RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 PLCD1P51178 756 aa20.55■□□□□ 0.88
SHANK1-202ENST00000359082 PPP2R5DQ14738 602 aa20.55■□□□□ 0.88
SHANK1-202ENST00000359082 KRBA2Q6ZNG9 492 aa20.55■□□□□ 0.88
SHANK1-202ENST00000359082 NCAPH2Q6IBW4 605 aa20.55■□□□□ 0.88
SHANK1-202ENST00000359082 NAPGQ99747 312 aaPredicted RBP20.55■□□□□ 0.88
SHANK1-202ENST00000359082 ATP11AP98196 1134 aa20.54■□□□□ 0.88
SHANK1-202ENST00000359082 STRN3Q13033 797 aa20.54■□□□□ 0.88
SHANK1-202ENST00000359082 TRPC3Q13507 836 aa20.54■□□□□ 0.88
SHANK1-202ENST00000359082 LONRF3Q496Y0 759 aa20.54■□□□□ 0.88
SHANK1-202ENST00000359082 CNNM4Q6P4Q7 775 aa20.54■□□□□ 0.88
SHANK1-202ENST00000359082 AFAP1L1Q8TED9 768 aa20.54■□□□□ 0.88
SHANK1-202ENST00000359082 SMTNP53814 917 aa20.54■□□□□ 0.88
SHANK1-202ENST00000359082 CYP26C1Q6V0L0 522 aa20.54■□□□□ 0.88
SHANK1-202ENST00000359082 SEPT14Q6ZU15 432 aa20.54■□□□□ 0.88
SHANK1-202ENST00000359082 CSRNP2Q9H175 543 aa20.54■□□□□ 0.88
SHANK1-202ENST00000359082 DENND2AQ9ULE3 1009 aa20.54■□□□□ 0.88
SHANK1-202ENST00000359082 RPS6KB1P23443 525 aa20.54■□□□□ 0.88
SHANK1-202ENST00000359082 ITIH3Q06033 890 aa20.54■□□□□ 0.88
SHANK1-202ENST00000359082 TBC1D8BQ0IIM8 1120 aa20.54■□□□□ 0.88
SHANK1-202ENST00000359082 LINS1Q8NG48 757 aa20.54■□□□□ 0.88
SHANK1-202ENST00000359082 EPSTI1Q96J88 318 aa20.54■□□□□ 0.88
SHANK1-202ENST00000359082 GABPAQ06546 454 aa20.54■□□□□ 0.88
SHANK1-202ENST00000359082 PPFIBP2Q8ND30 876 aa20.54■□□□□ 0.88
SHANK1-202ENST00000359082 ZYXQ15942 572 aaKnown RBP20.54■□□□□ 0.88
SHANK1-202ENST00000359082 LIN9Q5TKA1 542 aa20.54■□□□□ 0.88
SHANK1-202ENST00000359082 CCDC110Q8TBZ0 833 aa20.54■□□□□ 0.88
SHANK1-202ENST00000359082 RPRD2Q5VT52 1461 aaKnown RBP20.53■□□□□ 0.88
SHANK1-202ENST00000359082 POLD1P28340 1107 aa20.53■□□□□ 0.88
SHANK1-202ENST00000359082 GKAP1Q5VSY0 366 aaPredicted RBP20.53■□□□□ 0.88
SHANK1-202ENST00000359082 PLEKHM2Q8IWE5 1019 aa20.53■□□□□ 0.88
SHANK1-202ENST00000359082 RSRC1Q96IZ7 334 aaKnown RBP20.53■□□□□ 0.88
SHANK1-202ENST00000359082 SYNRGQ9UMZ2 1314 aa20.53■□□□□ 0.88
SHANK1-202ENST00000359082 MYCLP12524 364 aaPredicted RBP20.53■□□□□ 0.88
SHANK1-202ENST00000359082 C8orf74Q6P047 294 aa20.53■□□□□ 0.88
SHANK1-202ENST00000359082 TRIM31Q9BZY9 425 aa20.53■□□□□ 0.88
SHANK1-202ENST00000359082 TXKP42681 527 aa20.53■□□□□ 0.88
SHANK1-202ENST00000359082 UHRF1BP1LA0JNW5 1464 aa20.53■□□□□ 0.88
SHANK1-202ENST00000359082 SLC8A3P57103 927 aa20.53■□□□□ 0.88
SHANK1-202ENST00000359082 SEPT6Q14141 434 aa20.53■□□□□ 0.88
SHANK1-202ENST00000359082 HGSO14964 777 aaPredicted RBP20.53■□□□□ 0.88
SHANK1-202ENST00000359082 U2AF2P26368 475 aaKnown RBP eCLIP20.53■□□□□ 0.88
SHANK1-202ENST00000359082 PPP2R5CQ13362 524 aa20.53■□□□□ 0.88
SHANK1-202ENST00000359082 USTQ9Y2C2 406 aa20.53■□□□□ 0.88
SHANK1-202ENST00000359082 PLCH2O75038 1416 aa20.53■□□□□ 0.88
SHANK1-202ENST00000359082 FAM170AA1A519 330 aa20.52■□□□□ 0.88
SHANK1-202ENST00000359082 TBC1D7Q9P0N9 293 aa20.52■□□□□ 0.88
SHANK1-202ENST00000359082 VWA3BQ502W6 1294 aa20.52■□□□□ 0.88
SHANK1-202ENST00000359082 FMNL3Q8IVF7 1028 aa20.52■□□□□ 0.88
SHANK1-202ENST00000359082 TTC6Q86TZ1 520 aa20.52■□□□□ 0.88
SHANK1-202ENST00000359082 TMOD4Q9NZQ9 345 aa20.52■□□□□ 0.88
SHANK1-202ENST00000359082 UFL1O94874 794 aa20.52■□□□□ 0.87
SHANK1-202ENST00000359082 IFT74Q96LB3 600 aa20.52■□□□□ 0.87
SHANK1-202ENST00000359082 USP26Q9BXU7 913 aa20.52■□□□□ 0.87
SHANK1-202ENST00000359082 UBL4BQ8N7F7 174 aa20.51■□□□□ 0.87
SHANK1-202ENST00000359082 RABEP2Q9H5N1 569 aa20.51■□□□□ 0.87
SHANK1-202ENST00000359082 DCTPP1Q9H773 170 aa20.51■□□□□ 0.87
SHANK1-202ENST00000359082 PICK1Q9NRD5 415 aa20.51■□□□□ 0.87
SHANK1-202ENST00000359082 RAD50Q92878 1312 aa20.51■□□□□ 0.87
SHANK1-202ENST00000359082 TOM1O60784 492 aa20.51■□□□□ 0.87
SHANK1-202ENST00000359082 IRX3P78415 501 aaPredicted RBP20.51■□□□□ 0.87
SHANK1-202ENST00000359082 SH2D4AQ9H788 454 aa20.51■□□□□ 0.87
SHANK1-202ENST00000359082 ASXL2Q76L83 1435 aa20.51■□□□□ 0.87
SHANK1-202ENST00000359082 NPHP3Q7Z494 1330 aa20.51■□□□□ 0.87
SHANK1-202ENST00000359082 DEXIO95424 95 aa20.51■□□□□ 0.87
SHANK1-202ENST00000359082 ERCC3P19447 782 aa20.51■□□□□ 0.87
SHANK1-202ENST00000359082 BEND3Q5T5X7 828 aa20.51■□□□□ 0.87
SHANK1-202ENST00000359082 FAM184BQ9ULE4 1060 aa20.51■□□□□ 0.87
SHANK1-202ENST00000359082 OGFRQ9NZT2 677 aa20.51■□□□□ 0.87
SHANK1-202ENST00000359082 SLC27A2O14975 620 aa20.5■□□□□ 0.87
SHANK1-202ENST00000359082 ZNF131P52739 623 aa20.5■□□□□ 0.87
SHANK1-202ENST00000359082 NEDD9Q14511 834 aa20.5■□□□□ 0.87
SHANK1-202ENST00000359082 SMC5Q8IY18 1101 aa20.5■□□□□ 0.87
SHANK1-202ENST00000359082 TRIM14Q14142 442 aa20.5■□□□□ 0.87
SHANK1-202ENST00000359082 GNPATO15228 680 aa20.5■□□□□ 0.87
SHANK1-202ENST00000359082 ZNF365Q70YC5 407 aa20.5■□□□□ 0.87
SHANK1-202ENST00000359082 GPATCH8Q9UKJ3 1502 aaKnown RBP20.5■□□□□ 0.87
SHANK1-202ENST00000359082 A2MP01023 1474 aa20.5■□□□□ 0.87
SHANK1-202ENST00000359082 POLR2DO15514 142 aaKnown RBP20.5■□□□□ 0.87
SHANK1-202ENST00000359082 CLSTN2Q9H4D0 955 aa20.5■□□□□ 0.87
SHANK1-202ENST00000359082 STK10O94804 968 aaKnown RBP20.49■□□□□ 0.87
SHANK1-202ENST00000359082 ITGA6P23229 1130 aa20.49■□□□□ 0.87
SHANK1-202ENST00000359082 UBAP1LF5GYI3 381 aa20.49■□□□□ 0.87
SHANK1-202ENST00000359082 KCNH3Q9ULD8 1083 aa20.49■□□□□ 0.87
SHANK1-202ENST00000359082 NOD1Q9Y239 953 aa20.49■□□□□ 0.87
SHANK1-202ENST00000359082 ZNF518AQ6AHZ1 1483 aa20.49■□□□□ 0.87
SHANK1-202ENST00000359082 ANO1Q5XXA6 986 aa20.49■□□□□ 0.87
SHANK1-202ENST00000359082 CSGALNACT2Q8N6G5 542 aa20.49■□□□□ 0.87
SHANK1-202ENST00000359082 SWAP70Q9UH65 585 aa20.49■□□□□ 0.87
SHANK1-202ENST00000359082 CTDSPL2Q05D32 466 aa20.49■□□□□ 0.87
SHANK1-202ENST00000359082 NCOA5Q9HCD5 579 aaKnown RBP20.49■□□□□ 0.87
SHANK1-202ENST00000359082 EXOC7Q9UPT5 735 aa20.49■□□□□ 0.87
SHANK1-202ENST00000359082 GINS2Q9Y248 185 aa20.49■□□□□ 0.87
SHANK1-202ENST00000359082 SOS1Q07889 1333 aaPredicted RBP20.49■□□□□ 0.87
SHANK1-202ENST00000359082 ERCC6LQ2NKX8 1250 aa20.49■□□□□ 0.87
SHANK1-202ENST00000359082 GBP6Q6ZN66 633 aa20.49■□□□□ 0.87
SHANK1-202ENST00000359082 ARHGEF10LQ9HCE6 1279 aa20.49■□□□□ 0.87
SHANK1-202ENST00000359082 V9GY48 417 aaPredicted RBP20.49■□□□□ 0.87
SHANK1-202ENST00000359082 RNMTO43148 476 aaKnown RBP20.48■□□□□ 0.87
SHANK1-202ENST00000359082 PAK1Q13153 545 aa20.48■□□□□ 0.87
SHANK1-202ENST00000359082 PSMD6Q15008 389 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms