RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 MAP1SQ66K74 1059 aaPredicted RBP17.81■□□□□ 0.44
CCNE1-202ENST00000357943 DLK2Q6UY11 383 aa17.81■□□□□ 0.44
CCNE1-202ENST00000357943 TMEM39BQ9GZU3 492 aa17.81■□□□□ 0.44
CCNE1-202ENST00000357943 DEFB129Q9H1M3 183 aa17.81■□□□□ 0.44
CCNE1-202ENST00000357943 ECM29Q5VYK3 1845 aa17.81■□□□□ 0.44
CCNE1-202ENST00000357943 ADM5C9JUS6 153 aa17.8■□□□□ 0.44
CCNE1-202ENST00000357943 TNFAIP1Q13829 316 aa17.8■□□□□ 0.44
CCNE1-202ENST00000357943 C8orf34Q49A92 452 aa17.8■□□□□ 0.44
CCNE1-202ENST00000357943 FAM83AQ86UY5 434 aa17.8■□□□□ 0.44
CCNE1-202ENST00000357943 CDAN1Q8IWY9 1227 aa17.8■□□□□ 0.44
CCNE1-202ENST00000357943 OSBPL5Q9H0X9 879 aaPredicted RBP17.8■□□□□ 0.44
CCNE1-202ENST00000357943 ATP8A2Q9NTI2 1148 aa17.8■□□□□ 0.44
CCNE1-202ENST00000357943 ENTPD3O75355 529 aa17.8■□□□□ 0.44
CCNE1-202ENST00000357943 NPM3O75607 178 aaKnown RBP17.8■□□□□ 0.44
CCNE1-202ENST00000357943 PRAMEF18Q5VWM3 479 aa17.8■□□□□ 0.44
CCNE1-202ENST00000357943 KRT26Q7Z3Y9 468 aa17.8■□□□□ 0.44
CCNE1-202ENST00000357943 SULF1Q8IWU6 871 aa17.8■□□□□ 0.44
CCNE1-202ENST00000357943 IFNL3Q8IZI9 196 aa17.8■□□□□ 0.44
CCNE1-202ENST00000357943 FAM151AQ8WW52 585 aa17.8■□□□□ 0.44
CCNE1-202ENST00000357943 SAP30BPQ9UHR5 308 aaKnown RBP17.8■□□□□ 0.44
CCNE1-202ENST00000357943 TNNI2P48788 182 aa17.79■□□□□ 0.44
CCNE1-202ENST00000357943 PTH1RQ03431 593 aa17.79■□□□□ 0.44
CCNE1-202ENST00000357943 SLC4A8Q2Y0W8 1093 aa17.79■□□□□ 0.44
CCNE1-202ENST00000357943 SH3BP5LQ7L8J4 393 aa17.79■□□□□ 0.44
CCNE1-202ENST00000357943 USP48Q86UV5 1035 aa17.79■□□□□ 0.44
CCNE1-202ENST00000357943 GLIS2Q9BZE0 524 aaPredicted RBP17.79■□□□□ 0.44
CCNE1-202ENST00000357943 MCM9Q9NXL9 1143 aa17.79■□□□□ 0.44
CCNE1-202ENST00000357943 PALD1Q9ULE6 856 aa17.79■□□□□ 0.44
CCNE1-202ENST00000357943 DDTLA6NHG4 134 aaPredicted RBP17.78■□□□□ 0.44
CCNE1-202ENST00000357943 TEPSINQ96N21 525 aa17.78■□□□□ 0.44
CCNE1-202ENST00000357943 LSG1Q9H089 658 aaKnown RBP17.78■□□□□ 0.44
CCNE1-202ENST00000357943 ANO2Q9NQ90 1003 aa17.78■□□□□ 0.44
CCNE1-202ENST00000357943 CDK5RAP2Q96SN8 1893 aa17.78■□□□□ 0.44
CCNE1-202ENST00000357943 RPAP1Q9BWH6 1393 aaPredicted RBP17.77■□□□□ 0.44
CCNE1-202ENST00000357943 FGAP02671 866 aa17.77■□□□□ 0.44
CCNE1-202ENST00000357943 TDO2P48775 406 aa17.77■□□□□ 0.44
CCNE1-202ENST00000357943 EVX2Q03828 476 aa17.77■□□□□ 0.44
CCNE1-202ENST00000357943 GIMAP6Q6P9H5 292 aa17.77■□□□□ 0.44
CCNE1-202ENST00000357943 CDC37L1Q7L3B6 337 aa17.77■□□□□ 0.44
CCNE1-202ENST00000357943 ZSCAN29Q8IWY8 852 aaPredicted RBP17.77■□□□□ 0.44
CCNE1-202ENST00000357943 DSCC1Q9BVC3 393 aa17.77■□□□□ 0.44
CCNE1-202ENST00000357943 NACAP1Q9BZK3 213 aa17.77■□□□□ 0.44
CCNE1-202ENST00000357943 NAPBQ9H115 298 aa17.77■□□□□ 0.44
CCNE1-202ENST00000357943 USP17L12C9JPN9 530 aa17.76■□□□□ 0.43
CCNE1-202ENST00000357943 USP17L21D6R901 530 aa17.76■□□□□ 0.43
CCNE1-202ENST00000357943 SMIM22K7EJ46 135 aa17.76■□□□□ 0.43
CCNE1-202ENST00000357943 CHADLQ6NUI6 762 aa17.76■□□□□ 0.43
CCNE1-202ENST00000357943 CTR9Q6PD62 1173 aa17.76■□□□□ 0.43
CCNE1-202ENST00000357943 KIAA1211Q6ZU35 1233 aa17.76■□□□□ 0.43
CCNE1-202ENST00000357943 DDRGK1Q96HY6 314 aa17.76■□□□□ 0.43
CCNE1-202ENST00000357943 FOCADQ5VW36 1801 aa17.76■□□□□ 0.43
CCNE1-202ENST00000357943 POLR2AP24928 1970 aaKnown RBP17.76■□□□□ 0.43
CCNE1-202ENST00000357943 CYP2D7A0A087X1C5 515 aa17.76■□□□□ 0.43
CCNE1-202ENST00000357943 SEC24BO95487 1268 aa17.76■□□□□ 0.43
CCNE1-202ENST00000357943 CYP2D6P10635 497 aa17.76■□□□□ 0.43
CCNE1-202ENST00000357943 PLCD1P51178 756 aa17.76■□□□□ 0.43
CCNE1-202ENST00000357943 FMR1Q06787 632 aaKnown RBP eCLIP17.76■□□□□ 0.43
CCNE1-202ENST00000357943 NBPF12Q5TAG4 269 aaPredicted RBP17.76■□□□□ 0.43
CCNE1-202ENST00000357943 CSRNP1Q96S65 589 aa17.76■□□□□ 0.43
CCNE1-202ENST00000357943 PPP2R3BQ9Y5P8 575 aa17.76■□□□□ 0.43
CCNE1-202ENST00000357943 ATRNL1Q5VV63 1379 aa17.75■□□□□ 0.43
CCNE1-202ENST00000357943 TRAF5O00463 557 aa17.75■□□□□ 0.43
CCNE1-202ENST00000357943 POLR3DP05423 398 aaPredicted RBP17.75■□□□□ 0.43
CCNE1-202ENST00000357943 SLURP2P0DP57 97 aa17.75■□□□□ 0.43
CCNE1-202ENST00000357943 ALX1Q15699 326 aa17.75■□□□□ 0.43
CCNE1-202ENST00000357943 MAP4K1Q92918 833 aa17.75■□□□□ 0.43
CCNE1-202ENST00000357943 DHX36Q9H2U1 1008 aaKnown RBP17.75■□□□□ 0.43
CCNE1-202ENST00000357943 TOMM70O94826 608 aa17.74■□□□□ 0.43
CCNE1-202ENST00000357943 DDX60LQ5H9U9 1706 aaKnown RBP17.74■□□□□ 0.43
CCNE1-202ENST00000357943 ARPP21Q9UBL0 812 aaPredicted RBP17.74■□□□□ 0.43
CCNE1-202ENST00000357943 COL2A1P02458 1487 aaPredicted RBP17.74■□□□□ 0.43
CCNE1-202ENST00000357943 NAV1Q8NEY1 1877 aa17.73■□□□□ 0.43
CCNE1-202ENST00000357943 MINDY4BA8MYZ0 360 aa17.73■□□□□ 0.43
CCNE1-202ENST00000357943 REC8O95072 547 aa17.73■□□□□ 0.43
CCNE1-202ENST00000357943 ITGBL1O95965 494 aaPredicted RBP17.73■□□□□ 0.43
CCNE1-202ENST00000357943 SBK1Q52WX2 424 aa17.73■□□□□ 0.43
CCNE1-202ENST00000357943 C12orf60Q5U649 245 aa17.73■□□□□ 0.43
CCNE1-202ENST00000357943 CDCA5Q96FF9 252 aa17.73■□□□□ 0.43
CCNE1-202ENST00000357943 BAZ2AQ9UIF9 1905 aaKnown RBP17.73■□□□□ 0.43
CCNE1-202ENST00000357943 ZMYM6O95789 1325 aa17.73■□□□□ 0.43
CCNE1-202ENST00000357943 TTC6Q86TZ1 520 aa17.72■□□□□ 0.43
CCNE1-202ENST00000357943 PI4KBQ9UBF8 816 aa17.72■□□□□ 0.43
CCNE1-202ENST00000357943 RBM8AQ9Y5S9 174 aaKnown RBP17.72■□□□□ 0.43
CCNE1-202ENST00000357943 FAM196BA6NMK8 535 aa17.72■□□□□ 0.43
CCNE1-202ENST00000357943 HLA-DOAP06340 250 aa17.72■□□□□ 0.43
CCNE1-202ENST00000357943 HAND2P61296 217 aa17.72■□□□□ 0.43
CCNE1-202ENST00000357943 MIGA2Q7L4E1 593 aa17.72■□□□□ 0.43
CCNE1-202ENST00000357943 AMOTL1Q8IY63 956 aa17.72■□□□□ 0.43
CCNE1-202ENST00000357943 STK11IPQ8N1F8 1099 aa17.72■□□□□ 0.43
CCNE1-202ENST00000357943 SMC1BQ8NDV3 1235 aa17.72■□□□□ 0.43
CCNE1-202ENST00000357943 RBM46Q8TBY0 533 aaKnown RBP17.72■□□□□ 0.43
CCNE1-202ENST00000357943 FZD1Q9UP38 647 aa17.72■□□□□ 0.43
CCNE1-202ENST00000357943 U3KPZ7 1027 aaPredicted RBP17.72■□□□□ 0.43
CCNE1-202ENST00000357943 SSC5DA1L4H1 1573 aa17.71■□□□□ 0.43
CCNE1-202ENST00000357943 PPARAQ07869 468 aa17.71■□□□□ 0.43
CCNE1-202ENST00000357943 DYNLL2Q96FJ2 89 aa17.71■□□□□ 0.43
CCNE1-202ENST00000357943 DNAJC18Q9H819 358 aa17.71■□□□□ 0.43
CCNE1-202ENST00000357943 MYH1P12882 1939 aa17.71■□□□□ 0.42
CCNE1-202ENST00000357943 CTDSPL2Q05D32 466 aa17.7■□□□□ 0.42
CCNE1-202ENST00000357943 SUPT20HL1Q3ZLR7 823 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 439 ms