□□□□ -0.49
CD48-202ENST00000368046 BTDP43251 543 aa12.02□□□□□ -0.49
CD48-202ENST00000368046 CTCFP49711 727 aaPredicted RBP12.02□□□□□ -0.49
CD48-202ENST00000368046 MAP3K9P80192 1104 aa12.02□□□□□ -0.49
CD48-202ENST00000368046 TCP10Q12799 353 aa12.02□□□□□ -0.49
CD48-202ENST00000368046 NFIAQ12857 509 aa12.02□□□□□ -0.49
CD48-202ENST00000368046 NAA16Q6N069 864 aaPredicted RBP12.02□□□□□ -0.49
CD48-202ENST00000368046 BCL11AQ9H165 835 aa12.02□□□□□ -0.49
CD48-202ENST00000368046 ARAP2Q8WZ64 1704 aa12.01□□□□□ -0.49
CD48-202ENST00000368046 CA12O43570 354 aa12.01□□□□□ -0.49
CD48-202ENST00000368046 BAG3O95817 575 aa12.01□□□□□ -0.49
CD48-202ENST00000368046 TM4SF4P48230 202 aa12.01□□□□□ -0.49
CD48-202ENST00000368046 INHBEP58166 350 aa12.01□□□□□ -0.49
CD48-202ENST00000368046 RHBDL3P58872 404 aa12.01□□□□□ -0.49
CD48-202ENST00000368046 PPP4CP60510 307 aa12.01□□□□□ -0.49
CD48-202ENST00000368046 TTF1Q15361 905 aaPredicted RBP12.01□□□□□ -0.49
CD48-202ENST00000368046 SPRYD7Q5W111 196 aa12.01□□□□□ -0.49
CD48-202ENST00000368046 TMED8Q6PL24 325 aaPredicted RBP12.01□□□□□ -0.49
CD48-202ENST00000368046 ZFPM1Q8IX07 1006 aa12.01□□□□□ -0.49
CD48-202ENST00000368046 MARVELD3Q96A59 401 aa12.01□□□□□ -0.49
CD48-202ENST00000368046 PIH1D3Q9NQM4 214 aaKnown RBP12.01□□□□□ -0.49
CD48-202ENST00000368046 SMARCA5O60264 1052 aaPredicted RBP12□□□□□ -0.49
CD48-202ENST00000368046 WDHD1O75717 1129 aaPredicted RBP12□□□□□ -0.49
CD48-202ENST00000368046 ATP5JP18859 108 aa12□□□□□ -0.49
CD48-202ENST00000368046 RGS3P49796 1198 aa12□□□□□ -0.49
CD48-202ENST00000368046 MAP3K12Q12852 859 aa12□□□□□ -0.49
CD48-202ENST00000368046 DCAF15Q66K64 600 aa12□□□□□ -0.49
CD48-202ENST00000368046 PPP1R3FQ6ZSY5 799 aaPredicted RBP12□□□□□ -0.49
CD48-202ENST00000368046 CLMNQ96JQ2 1002 aa12□□□□□ -0.49
CD48-202ENST00000368046 NOL10Q9BSC4 688 aaKnown RBP12□□□□□ -0.49
CD48-202ENST00000368046 ANTXR1Q9H6X2 564 aa12□□□□□ -0.49
CD48-202ENST00000368046 PRDM10Q9NQV6 1147 aa12□□□□□ -0.49
CD48-202ENST00000368046 SUPT16HQ9Y5B9 1047 aaKnown RBP12□□□□□ -0.49
CD48-202ENST00000368046 PAPPA2Q9BXP8 1791 aa12□□□□□ -0.49
CD48-202ENST00000368046 IDH1O75874 414 aaKnown RBP11.99□□□□□ -0.49
CD48-202ENST00000368046 ZBTB48P10074 688 aaPredicted RBP11.99□□□□□ -0.49
CD48-202ENST00000368046 CYP7A1P22680 504 aa11.99□□□□□ -0.49
CD48-202ENST00000368046 LBX1P52954 281 aa11.99□□□□□ -0.49
CD48-202ENST00000368046 MAP3K10Q02779 954 aa11.99□□□□□ -0.49
CD48-202ENST00000368046 MIGA2Q7L4E1 593 aa11.99□□□□□ -0.49
CD48-202ENST00000368046 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.99□□□□□ -0.49
CD48-202ENST00000368046 TMEM106CQ9BVX2 250 aa11.99□□□□□ -0.49
CD48-202ENST00000368046 ZNF341Q9BYN7 854 aa11.99□□□□□ -0.49
CD48-202ENST00000368046 RNF186Q9NXI6 227 aa11.99□□□□□ -0.49
CD48-202ENST00000368046 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.99□□□□□ -0.49
CD48-202ENST00000368046 NDUFB9Q9Y6M9 179 aa11.99□□□□□ -0.49
CD48-202ENST00000368046 RPAP1Q9BWH6 1393 aaPredicted RBP11.99□□□□□ -0.49
CD48-202ENST00000368046 SSC5DA1L4H1 1573 aa11.99□□□□□ -0.49
CD48-202ENST00000368046 SNPHO15079 494 aa11.98□□□□□ -0.49
CD48-202ENST00000368046 HSPA8P11142 646 aaKnown RBP11.98□□□□□ -0.49
CD48-202ENST00000368046 PICALMQ13492 652 aa11.98□□□□□ -0.49
CD48-202ENST00000368046 COL13A1Q5TAT6 717 aaPredicted RBP11.98□□□□□ -0.49
CD48-202ENST00000368046 SH3BP5LQ7L8J4 393 aa11.98□□□□□ -0.49
CD48-202ENST00000368046 ZSCAN29Q8IWY8 852 aaPredicted RBP11.98□□□□□ -0.49
CD48-202ENST00000368046 WNK4Q96J92 1243 aa11.98□□□□□ -0.49
CD48-202ENST00000368046 BOLA2Q9H3K6 86 aa11.98□□□□□ -0.49
CD48-202ENST00000368046 DDX4Q9NQI0 724 aaKnown RBP11.98□□□□□ -0.49
CD48-202ENST00000368046 AATFQ9NY61 560 aaKnown RBP eCLIP11.98□□□□□ -0.49
CD48-202ENST00000368046 ZNF112Q9UJU3 913 aa11.98□□□□□ -0.49
CD48-202ENST00000368046 CSADQ9Y600 493 aa11.98□□□□□ -0.49
CD48-202ENST00000368046 DDTLA6NHG4 134 aaPredicted RBP11.97□□□□□ -0.49
CD48-202ENST00000368046 MANSC4A6NHS7 340 aaPredicted RBP11.97□□□□□ -0.49
CD48-202ENST00000368046 GOLIM4O00461 696 aa11.97□□□□□ -0.49
CD48-202ENST00000368046 TRPA1O75762 1119 aa11.97□□□□□ -0.49
CD48-202ENST00000368046 SREBF2Q12772 1141 aa11.97□□□□□ -0.49
CD48-202ENST00000368046 MKRN3Q13064 507 aaKnown RBP11.97□□□□□ -0.49
CD48-202ENST00000368046 HDAC1Q13547 482 aaPredicted RBP11.97□□□□□ -0.49
CD48-202ENST00000368046 VGLL4Q14135 290 aa11.97□□□□□ -0.49
CD48-202ENST00000368046 SLC9C2Q5TAH2 1124 aa11.97□□□□□ -0.49
CD48-202ENST00000368046 ADGRA1Q86SQ6 560 aa11.97□□□□□ -0.49
CD48-202ENST00000368046 CERS3Q8IU89 383 aa11.97□□□□□ -0.49
CD48-202ENST00000368046 TEX11Q8IYF3 940 aa11.97□□□□□ -0.49
CD48-202ENST00000368046 MAGEB6Q8N7X4 407 aa11.97□□□□□ -0.49
CD48-202ENST00000368046 SH3RF3Q8TEJ3 882 aaPredicted RBP11.97□□□□□ -0.49
CD48-202ENST00000368046 ZKSCAN4Q969J2 545 aaPredicted RBP11.97□□□□□ -0.49
CD48-202ENST00000368046 WRNIP1Q96S55 665 aa11.97□□□□□ -0.49
CD48-202ENST00000368046 DNAJC2Q99543 621 aaKnown RBP11.97□□□□□ -0.49
CD48-202ENST00000368046 ELP3Q9H9T3 547 aa11.97□□□□□ -0.49
CD48-202ENST00000368046 ECHDC1Q9NTX5 307 aa11.97□□□□□ -0.49
CD48-202ENST00000368046 SAGE1Q9NXZ1 904 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms