RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 NEK11Q8NG66 645 aa20.95■□□□□ 0.95
CLIP2-202ENST00000361545 USP17L12C9JPN9 530 aa20.95■□□□□ 0.94
CLIP2-202ENST00000361545 USP17L21D6R901 530 aa20.95■□□□□ 0.94
CLIP2-202ENST00000361545 GCOM1H8Y6P7 765 aaPredicted RBP20.95■□□□□ 0.94
CLIP2-202ENST00000361545 NOP56O00567 594 aaKnown RBP20.95■□□□□ 0.94
CLIP2-202ENST00000361545 MYZAPP0CAP1 466 aa20.95■□□□□ 0.94
CLIP2-202ENST00000361545 CEP135Q66GS9 1140 aa20.95■□□□□ 0.94
CLIP2-202ENST00000361545 ZBTB1Q9Y2K1 713 aa20.95■□□□□ 0.94
CLIP2-202ENST00000361545 ARHGEF5Q12774 1597 aa20.95■□□□□ 0.94
CLIP2-202ENST00000361545 MAP3K15Q6ZN16 1313 aa20.95■□□□□ 0.94
CLIP2-202ENST00000361545 EEF2P13639 858 aaKnown RBP20.95■□□□□ 0.94
CLIP2-202ENST00000361545 PLVAPQ9BX97 442 aa20.95■□□□□ 0.94
CLIP2-202ENST00000361545 TARBP1Q13395 1621 aaKnown RBP20.95■□□□□ 0.94
CLIP2-202ENST00000361545 PCCAP05165 728 aaPredicted RBP20.95■□□□□ 0.94
CLIP2-202ENST00000361545 UBE4AQ14139 1066 aa20.95■□□□□ 0.94
CLIP2-202ENST00000361545 PROSER3Q2NL68 480 aa20.95■□□□□ 0.94
CLIP2-202ENST00000361545 PLCD1P51178 756 aa20.94■□□□□ 0.94
CLIP2-202ENST00000361545 ADCY7P51828 1080 aa20.94■□□□□ 0.94
CLIP2-202ENST00000361545 NCAPH2Q6IBW4 605 aa20.94■□□□□ 0.94
CLIP2-202ENST00000361545 MAEAQ7L5Y9 396 aa20.94■□□□□ 0.94
CLIP2-202ENST00000361545 GPHNQ9NQX3 736 aaPredicted RBP20.94■□□□□ 0.94
CLIP2-202ENST00000361545 FAM135BQ49AJ0 1406 aa20.94■□□□□ 0.94
CLIP2-202ENST00000361545 TRAF5O00463 557 aa20.94■□□□□ 0.94
CLIP2-202ENST00000361545 CALRP27797 417 aaKnown RBP20.94■□□□□ 0.94
CLIP2-202ENST00000361545 FAM196AQ6ZSG2 479 aa20.94■□□□□ 0.94
CLIP2-202ENST00000361545 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.94■□□□□ 0.94
CLIP2-202ENST00000361545 ERICH4A6NGS2 130 aa20.94■□□□□ 0.94
CLIP2-202ENST00000361545 CHRNDQ07001 517 aa20.94■□□□□ 0.94
CLIP2-202ENST00000361545 NLGN1Q8N2Q7 840 aa20.94■□□□□ 0.94
CLIP2-202ENST00000361545 PLCD4Q9BRC7 762 aa20.94■□□□□ 0.94
CLIP2-202ENST00000361545 RXRBP28702 533 aa20.94■□□□□ 0.94
CLIP2-202ENST00000361545 PPARAQ07869 468 aa20.94■□□□□ 0.94
CLIP2-202ENST00000361545 BEND3Q5T5X7 828 aa20.94■□□□□ 0.94
CLIP2-202ENST00000361545 KIFC2Q96AC6 838 aa20.94■□□□□ 0.94
CLIP2-202ENST00000361545 EAF2Q96CJ1 260 aaPredicted RBP20.94■□□□□ 0.94
CLIP2-202ENST00000361545 GREM2Q9H772 168 aa20.94■□□□□ 0.94
CLIP2-202ENST00000361545 MLH3Q9UHC1 1453 aa20.94■□□□□ 0.94
CLIP2-202ENST00000361545 ANO1Q5XXA6 986 aa20.93■□□□□ 0.94
CLIP2-202ENST00000361545 CCDC42Q96M95 316 aa20.93■□□□□ 0.94
CLIP2-202ENST00000361545 TCP10L2B9ZVM9 353 aa20.93■□□□□ 0.94
CLIP2-202ENST00000361545 IRX3P78415 501 aaPredicted RBP20.93■□□□□ 0.94
CLIP2-202ENST00000361545 ATP2B4P23634 1241 aa20.93■□□□□ 0.94
CLIP2-202ENST00000361545 BIRC3Q13489 604 aa20.93■□□□□ 0.94
CLIP2-202ENST00000361545 RAPGEF1Q13905 1077 aa20.93■□□□□ 0.94
CLIP2-202ENST00000361545 GOLGA6L10A0A0M3HER8 536 aa20.93■□□□□ 0.94
CLIP2-202ENST00000361545 BRDTQ58F21 947 aaPredicted RBP20.93■□□□□ 0.94
CLIP2-202ENST00000361545 KCNJ14Q9UNX9 436 aa20.93■□□□□ 0.94
CLIP2-202ENST00000361545 ELP1O95163 1332 aa20.93■□□□□ 0.94
CLIP2-202ENST00000361545 RPL13P26373 211 aaKnown RBP20.92■□□□□ 0.94
CLIP2-202ENST00000361545 MAATS1Q7Z4T9 603 aa20.92■□□□□ 0.94
CLIP2-202ENST00000361545 SMCR8Q8TEV9 937 aaPredicted RBP20.92■□□□□ 0.94
CLIP2-202ENST00000361545 SDR42E1Q8WUS8 393 aa20.92■□□□□ 0.94
CLIP2-202ENST00000361545 PDE4DQ08499 809 aa20.92■□□□□ 0.94
CLIP2-202ENST00000361545 TTC38Q5R3I4 469 aa20.92■□□□□ 0.94
CLIP2-202ENST00000361545 HAUS3Q68CZ6 603 aa20.92■□□□□ 0.94
CLIP2-202ENST00000361545 MAPK8IP1Q9UQF2 711 aa20.92■□□□□ 0.94
CLIP2-202ENST00000361545 E7EWF7 191 aa20.92■□□□□ 0.94
CLIP2-202ENST00000361545 NONOQ15233 471 aaKnown RBP eCLIP20.92■□□□□ 0.94
CLIP2-202ENST00000361545 KDM5DQ9BY66 1539 aa20.91■□□□□ 0.94
CLIP2-202ENST00000361545 IFNKQ9P0W0 207 aa20.91■□□□□ 0.94
CLIP2-202ENST00000361545 DNAI1Q9UI46 699 aa20.91■□□□□ 0.94
CLIP2-202ENST00000361545 FRMD4BQ9Y2L6 1034 aa20.91■□□□□ 0.94
CLIP2-202ENST00000361545 SSH3Q8TE77 659 aa20.91■□□□□ 0.94
CLIP2-202ENST00000361545 FNBP1Q96RU3 617 aa20.91■□□□□ 0.94
CLIP2-202ENST00000361545 ARPP21Q9UBL0 812 aaPredicted RBP20.91■□□□□ 0.94
CLIP2-202ENST00000361545 KDM5AP29375 1690 aaKnown RBP20.91■□□□□ 0.94
CLIP2-202ENST00000361545 FSD2A1L4K1 749 aa20.91■□□□□ 0.94
CLIP2-202ENST00000361545 LLPHQ9BRT6 129 aaKnown RBP20.91■□□□□ 0.94
CLIP2-202ENST00000361545 WDR17Q8IZU2 1322 aa20.91■□□□□ 0.94
CLIP2-202ENST00000361545 TAF12Q16514 161 aa20.91■□□□□ 0.94
CLIP2-202ENST00000361545 GLT8D2Q9H1C3 349 aa20.91■□□□□ 0.94
CLIP2-202ENST00000361545 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.91■□□□□ 0.94
CLIP2-202ENST00000361545 PRAMEF22A3QJZ6 481 aa20.9■□□□□ 0.94
CLIP2-202ENST00000361545 ARID4AP29374 1257 aaPredicted RBP20.9■□□□□ 0.94
CLIP2-202ENST00000361545 SMTNP53814 917 aa20.9■□□□□ 0.94
CLIP2-202ENST00000361545 SEC62Q99442 399 aaKnown RBP20.9■□□□□ 0.94
CLIP2-202ENST00000361545 ADGBQ8N7X0 1667 aa20.9■□□□□ 0.94
CLIP2-202ENST00000361545 FAM160A1Q05DH4 1040 aa20.9■□□□□ 0.94
CLIP2-202ENST00000361545 CNKSR1Q969H4 720 aa20.9■□□□□ 0.94
CLIP2-202ENST00000361545 KCNH3Q9ULD8 1083 aa20.9■□□□□ 0.94
CLIP2-202ENST00000361545 CSADQ9Y600 493 aa20.9■□□□□ 0.94
CLIP2-202ENST00000361545 ABCC4O15439 1325 aa20.9■□□□□ 0.94
CLIP2-202ENST00000361545 ARHGEF35A5YM69 484 aa20.9■□□□□ 0.94
CLIP2-202ENST00000361545 POLR3GO15318 223 aaPredicted RBP20.9■□□□□ 0.94
CLIP2-202ENST00000361545 DPY19L2Q6NUT2 758 aa20.9■□□□□ 0.94
CLIP2-202ENST00000361545 ABCA8O94911 1581 aa20.9■□□□□ 0.94
CLIP2-202ENST00000361545 TNFAIP1Q13829 316 aa20.9■□□□□ 0.94
CLIP2-202ENST00000361545 ZNF772Q68DY9 489 aaPredicted RBP20.9■□□□□ 0.94
CLIP2-202ENST00000361545 ATL3Q6DD88 541 aa20.9■□□□□ 0.94
CLIP2-202ENST00000361545 BEGAINQ9BUH8 593 aa20.9■□□□□ 0.94
CLIP2-202ENST00000361545 GTPBP4Q9BZE4 634 aaKnown RBP20.9■□□□□ 0.94
CLIP2-202ENST00000361545 CTNND2Q9UQB3 1225 aa20.9■□□□□ 0.94
CLIP2-202ENST00000361545 ERBB4Q15303 1308 aa20.89■□□□□ 0.94
CLIP2-202ENST00000361545 KRT27Q7Z3Y8 459 aa20.89■□□□□ 0.94
CLIP2-202ENST00000361545 SAMD9LQ8IVG5 1584 aa20.89■□□□□ 0.94
CLIP2-202ENST00000361545 TACC1O75410 805 aa20.89■□□□□ 0.93
CLIP2-202ENST00000361545 KIF5AQ12840 1032 aa20.89■□□□□ 0.93
CLIP2-202ENST00000361545 KRT40Q6A162 431 aa20.89■□□□□ 0.93
CLIP2-202ENST00000361545 VPS54Q9P1Q0 977 aa20.89■□□□□ 0.93
CLIP2-202ENST00000361545 PDE6AP16499 860 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms