RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 TEX11Q8IYF3 940 aa13.69□□□□□ -0.22
CCDC144A-204ENST00000360524 SH2D4AQ9H788 454 aa13.69□□□□□ -0.22
CCDC144A-204ENST00000360524 FEZ2Q9UHY8 353 aaPredicted RBP13.69□□□□□ -0.22
CCDC144A-204ENST00000360524 MAST1Q9Y2H9 1570 aa13.69□□□□□ -0.22
CCDC144A-204ENST00000360524 BUB1BO60566 1050 aaPredicted RBP13.69□□□□□ -0.22
CCDC144A-204ENST00000360524 UFL1O94874 794 aa13.69□□□□□ -0.22
CCDC144A-204ENST00000360524 LRRC45Q96CN5 670 aa13.69□□□□□ -0.22
CCDC144A-204ENST00000360524 DDX23Q9BUQ8 820 aaKnown RBP13.69□□□□□ -0.22
CCDC144A-204ENST00000360524 SSX2IPQ9Y2D8 614 aa13.69□□□□□ -0.22
CCDC144A-204ENST00000360524 PCK1P35558 622 aa13.69□□□□□ -0.22
CCDC144A-204ENST00000360524 TNNI3KQ59H18 835 aa13.69□□□□□ -0.22
CCDC144A-204ENST00000360524 G2E3Q7L622 706 aa13.69□□□□□ -0.22
CCDC144A-204ENST00000360524 PPFIBP2Q8ND30 876 aa13.69□□□□□ -0.22
CCDC144A-204ENST00000360524 MRRFQ96E11 262 aaKnown RBP13.69□□□□□ -0.22
CCDC144A-204ENST00000360524 SMC6Q96SB8 1091 aa13.69□□□□□ -0.22
CCDC144A-204ENST00000360524 SEC62Q99442 399 aaKnown RBP13.69□□□□□ -0.22
CCDC144A-204ENST00000360524 STIM2Q9P246 746 aa13.69□□□□□ -0.22
CCDC144A-204ENST00000360524 MAPK8IP1Q9UQF2 711 aa13.69□□□□□ -0.22
CCDC144A-204ENST00000360524 FPGT-TNNI3KV9GXZ4 949 aa13.69□□□□□ -0.22
CCDC144A-204ENST00000360524 ELF2Q15723 593 aa13.68□□□□□ -0.22
CCDC144A-204ENST00000360524 LMNTD2Q8IXW0 634 aa13.68□□□□□ -0.22
CCDC144A-204ENST00000360524 VPS16Q9H269 839 aa13.68□□□□□ -0.22
CCDC144A-204ENST00000360524 FAM170AA1A519 330 aa13.68□□□□□ -0.22
CCDC144A-204ENST00000360524 NDUFAB1O14561 156 aa13.68□□□□□ -0.22
CCDC144A-204ENST00000360524 PDE8AO60658 829 aa13.68□□□□□ -0.22
CCDC144A-204ENST00000360524 HIBADHP31937 336 aaKnown RBP13.68□□□□□ -0.22
CCDC144A-204ENST00000360524 HPDP32754 393 aaPredicted RBP13.68□□□□□ -0.22
CCDC144A-204ENST00000360524 IL13P35225 146 aa13.68□□□□□ -0.22
CCDC144A-204ENST00000360524 HS2ST1Q7LGA3 356 aa13.68□□□□□ -0.22
CCDC144A-204ENST00000360524 INTS4Q96HW7 963 aaKnown RBP13.68□□□□□ -0.22
CCDC144A-204ENST00000360524 LUC7L2Q9Y383 392 aaKnown RBP13.68□□□□□ -0.22
CCDC144A-204ENST00000360524 SH3TC1Q8TE82 1336 aa13.68□□□□□ -0.22
CCDC144A-204ENST00000360524 HOXB7P09629 217 aa13.68□□□□□ -0.22
CCDC144A-204ENST00000360524 ZBTB7BO15156 539 aaPredicted RBP13.68□□□□□ -0.22
CCDC144A-204ENST00000360524 UNC13AQ9UPW8 1703 aa13.68□□□□□ -0.22
CCDC144A-204ENST00000360524 ABCC2Q92887 1545 aa13.67□□□□□ -0.22
CCDC144A-204ENST00000360524 COL17A1Q9UMD9 1497 aaPredicted RBP13.67□□□□□ -0.22
CCDC144A-204ENST00000360524 SETSIPP0DME0 302 aa13.67□□□□□ -0.22
CCDC144A-204ENST00000360524 ATP6V0A2Q9Y487 856 aa13.67□□□□□ -0.22
CCDC144A-204ENST00000360524 UAP1Q16222 522 aaPredicted RBP13.67□□□□□ -0.22
CCDC144A-204ENST00000360524 NCOA5Q9HCD5 579 aaKnown RBP13.67□□□□□ -0.22
CCDC144A-204ENST00000360524 ELP1O95163 1332 aa13.67□□□□□ -0.22
CCDC144A-204ENST00000360524 RPS6KB1P23443 525 aa13.67□□□□□ -0.22
CCDC144A-204ENST00000360524 IQUBQ8NA54 791 aa13.67□□□□□ -0.22
CCDC144A-204ENST00000360524 SWAP70Q9UH65 585 aa13.67□□□□□ -0.22
CCDC144A-204ENST00000360524 KRT5P13647 590 aa13.67□□□□□ -0.22
CCDC144A-204ENST00000360524 LETM2Q2VYF4 491 aa13.67□□□□□ -0.22
CCDC144A-204ENST00000360524 FAM173BQ6P4H8 233 aa13.67□□□□□ -0.22
CCDC144A-204ENST00000360524 TSGA10Q9BZW7 698 aa13.67□□□□□ -0.22
CCDC144A-204ENST00000360524 ATP2A1O14983 1001 aa13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 ATP11AP98196 1134 aa13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 MYL5Q02045 173 aa13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 CFAP58Q5T655 872 aa13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 NOC4LQ9BVI4 516 aaKnown RBP13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 SLC52A2Q9HAB3 445 aa13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 B4E1Z4 1266 aa13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 VAV2P52735 878 aa13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 TIMM10P62072 90 aa13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 XAGE2Q96GT9 111 aa13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 UIMC1Q96RL1 719 aa13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 ATL3Q6DD88 541 aa13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 IGSF22Q8N9C0 903 aa13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 UHRF1BP1Q6BDS2 1440 aa13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 SLC27A2O14975 620 aa13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 NOL3O60936 208 aaKnown RBP13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 SETDB1Q15047 1291 aa13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 TMEM87BQ96K49 555 aa13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 PPP1R12CQ9BZL4 782 aa13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 ARMT1Q9H993 441 aa13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 STK32BQ9NY57 414 aa13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 GGA1Q9UJY5 639 aa13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 ERCC3P19447 782 aa13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 RAB3IL1Q8TBN0 382 aa13.66□□□□□ -0.22
CCDC144A-204ENST00000360524 OTUD7BQ6GQQ9 843 aa13.65□□□□□ -0.22
CCDC144A-204ENST00000360524 GADD45BO75293 160 aaPredicted RBP13.65□□□□□ -0.22
CCDC144A-204ENST00000360524 OAS2P29728 719 aaKnown RBP13.65□□□□□ -0.22
CCDC144A-204ENST00000360524 ATP10AO60312 1499 aa13.65□□□□□ -0.22
CCDC144A-204ENST00000360524 BACH1O14867 736 aa13.65□□□□□ -0.22
CCDC144A-204ENST00000360524 CHMP2AO43633 222 aa13.65□□□□□ -0.22
CCDC144A-204ENST00000360524 PIK3AP1Q6ZUJ8 805 aa13.65□□□□□ -0.22
CCDC144A-204ENST00000360524 FMNL3Q8IVF7 1028 aa13.65□□□□□ -0.22
CCDC144A-204ENST00000360524 GPCPD1Q9NPB8 672 aa13.65□□□□□ -0.22
CCDC144A-204ENST00000360524 TNNC1P63316 161 aa13.65□□□□□ -0.22
CCDC144A-204ENST00000360524 UTP14CQ5TAP6 766 aaKnown RBP13.65□□□□□ -0.22
CCDC144A-204ENST00000360524 CNGA4Q8IV77 575 aa13.65□□□□□ -0.22
CCDC144A-204ENST00000360524 KLHDC4Q8TBB5 520 aa13.65□□□□□ -0.22
CCDC144A-204ENST00000360524 MAST3O60307 1309 aa13.65□□□□□ -0.22
CCDC144A-204ENST00000360524 NDC80O14777 642 aa13.65□□□□□ -0.23
CCDC144A-204ENST00000360524 SF3A3Q12874 501 aaKnown RBP eCLIP13.65□□□□□ -0.23
CCDC144A-204ENST00000360524 ZSCAN26Q16670 478 aa13.65□□□□□ -0.23
CCDC144A-204ENST00000360524 SV2BQ7L1I2 683 aa13.65□□□□□ -0.23
CCDC144A-204ENST00000360524 DNMT1P26358 1616 aaKnown RBP13.64□□□□□ -0.23
CCDC144A-204ENST00000360524 HGSO14964 777 aaPredicted RBP13.64□□□□□ -0.23
CCDC144A-204ENST00000360524 DEXIO95424 95 aa13.64□□□□□ -0.23
CCDC144A-204ENST00000360524 VIMP08670 466 aaKnown RBP13.64□□□□□ -0.23
CCDC144A-204ENST00000360524 MAP3K9P80192 1104 aa13.64□□□□□ -0.23
CCDC144A-204ENST00000360524 BCL2L12Q9HB09 334 aa13.64□□□□□ -0.23
CCDC144A-204ENST00000360524 AOX1Q06278 1338 aa13.64□□□□□ -0.23
CCDC144A-204ENST00000360524 CCNT1O60563 726 aaKnown RBP13.64□□□□□ -0.23
CCDC144A-204ENST00000360524 KRT9P35527 623 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms