RNA–Protein interactions for RNA: ENST00000366704.1

OBSCN-202, Transcript of obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF, humanhuman

TSL 2

Gene OBSCN, Length 2,534 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OBSCN-202ENST00000366704 SMC2O95347 1197 aa16.7■□□□□ 0.26
OBSCN-202ENST00000366704 ATP6V1AP38606 617 aa16.7■□□□□ 0.26
OBSCN-202ENST00000366704 CRKLP46109 303 aaKnown RBP16.7■□□□□ 0.26
OBSCN-202ENST00000366704 AKNAD1Q5T1N1 836 aa16.7■□□□□ 0.26
OBSCN-202ENST00000366704 MIGA1Q8NAN2 632 aa16.7■□□□□ 0.26
OBSCN-202ENST00000366704 SLC4A4Q9Y6R1 1079 aa16.7■□□□□ 0.26
OBSCN-202ENST00000366704 USP27XA6NNY8 438 aa16.69■□□□□ 0.26
OBSCN-202ENST00000366704 SSRP1Q08945 709 aaKnown RBP16.69■□□□□ 0.26
OBSCN-202ENST00000366704 MFSD6Q6ZSS7 791 aa16.69■□□□□ 0.26
OBSCN-202ENST00000366704 IGHMBP2P38935 993 aaKnown RBP16.69■□□□□ 0.26
OBSCN-202ENST00000366704 LIFRP42702 1097 aa16.69■□□□□ 0.26
OBSCN-202ENST00000366704 PTPAQ15257 358 aa16.69■□□□□ 0.26
OBSCN-202ENST00000366704 SHC4Q6S5L8 630 aa16.69■□□□□ 0.26
OBSCN-202ENST00000366704 NBPF11Q86T75 865 aa16.69■□□□□ 0.26
OBSCN-202ENST00000366704 JMYQ8N9B5 988 aa16.69■□□□□ 0.26
OBSCN-202ENST00000366704 CLIC6Q96NY7 704 aa16.69■□□□□ 0.26
OBSCN-202ENST00000366704 BPIFA3Q9BQP9 254 aa16.69■□□□□ 0.26
OBSCN-202ENST00000366704 CNNM2Q9H8M5 875 aa16.69■□□□□ 0.26
OBSCN-202ENST00000366704 PPP6R2O75170 966 aa16.68■□□□□ 0.26
OBSCN-202ENST00000366704 CCZ1BP86790 482 aa16.68■□□□□ 0.26
OBSCN-202ENST00000366704 CCZ1P86791 482 aaPredicted RBP16.68■□□□□ 0.26
OBSCN-202ENST00000366704 CCDC152Q4G0S7 254 aa16.68■□□□□ 0.26
OBSCN-202ENST00000366704 RGS22Q8NE09 1264 aa16.68■□□□□ 0.26
OBSCN-202ENST00000366704 MAP3K14Q99558 947 aa16.68■□□□□ 0.26
OBSCN-202ENST00000366704 KRT23Q9C075 422 aa16.68■□□□□ 0.26
OBSCN-202ENST00000366704 XPO4Q9C0E2 1151 aaKnown RBP16.68■□□□□ 0.26
OBSCN-202ENST00000366704 IFNKQ9P0W0 207 aa16.68■□□□□ 0.26
OBSCN-202ENST00000366704 IQSEC3Q9UPP2 1182 aaPredicted RBP16.68■□□□□ 0.26
OBSCN-202ENST00000366704 RBM6P78332 1123 aaKnown RBP16.68■□□□□ 0.26
OBSCN-202ENST00000366704 ZNF592Q92610 1267 aa16.68■□□□□ 0.26
OBSCN-202ENST00000366704 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.68■□□□□ 0.26
OBSCN-202ENST00000366704 LRP2BPQ9P2M1 347 aa16.68■□□□□ 0.26
OBSCN-202ENST00000366704 SMTNL1A8MU46 457 aa16.67■□□□□ 0.26
OBSCN-202ENST00000366704 CAMTA2O94983 1202 aa16.67■□□□□ 0.26
OBSCN-202ENST00000366704 U2AF2P26368 475 aaKnown RBP eCLIP16.67■□□□□ 0.26
OBSCN-202ENST00000366704 GUCY1A2P33402 732 aa16.67■□□□□ 0.26
OBSCN-202ENST00000366704 CCDC82Q8N4S0 544 aa16.67■□□□□ 0.26
OBSCN-202ENST00000366704 NACAP1Q9BZK3 213 aa16.67■□□□□ 0.26
OBSCN-202ENST00000366704 NIP7Q9Y221 180 aaKnown RBP eCLIP16.67■□□□□ 0.26
OBSCN-202ENST00000366704 HPSEQ9Y251 543 aa16.67■□□□□ 0.26
OBSCN-202ENST00000366704 COL16A1Q07092 1604 aaPredicted RBP16.67■□□□□ 0.26
OBSCN-202ENST00000366704 WNK3Q9BYP7 1800 aa16.67■□□□□ 0.26
OBSCN-202ENST00000366704 FMNL1O95466 1100 aaPredicted RBP16.67■□□□□ 0.26
OBSCN-202ENST00000366704 TPM4P67936 248 aa16.67■□□□□ 0.26
OBSCN-202ENST00000366704 TIAM2Q8IVF5 1701 aa16.67■□□□□ 0.26
OBSCN-202ENST00000366704 PHLPP1O60346 1717 aa16.66■□□□□ 0.26
OBSCN-202ENST00000366704 CHRNDQ07001 517 aa16.66■□□□□ 0.26
OBSCN-202ENST00000366704 PNOCQ13519 176 aa16.66■□□□□ 0.26
OBSCN-202ENST00000366704 WTAPQ15007 396 aa16.66■□□□□ 0.26
OBSCN-202ENST00000366704 TIGD1Q96MW7 591 aa16.66■□□□□ 0.26
OBSCN-202ENST00000366704 TRMT1Q9NXH9 659 aaKnown RBP16.66■□□□□ 0.26
OBSCN-202ENST00000366704 STK36Q9NRP7 1315 aa16.66■□□□□ 0.26
OBSCN-202ENST00000366704 GNAT2P19087 354 aa16.66■□□□□ 0.26
OBSCN-202ENST00000366704 LMOD1P29536 600 aaPredicted RBP16.66■□□□□ 0.26
OBSCN-202ENST00000366704 PDE4CQ08493 712 aa16.66■□□□□ 0.26
OBSCN-202ENST00000366704 PARP10Q53GL7 1025 aa16.66■□□□□ 0.26
OBSCN-202ENST00000366704 CEP135Q66GS9 1140 aa16.66■□□□□ 0.26
OBSCN-202ENST00000366704 TMC6Q7Z403 805 aa16.66■□□□□ 0.26
OBSCN-202ENST00000366704 CMTR1Q8N1G2 835 aaKnown RBP16.66■□□□□ 0.26
OBSCN-202ENST00000366704 STAG1Q8WVM7 1258 aa16.66■□□□□ 0.26
OBSCN-202ENST00000366704 KCNJ14Q9UNX9 436 aa16.66■□□□□ 0.26
OBSCN-202ENST00000366704 LOC102724428A0A0B4J2F2 783 aa16.65■□□□□ 0.26
OBSCN-202ENST00000366704 BTBD18B2RXH4 712 aa16.65■□□□□ 0.26
OBSCN-202ENST00000366704 CTIFO43310 598 aaKnown RBP16.65■□□□□ 0.26
OBSCN-202ENST00000366704 NTSR2O95665 410 aa16.65■□□□□ 0.26
OBSCN-202ENST00000366704 IFNAR1P17181 557 aa16.65■□□□□ 0.26
OBSCN-202ENST00000366704 SIK1P57059 783 aa16.65■□□□□ 0.26
OBSCN-202ENST00000366704 GSDMDP57764 484 aa16.65■□□□□ 0.26
OBSCN-202ENST00000366704 ITPK1Q13572 414 aa16.65■□□□□ 0.26
OBSCN-202ENST00000366704 NCAPHQ15003 741 aa16.65■□□□□ 0.26
OBSCN-202ENST00000366704 SART3Q15020 963 aaKnown RBP16.65■□□□□ 0.26
OBSCN-202ENST00000366704 DDB1Q16531 1140 aa16.65■□□□□ 0.26
OBSCN-202ENST00000366704 RTN1Q16799 776 aa16.65■□□□□ 0.26
OBSCN-202ENST00000366704 RESP18Q5W5W9 173 aa16.65■□□□□ 0.26
OBSCN-202ENST00000366704 ERICH2A1L162 156 aa16.65■□□□□ 0.26
OBSCN-202ENST00000366704 SPECC1Q5M775 1068 aa16.65■□□□□ 0.26
OBSCN-202ENST00000366704 NUP133Q8WUM0 1156 aa16.65■□□□□ 0.26
OBSCN-202ENST00000366704 PNPLA7Q6ZV29 1317 aa16.65■□□□□ 0.26
OBSCN-202ENST00000366704 CYP7A1P22680 504 aa16.64■□□□□ 0.25
OBSCN-202ENST00000366704 NOSTRINQ8IVI9 506 aa16.64■□□□□ 0.25
OBSCN-202ENST00000366704 CCDC112Q8NEF3 446 aa16.64■□□□□ 0.25
OBSCN-202ENST00000366704 SDR42E1Q8WUS8 393 aa16.64■□□□□ 0.25
OBSCN-202ENST00000366704 WASF1Q92558 559 aa16.64■□□□□ 0.25
OBSCN-202ENST00000366704 OSBPL5Q9H0X9 879 aaPredicted RBP16.64■□□□□ 0.25
OBSCN-202ENST00000366704 IMPACTQ9P2X3 320 aa16.64■□□□□ 0.25
OBSCN-202ENST00000366704 ABCF2Q9UG63 623 aa16.64■□□□□ 0.25
OBSCN-202ENST00000366704 PAXBP1Q9Y5B6 917 aa16.64■□□□□ 0.25
OBSCN-202ENST00000366704 CUTAO60888 179 aa16.64■□□□□ 0.25
OBSCN-202ENST00000366704 MMP1P03956 469 aa16.64■□□□□ 0.25
OBSCN-202ENST00000366704 SAFBQ15424 915 aaKnown RBP eCLIP16.64■□□□□ 0.25
OBSCN-202ENST00000366704 PTPN14Q15678 1187 aa16.64■□□□□ 0.25
OBSCN-202ENST00000366704 DIS3L2Q8IYB7 885 aaKnown RBP16.64■□□□□ 0.25
OBSCN-202ENST00000366704 TRIM22Q8IYM9 498 aa16.64■□□□□ 0.25
OBSCN-202ENST00000366704 TUBE1Q9UJT0 475 aa16.64■□□□□ 0.25
OBSCN-202ENST00000366704 BCORQ6W2J9 1755 aa16.64■□□□□ 0.25
OBSCN-202ENST00000366704 MINDY4BA8MYZ0 360 aa16.63■□□□□ 0.25
OBSCN-202ENST00000366704 ADAMTS2O95450 1211 aa16.63■□□□□ 0.25
OBSCN-202ENST00000366704 LONRF3Q496Y0 759 aa16.63■□□□□ 0.25
OBSCN-202ENST00000366704 ADGRA1Q86SQ6 560 aa16.63■□□□□ 0.25
OBSCN-202ENST00000366704 BCL11BQ9C0K0 894 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms