RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 CAP1Q01518 475 aa16.83■□□□□ 0.28
TNFRSF1A-202ENST00000366159 MAPK8IP2Q13387 824 aaPredicted RBP16.83■□□□□ 0.28
TNFRSF1A-202ENST00000366159 FBXO46Q6PJ61 603 aaPredicted RBP16.83■□□□□ 0.28
TNFRSF1A-202ENST00000366159 DDTLA6NHG4 134 aaPredicted RBP16.82■□□□□ 0.28
TNFRSF1A-202ENST00000366159 MAP4K4O95819 1239 aaPredicted RBP16.82■□□□□ 0.28
TNFRSF1A-202ENST00000366159 ZCCHC17Q9NP64 241 aaKnown RBP16.82■□□□□ 0.28
TNFRSF1A-202ENST00000366159 KCNH4Q9UQ05 1017 aa16.82■□□□□ 0.28
TNFRSF1A-202ENST00000366159 DOCK2Q92608 1830 aa16.82■□□□□ 0.28
TNFRSF1A-202ENST00000366159 CETPP11597 493 aa16.81■□□□□ 0.28
TNFRSF1A-202ENST00000366159 SNAPC2Q13487 334 aa16.81■□□□□ 0.28
TNFRSF1A-202ENST00000366159 OTOP1Q7RTM1 612 aa16.81■□□□□ 0.28
TNFRSF1A-202ENST00000366159 EAF2Q96CJ1 260 aaPredicted RBP16.81■□□□□ 0.28
TNFRSF1A-202ENST00000366159 DBNLQ9UJU6 430 aaKnown RBP16.81■□□□□ 0.28
TNFRSF1A-202ENST00000366159 AK9Q5TCS8 1911 aa16.81■□□□□ 0.28
TNFRSF1A-202ENST00000366159 CENPFP49454 3210 aa16.8■□□□□ 0.28
TNFRSF1A-202ENST00000366159 BTBD19C9JJ37 291 aa16.8■□□□□ 0.28
TNFRSF1A-202ENST00000366159 IGSF3O75054 1194 aa16.8■□□□□ 0.28
TNFRSF1A-202ENST00000366159 CYP2E1P05181 493 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF1A-202ENST00000366159 LDHCP07864 332 aa16.8■□□□□ 0.28
TNFRSF1A-202ENST00000366159 GSTO1P78417 241 aa16.8■□□□□ 0.28
TNFRSF1A-202ENST00000366159 MOGSQ13724 837 aa16.8■□□□□ 0.28
TNFRSF1A-202ENST00000366159 CCDC158Q5M9N0 1113 aa16.8■□□□□ 0.28
TNFRSF1A-202ENST00000366159 COL2A1P02458 1487 aaPredicted RBP16.79■□□□□ 0.28
TNFRSF1A-202ENST00000366159 SLURP2P0DP57 97 aa16.79■□□□□ 0.28
TNFRSF1A-202ENST00000366159 MS4A1P11836 297 aa16.79■□□□□ 0.28
TNFRSF1A-202ENST00000366159 SP3Q02447 781 aa16.79■□□□□ 0.28
TNFRSF1A-202ENST00000366159 MLLT1Q03111 559 aaPredicted RBP16.79■□□□□ 0.28
TNFRSF1A-202ENST00000366159 OS9Q13438 667 aaPredicted RBP16.79■□□□□ 0.28
TNFRSF1A-202ENST00000366159 TTC39AQ5SRH9 613 aa16.79■□□□□ 0.28
TNFRSF1A-202ENST00000366159 ERO1AQ96HE7 468 aa16.79■□□□□ 0.28
TNFRSF1A-202ENST00000366159 ZFYVE28Q9HCC9 887 aa16.79■□□□□ 0.28
TNFRSF1A-202ENST00000366159 SNRKQ9NRH2 765 aa16.79■□□□□ 0.28
TNFRSF1A-202ENST00000366159 ZBTB40Q9NUA8 1239 aa16.79■□□□□ 0.28
TNFRSF1A-202ENST00000366159 TLR7Q9NYK1 1049 aaKnown RBP16.79■□□□□ 0.28
TNFRSF1A-202ENST00000366159 RAI14Q9P0K7 980 aa16.79■□□□□ 0.28
TNFRSF1A-202ENST00000366159 TBC1D12O60347 775 aa16.78■□□□□ 0.28
TNFRSF1A-202ENST00000366159 TAF1CQ15572 869 aaPredicted RBP16.78■□□□□ 0.28
TNFRSF1A-202ENST00000366159 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.78■□□□□ 0.28
TNFRSF1A-202ENST00000366159 CD99L2Q8TCZ2 262 aa16.78■□□□□ 0.28
TNFRSF1A-202ENST00000366159 CCDC8Q9H0W5 538 aaPredicted RBP16.78■□□□□ 0.28
TNFRSF1A-202ENST00000366159 LRP2BPQ9P2M1 347 aa16.78■□□□□ 0.28
TNFRSF1A-202ENST00000366159 TRIM17Q9Y577 477 aa16.78■□□□□ 0.28
TNFRSF1A-202ENST00000366159 MYO5AQ9Y4I1 1855 aaKnown RBP16.78■□□□□ 0.28
TNFRSF1A-202ENST00000366159 MAST2Q6P0Q8 1798 aa16.78■□□□□ 0.28
TNFRSF1A-202ENST00000366159 TLR2O60603 784 aa16.77■□□□□ 0.28
TNFRSF1A-202ENST00000366159 ZAP70P43403 619 aa16.77■□□□□ 0.28
TNFRSF1A-202ENST00000366159 PPP4CP60510 307 aa16.77■□□□□ 0.28
TNFRSF1A-202ENST00000366159 PICALMQ13492 652 aa16.77■□□□□ 0.28
TNFRSF1A-202ENST00000366159 ANKRD23Q86SG2 305 aa16.77■□□□□ 0.28
TNFRSF1A-202ENST00000366159 SIRT2Q8IXJ6 389 aa16.77■□□□□ 0.28
TNFRSF1A-202ENST00000366159 SCYL3Q8IZE3 742 aa16.77■□□□□ 0.28
TNFRSF1A-202ENST00000366159 EXOC6BQ9Y2D4 811 aa16.77■□□□□ 0.28
TNFRSF1A-202ENST00000366159 PTPN22Q9Y2R2 807 aa16.77■□□□□ 0.28
TNFRSF1A-202ENST00000366159 CXCL11O14625 94 aa16.76■□□□□ 0.27
TNFRSF1A-202ENST00000366159 PTPRAP18433 802 aa16.76■□□□□ 0.27
TNFRSF1A-202ENST00000366159 SOX10P56693 466 aa16.76■□□□□ 0.27
TNFRSF1A-202ENST00000366159 ADGRA1Q86SQ6 560 aa16.76■□□□□ 0.27
TNFRSF1A-202ENST00000366159 RPAP2Q8IXW5 612 aaPredicted RBP16.76■□□□□ 0.27
TNFRSF1A-202ENST00000366159 OSBPL5Q9H0X9 879 aaPredicted RBP16.76■□□□□ 0.27
TNFRSF1A-202ENST00000366159 RCAN3Q9UKA8 241 aa16.76■□□□□ 0.27
TNFRSF1A-202ENST00000366159 DDX19BQ9UMR2 479 aa16.76■□□□□ 0.27
TNFRSF1A-202ENST00000366159 COG6Q9Y2V7 657 aa16.76■□□□□ 0.27
TNFRSF1A-202ENST00000366159 AFG3L2Q9Y4W6 797 aa16.76■□□□□ 0.27
TNFRSF1A-202ENST00000366159 PHIPQ8WWQ0 1821 aa16.76■□□□□ 0.27
TNFRSF1A-202ENST00000366159 CTNND1O60716 968 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1A-202ENST00000366159 NAA16Q6N069 864 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF1A-202ENST00000366159 ERC1Q8IUD2 1116 aa16.75■□□□□ 0.27
TNFRSF1A-202ENST00000366159 ZSCAN29Q8IWY8 852 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF1A-202ENST00000366159 SH3RF3Q8TEJ3 882 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF1A-202ENST00000366159 PIH1D3Q9NQM4 214 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1A-202ENST00000366159 ADGRA2Q96PE1 1338 aa16.75■□□□□ 0.27
TNFRSF1A-202ENST00000366159 DOCK1Q14185 1865 aa16.74■□□□□ 0.27
TNFRSF1A-202ENST00000366159 GPAT2Q6NUI2 795 aa16.74■□□□□ 0.27
TNFRSF1A-202ENST00000366159 C17orf99Q6UX52 265 aa16.74■□□□□ 0.27
TNFRSF1A-202ENST00000366159 RHPN1Q8TCX5 695 aa16.74■□□□□ 0.27
TNFRSF1A-202ENST00000366159 EFCC1Q9HA90 598 aa16.74■□□□□ 0.27
TNFRSF1A-202ENST00000366159 ZHX2Q9Y6X8 837 aa16.74■□□□□ 0.27
TNFRSF1A-202ENST00000366159 CDK5RAP2Q96SN8 1893 aa16.74■□□□□ 0.27
TNFRSF1A-202ENST00000366159 BRCA2P51587 3418 aa16.74■□□□□ 0.27
TNFRSF1A-202ENST00000366159 A0A0G2JLL6 359 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1A-202ENST00000366159 PDHXO00330 501 aa16.73■□□□□ 0.27
TNFRSF1A-202ENST00000366159 HSP90AB4PQ58FF6 505 aa16.73■□□□□ 0.27
TNFRSF1A-202ENST00000366159 PRRT2Q7Z6L0 340 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1A-202ENST00000366159 METTL16Q86W50 562 aaKnown RBP16.73■□□□□ 0.27
TNFRSF1A-202ENST00000366159 TEX11Q8IYF3 940 aa16.73■□□□□ 0.27
TNFRSF1A-202ENST00000366159 AATFQ9NY61 560 aaKnown RBP eCLIP16.73■□□□□ 0.27
TNFRSF1A-202ENST00000366159 SIPA1L1O43166 1804 aa16.73■□□□□ 0.27
TNFRSF1A-202ENST00000366159 FOCADQ5VW36 1801 aa16.73■□□□□ 0.27
TNFRSF1A-202ENST00000366159 BAG3O95817 575 aa16.72■□□□□ 0.27
TNFRSF1A-202ENST00000366159 PDE3AQ14432 1141 aa16.72■□□□□ 0.27
TNFRSF1A-202ENST00000366159 RRP1BQ14684 758 aaKnown RBP16.72■□□□□ 0.27
TNFRSF1A-202ENST00000366159 PTPRFP10586 1907 aa16.72■□□□□ 0.27
TNFRSF1A-202ENST00000366159 FAM196BA6NMK8 535 aa16.71■□□□□ 0.27
TNFRSF1A-202ENST00000366159 PLCG2P16885 1265 aa16.71■□□□□ 0.27
TNFRSF1A-202ENST00000366159 LACTBP83111 547 aaPredicted RBP16.71■□□□□ 0.27
TNFRSF1A-202ENST00000366159 C20orf194Q5TEA3 1177 aa16.71■□□□□ 0.27
TNFRSF1A-202ENST00000366159 AACSQ86V21 672 aa16.71■□□□□ 0.27
TNFRSF1A-202ENST00000366159 ARMC5Q96C12 935 aa16.71■□□□□ 0.27
TNFRSF1A-202ENST00000366159 ARHGAP39Q9C0H5 1083 aa16.71■□□□□ 0.27
TNFRSF1A-202ENST00000366159 ANTXR1Q9H6X2 564 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms