RNA–Protein interactions for RNA: ENST00000361726.6

GJB1-201, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-201ENST00000361726 GOLGB1Q14789 3259 aaKnown RBP16.6■□□□□ 0.25
GJB1-201ENST00000361726 USP17L12C9JPN9 530 aa16.6■□□□□ 0.25
GJB1-201ENST00000361726 USP17L21D6R901 530 aa16.6■□□□□ 0.25
GJB1-201ENST00000361726 RAB3GAP1Q15042 981 aa16.6■□□□□ 0.25
GJB1-201ENST00000361726 DACT2Q5SW24 774 aa16.6■□□□□ 0.25
GJB1-201ENST00000361726 SOGA3Q5TF21 947 aa16.6■□□□□ 0.25
GJB1-201ENST00000361726 CERS3Q8IU89 383 aa16.6■□□□□ 0.25
GJB1-201ENST00000361726 ZNF277Q9NRM2 450 aaPredicted RBP16.6■□□□□ 0.25
GJB1-201ENST00000361726 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.6■□□□□ 0.25
GJB1-201ENST00000361726 USP17L3A6NCW0 530 aa16.59■□□□□ 0.25
GJB1-201ENST00000361726 USP17L4A6NCW7 530 aa16.59■□□□□ 0.25
GJB1-201ENST00000361726 SCNN1DP51172 638 aa16.59■□□□□ 0.25
GJB1-201ENST00000361726 EVX2Q03828 476 aa16.59■□□□□ 0.25
GJB1-201ENST00000361726 RRP12Q5JTH9 1297 aaKnown RBP16.59■□□□□ 0.25
GJB1-201ENST00000361726 USP17L1Q7RTZ2 530 aa16.59■□□□□ 0.25
GJB1-201ENST00000361726 FBXL16Q8N461 479 aa16.59■□□□□ 0.25
GJB1-201ENST00000361726 KRT23Q9C075 422 aa16.59■□□□□ 0.25
GJB1-201ENST00000361726 RNF41Q9H4P4 317 aaPredicted RBP16.59■□□□□ 0.25
GJB1-201ENST00000361726 TOMM22Q9NS69 142 aa16.59■□□□□ 0.25
GJB1-201ENST00000361726 ARPP21Q9UBL0 812 aaPredicted RBP16.59■□□□□ 0.25
GJB1-201ENST00000361726 MYH8P13535 1937 aa16.59■□□□□ 0.25
GJB1-201ENST00000361726 YDJCA8MPS7 323 aa16.59■□□□□ 0.25
GJB1-201ENST00000361726 DTNBO60941 627 aa16.59■□□□□ 0.25
GJB1-201ENST00000361726 KDM4AO75164 1064 aa16.59■□□□□ 0.25
GJB1-201ENST00000361726 CYP2D6P10635 497 aa16.59■□□□□ 0.25
GJB1-201ENST00000361726 PLCG2P16885 1265 aa16.59■□□□□ 0.25
GJB1-201ENST00000361726 FKBP1AP62942 108 aaKnown RBP16.59■□□□□ 0.25
GJB1-201ENST00000361726 PKP1Q13835 747 aa16.59■□□□□ 0.25
GJB1-201ENST00000361726 NBR1Q14596 966 aa16.59■□□□□ 0.25
GJB1-201ENST00000361726 TEX11Q8IYF3 940 aa16.59■□□□□ 0.25
GJB1-201ENST00000361726 TGFBRAP1Q8WUH2 860 aa16.59■□□□□ 0.25
GJB1-201ENST00000361726 GTF3C6Q969F1 213 aa16.59■□□□□ 0.25
GJB1-201ENST00000361726 MCM9Q9NXL9 1143 aa16.59■□□□□ 0.25
GJB1-201ENST00000361726 MKRN1Q9UHC7 482 aaKnown RBP16.59■□□□□ 0.25
GJB1-201ENST00000361726 SMC3Q9UQE7 1217 aa16.59■□□□□ 0.25
GJB1-201ENST00000361726 USP17L8P0C7I0 530 aa16.58■□□□□ 0.24
GJB1-201ENST00000361726 RHBDL3P58872 404 aa16.58■□□□□ 0.24
GJB1-201ENST00000361726 NFKBIBQ15653 356 aa16.58■□□□□ 0.24
GJB1-201ENST00000361726 SLC4A8Q2Y0W8 1093 aa16.58■□□□□ 0.24
GJB1-201ENST00000361726 SBK1Q52WX2 424 aa16.58■□□□□ 0.24
GJB1-201ENST00000361726 LARGE2Q8N3Y3 721 aa16.58■□□□□ 0.24
GJB1-201ENST00000361726 NAP1L2Q9ULW6 460 aaPredicted RBP16.58■□□□□ 0.24
GJB1-201ENST00000361726 SH2B2O14492 632 aaPredicted RBP16.57■□□□□ 0.24
GJB1-201ENST00000361726 PFKFB2O60825 505 aa16.57■□□□□ 0.24
GJB1-201ENST00000361726 NUCB2P80303 420 aa16.57■□□□□ 0.24
GJB1-201ENST00000361726 KIAA0825Q8IV33 1275 aa16.57■□□□□ 0.24
GJB1-201ENST00000361726 MAPKAPK5Q8IW41 473 aa16.57■□□□□ 0.24
GJB1-201ENST00000361726 TNPO1Q92973 898 aaKnown RBP16.57■□□□□ 0.24
GJB1-201ENST00000361726 ZSWIM5Q9P217 1185 aa16.57■□□□□ 0.24
GJB1-201ENST00000361726 GJB2P29033 226 aa16.56■□□□□ 0.24
GJB1-201ENST00000361726 TEKT1Q969V4 418 aa16.56■□□□□ 0.24
GJB1-201ENST00000361726 TMEM87BQ96K49 555 aa16.56■□□□□ 0.24
GJB1-201ENST00000361726 BRPF3Q9ULD4 1205 aa16.56■□□□□ 0.24
GJB1-201ENST00000361726 ANGEL1Q9UNK9 670 aaKnown RBP16.56■□□□□ 0.24
GJB1-201ENST00000361726 FLT1P17948 1338 aa16.56■□□□□ 0.24
GJB1-201ENST00000361726 KLF18A0A0U1RQI7 1052 aa16.56■□□□□ 0.24
GJB1-201ENST00000361726 PDIA3P30101 505 aaKnown RBP16.56■□□□□ 0.24
GJB1-201ENST00000361726 CRKP46108 304 aa16.56■□□□□ 0.24
GJB1-201ENST00000361726 EVCP57679 992 aa16.56■□□□□ 0.24
GJB1-201ENST00000361726 SCRN1Q12765 414 aa16.56■□□□□ 0.24
GJB1-201ENST00000361726 HHIPL2Q6UWX4 724 aa16.56■□□□□ 0.24
GJB1-201ENST00000361726 NLGN2Q8NFZ4 835 aa16.56■□□□□ 0.24
GJB1-201ENST00000361726 ZNF274Q96GC6 653 aaPredicted RBP16.56■□□□□ 0.24
GJB1-201ENST00000361726 SAP30BPQ9UHR5 308 aaKnown RBP16.56■□□□□ 0.24
GJB1-201ENST00000361726 ROBO3Q96MS0 1386 aa16.55■□□□□ 0.24
GJB1-201ENST00000361726 FGRP09769 529 aa16.55■□□□□ 0.24
GJB1-201ENST00000361726 PCP11498 1178 aaKnown RBP16.55■□□□□ 0.24
GJB1-201ENST00000361726 IARSP41252 1262 aaKnown RBP16.55■□□□□ 0.24
GJB1-201ENST00000361726 TMEM67Q5HYA8 995 aa16.55■□□□□ 0.24
GJB1-201ENST00000361726 C12orf60Q5U649 245 aa16.55■□□□□ 0.24
GJB1-201ENST00000361726 IGDCC4Q8TDY8 1250 aa16.55■□□□□ 0.24
GJB1-201ENST00000361726 VPS33BQ9H267 617 aa16.55■□□□□ 0.24
GJB1-201ENST00000361726 LY9Q9HBG7 655 aa16.55■□□□□ 0.24
GJB1-201ENST00000361726 SENP2Q9HC62 589 aa16.55■□□□□ 0.24
GJB1-201ENST00000361726 BCS1LQ9Y276 419 aa16.55■□□□□ 0.24
GJB1-201ENST00000361726 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.55■□□□□ 0.24
GJB1-201ENST00000361726 ZDHHC9Q9Y397 364 aa16.55■□□□□ 0.24
GJB1-201ENST00000361726 GOLGA8BA8MQT2 603 aa16.54■□□□□ 0.24
GJB1-201ENST00000361726 IFIT3O14879 490 aaKnown RBP16.54■□□□□ 0.24
GJB1-201ENST00000361726 PRDM1O75626 825 aa16.54■□□□□ 0.24
GJB1-201ENST00000361726 SLC3A2P08195 630 aaKnown RBP16.54■□□□□ 0.24
GJB1-201ENST00000361726 CCT2P78371 535 aaKnown RBP16.54■□□□□ 0.24
GJB1-201ENST00000361726 AMOTL1Q8IY63 956 aa16.54■□□□□ 0.24
GJB1-201ENST00000361726 NIM1KQ8IY84 436 aa16.54■□□□□ 0.24
GJB1-201ENST00000361726 ESR2Q92731 530 aa16.54■□□□□ 0.24
GJB1-201ENST00000361726 ZKSCAN3Q9BRR0 538 aa16.54■□□□□ 0.24
GJB1-201ENST00000361726 TAOK3Q9H2K8 898 aa16.54■□□□□ 0.24
GJB1-201ENST00000361726 NCOA5Q9HCD5 579 aaKnown RBP16.54■□□□□ 0.24
GJB1-201ENST00000361726 NFKBIEO00221 500 aa16.53■□□□□ 0.24
GJB1-201ENST00000361726 ORC4O43929 436 aa16.53■□□□□ 0.24
GJB1-201ENST00000361726 RAD17O75943 681 aa16.53■□□□□ 0.24
GJB1-201ENST00000361726 RAB11FIP4Q86YS3 637 aa16.53■□□□□ 0.24
GJB1-201ENST00000361726 ZDHHC15Q96MV8 337 aa16.53■□□□□ 0.24
GJB1-201ENST00000361726 SPON1Q9HCB6 807 aa16.53■□□□□ 0.24
GJB1-201ENST00000361726 PCDHAC2Q9Y5I4 1007 aa16.53■□□□□ 0.24
GJB1-201ENST00000361726 RANBP6O60518 1105 aaKnown RBP16.52■□□□□ 0.24
GJB1-201ENST00000361726 JAK2O60674 1132 aa16.52■□□□□ 0.24
GJB1-201ENST00000361726 POLR3DP05423 398 aaPredicted RBP16.52■□□□□ 0.24
GJB1-201ENST00000361726 HDLBPQ00341 1268 aaKnown RBP16.52■□□□□ 0.24
GJB1-201ENST00000361726 FOXD4L5Q5VV16 416 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms