RNA–Protein interactions for RNA: ENST00000359446.9

LDLRAD4-201, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-201ENST00000359446 PLCD1P51178 756 aa14.23□□□□□ -0.13
LDLRAD4-201ENST00000359446 ARFGAP2Q8N6H7 521 aa14.23□□□□□ -0.13
LDLRAD4-201ENST00000359446 HAUS2Q9NVX0 235 aa14.23□□□□□ -0.13
LDLRAD4-201ENST00000359446 TACC3Q9Y6A5 838 aa14.23□□□□□ -0.13
LDLRAD4-201ENST00000359446 MBD4O95243 580 aa14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 LACTBP83111 547 aaPredicted RBP14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 VWA3BQ502W6 1294 aa14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 CCDC125Q86Z20 511 aa14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 TTLL3Q9Y4R7 772 aa14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 PLCH2O75038 1416 aa14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 RNASE9P60153 205 aaKnown RBP14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 ZYXQ15942 572 aaKnown RBP14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 FYB2Q5VWT5 728 aa14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 SYT10Q6XYQ8 523 aa14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 NBPF11Q86T75 865 aa14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 MAP3K5Q99683 1374 aa14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 HMGXB3Q12766 1538 aa14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 FAM160A1Q05DH4 1040 aa14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 CEP85LQ5SZL2 805 aa14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 HDXQ7Z353 690 aa14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 AFAP1L2Q8N4X5 818 aa14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 LINS1Q8NG48 757 aa14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 UFL1O94874 794 aa14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 ATP11AP98196 1134 aa14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 MRPL50Q8N5N7 158 aaKnown RBP14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 DDX39AO00148 427 aaKnown RBP14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 PDE4DQ08499 809 aa14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 SWAP70Q9UH65 585 aa14.22□□□□□ -0.13
LDLRAD4-201ENST00000359446 ACTN4O43707 911 aaKnown RBP14.21□□□□□ -0.13
LDLRAD4-201ENST00000359446 SDCCAG8Q86SQ7 713 aaPredicted RBP14.21□□□□□ -0.13
LDLRAD4-201ENST00000359446 ARHGEF35A5YM69 484 aa14.21□□□□□ -0.13
LDLRAD4-201ENST00000359446 PCDHB15Q9Y5E8 787 aa14.21□□□□□ -0.13
LDLRAD4-201ENST00000359446 CASC4Q6P4E1 433 aa14.21□□□□□ -0.13
LDLRAD4-201ENST00000359446 MAPK8IP1Q9UQF2 711 aa14.21□□□□□ -0.13
LDLRAD4-201ENST00000359446 TBC1D8BQ0IIM8 1120 aa14.21□□□□□ -0.14
LDLRAD4-201ENST00000359446 ASIC2Q16515 512 aa14.21□□□□□ -0.14
LDLRAD4-201ENST00000359446 EXOC7Q9UPT5 735 aa14.21□□□□□ -0.14
LDLRAD4-201ENST00000359446 ARID4AP29374 1257 aaPredicted RBP14.21□□□□□ -0.14
LDLRAD4-201ENST00000359446 UTP14CQ5TAP6 766 aaKnown RBP14.21□□□□□ -0.14
LDLRAD4-201ENST00000359446 NOX5Q96PH1 765 aa14.21□□□□□ -0.14
LDLRAD4-201ENST00000359446 SPOUT1Q5T280 376 aaKnown RBP14.2□□□□□ -0.14
LDLRAD4-201ENST00000359446 VPS16Q9H269 839 aa14.2□□□□□ -0.14
LDLRAD4-201ENST00000359446 PCDH11XQ9BZA7 1347 aa14.2□□□□□ -0.14
LDLRAD4-201ENST00000359446 PCDH11YQ9BZA8 1340 aa14.2□□□□□ -0.14
LDLRAD4-201ENST00000359446 PPP1R2P41236 205 aa14.2□□□□□ -0.14
LDLRAD4-201ENST00000359446 POLR2DO15514 142 aaKnown RBP14.2□□□□□ -0.14
LDLRAD4-201ENST00000359446 EIF4A2Q14240 407 aaKnown RBP14.2□□□□□ -0.14
LDLRAD4-201ENST00000359446 ZRANB1Q9UGI0 708 aa14.2□□□□□ -0.14
LDLRAD4-201ENST00000359446 AFG3L2Q9Y4W6 797 aa14.2□□□□□ -0.14
LDLRAD4-201ENST00000359446 NSMCE1Q8WV22 266 aa14.2□□□□□ -0.14
LDLRAD4-201ENST00000359446 RAPGEF6Q8TEU7 1601 aa14.2□□□□□ -0.14
LDLRAD4-201ENST00000359446 RPRD2Q5VT52 1461 aaKnown RBP14.2□□□□□ -0.14
LDLRAD4-201ENST00000359446 B4E1Z4 1266 aa14.2□□□□□ -0.14
LDLRAD4-201ENST00000359446 NAA25Q14CX7 972 aa14.2□□□□□ -0.14
LDLRAD4-201ENST00000359446 USH1GQ495M9 461 aa14.2□□□□□ -0.14
LDLRAD4-201ENST00000359446 GKAP1Q5VSY0 366 aaPredicted RBP14.2□□□□□ -0.14
LDLRAD4-201ENST00000359446 ZNF365Q70YC5 407 aa14.2□□□□□ -0.14
LDLRAD4-201ENST00000359446 CLSTN2Q9H4D0 955 aa14.2□□□□□ -0.14
LDLRAD4-201ENST00000359446 TTC31Q49AM3 519 aaPredicted RBP14.2□□□□□ -0.14
LDLRAD4-201ENST00000359446 MYL5Q02045 173 aa14.19□□□□□ -0.14
LDLRAD4-201ENST00000359446 PSMD6Q15008 389 aa14.19□□□□□ -0.14
LDLRAD4-201ENST00000359446 PIK3AP1Q6ZUJ8 805 aa14.19□□□□□ -0.14
LDLRAD4-201ENST00000359446 SOS1Q07889 1333 aaPredicted RBP14.19□□□□□ -0.14
LDLRAD4-201ENST00000359446 SYNRGQ9UMZ2 1314 aa14.19□□□□□ -0.14
LDLRAD4-201ENST00000359446 SARNPP82979 210 aaKnown RBP14.19□□□□□ -0.14
LDLRAD4-201ENST00000359446 IGSF22Q8N9C0 903 aa14.19□□□□□ -0.14
LDLRAD4-201ENST00000359446 PUM3Q15397 648 aaKnown RBP14.19□□□□□ -0.14
LDLRAD4-201ENST00000359446 DCUN1D2Q6PH85 259 aa14.19□□□□□ -0.14
LDLRAD4-201ENST00000359446 BEGAINQ9BUH8 593 aa14.19□□□□□ -0.14
LDLRAD4-201ENST00000359446 CACYBPQ9HB71 228 aaKnown RBP14.19□□□□□ -0.14
LDLRAD4-201ENST00000359446 THOC2Q8NI27 1593 aaKnown RBP14.19□□□□□ -0.14
LDLRAD4-201ENST00000359446 PPP2R3AQ06190 1150 aa14.19□□□□□ -0.14
LDLRAD4-201ENST00000359446 M0QZ92 97 aa14.19□□□□□ -0.14
LDLRAD4-201ENST00000359446 GCNT3O95395 438 aa14.19□□□□□ -0.14
LDLRAD4-201ENST00000359446 HELLSQ9NRZ9 838 aa14.19□□□□□ -0.14
LDLRAD4-201ENST00000359446 UHRF1BP1LA0JNW5 1464 aa14.19□□□□□ -0.14
LDLRAD4-201ENST00000359446 NEDD9Q14511 834 aa14.18□□□□□ -0.14
LDLRAD4-201ENST00000359446 NUF2Q9BZD4 464 aa14.18□□□□□ -0.14
LDLRAD4-201ENST00000359446 DKC1O60832 514 aaKnown RBP eCLIP14.18□□□□□ -0.142e-7■■■■■ 72.5
LDLRAD4-201ENST00000359446 DEXIO95424 95 aa14.18□□□□□ -0.14
LDLRAD4-201ENST00000359446 TUBBP07437 444 aa14.18□□□□□ -0.14
LDLRAD4-201ENST00000359446 ATL3Q6DD88 541 aa14.18□□□□□ -0.14
LDLRAD4-201ENST00000359446 NCAPH2Q6IBW4 605 aa14.18□□□□□ -0.14
LDLRAD4-201ENST00000359446 SRGAP1Q7Z6B7 1085 aa14.18□□□□□ -0.14
LDLRAD4-201ENST00000359446 PPFIBP2Q8ND30 876 aa14.18□□□□□ -0.14
LDLRAD4-201ENST00000359446 AATFQ9NY61 560 aaKnown RBP eCLIP14.18□□□□□ -0.14
LDLRAD4-201ENST00000359446 AK9Q5TCS8 1911 aa14.18□□□□□ -0.14
LDLRAD4-201ENST00000359446 C8orf74Q6P047 294 aa14.18□□□□□ -0.14
LDLRAD4-201ENST00000359446 CYP26C1Q6V0L0 522 aa14.18□□□□□ -0.14
LDLRAD4-201ENST00000359446 KRT19P08727 400 aa14.18□□□□□ -0.14
LDLRAD4-201ENST00000359446 CEP85Q6P2H3 762 aa14.18□□□□□ -0.14
LDLRAD4-201ENST00000359446 MRPL44Q9H9J2 332 aaKnown RBP14.18□□□□□ -0.14
LDLRAD4-201ENST00000359446 FLT4P35916 1363 aa14.18□□□□□ -0.14
LDLRAD4-201ENST00000359446 ZNF710Q8N1W2 664 aa14.18□□□□□ -0.14
LDLRAD4-201ENST00000359446 AZI2Q9H6S1 392 aa14.18□□□□□ -0.14
LDLRAD4-201ENST00000359446 USTQ9Y2C2 406 aa14.18□□□□□ -0.14
LDLRAD4-201ENST00000359446 TXKP42681 527 aa14.18□□□□□ -0.14
LDLRAD4-201ENST00000359446 DCAF5Q96JK2 942 aa14.18□□□□□ -0.14
LDLRAD4-201ENST00000359446 CARD10Q9BWT7 1032 aa14.18□□□□□ -0.14
LDLRAD4-201ENST00000359446 TRIM14Q14142 442 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms