RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 VPS54Q9P1Q0 977 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 KIF28PB7ZC32 967 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 DNA2P51530 1060 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 KMT5BQ4FZB7 885 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 RILPL1Q5EBL4 403 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 KRBA2Q6ZNG9 492 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 ATG9AQ7Z3C6 839 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 NOSTRINQ8IVI9 506 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 ALDH8A1Q9H2A2 487 aaPredicted RBP7.79□□□□□ -1.16
RTN4-203ENST00000357376 WWC3Q9ULE0 1092 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 DIP2BQ9P265 1576 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 AGLP35573 1532 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 TSPY2A6NKD2 308 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 NBPF26B4DH59 902 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 AKR1B15C9JRZ8 316 aaPredicted RBP7.78□□□□□ -1.16
RTN4-203ENST00000357376 SEC31AO94979 1220 aaKnown RBP7.78□□□□□ -1.16
RTN4-203ENST00000357376 MCM7P33993 719 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 RFX5P48382 616 aaPredicted RBP7.78□□□□□ -1.16
RTN4-203ENST00000357376 PDE4CQ08493 712 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 NBPF14Q5TI25 921 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 NBPF10Q6P3W6 841 aaKnown RBP7.78□□□□□ -1.16
RTN4-203ENST00000357376 NBPF15Q8N660 670 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 ACSBG1Q96GR2 724 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 TANGO6Q9C0B7 1094 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 VPS16Q9H269 839 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 PPP2R2CQ9Y2T4 447 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 V9GY48 417 aaPredicted RBP7.78□□□□□ -1.16
RTN4-203ENST00000357376 FOXO4P98177 505 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 EXOSC10Q01780 885 aaKnown RBP7.78□□□□□ -1.16
RTN4-203ENST00000357376 SPECC1LQ69YQ0 1117 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 CDK5RAP3Q96JB5 506 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 GPR108Q9NPR9 543 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 ASAP1Q9ULH1 1129 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 NCAPD2Q15021 1401 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 CCDC194A0A1B0GVG4 234 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 TMEM232C9JQI7 657 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 ZSCAN20P17040 1043 aaPredicted RBP7.78□□□□□ -1.16
RTN4-203ENST00000357376 HSPA2P54652 639 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 CCZ1BP86790 482 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 CCZ1P86791 482 aaPredicted RBP7.78□□□□□ -1.16
RTN4-203ENST00000357376 NR5A1Q13285 461 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 PUM3Q15397 648 aaKnown RBP7.78□□□□□ -1.16
RTN4-203ENST00000357376 RABL6Q3YEC7 729 aaPredicted RBP7.78□□□□□ -1.16
RTN4-203ENST00000357376 SPATA5Q8NB90 893 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 CCDC148Q8NFR7 591 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 GUCA1BQ9UMX6 200 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 CTNND2Q9UQB3 1225 aa7.78□□□□□ -1.16
RTN4-203ENST00000357376 DEXIO95424 95 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 TUBB4AP04350 444 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 SSBP05455 408 aaKnown RBP eCLIP7.77□□□□□ -1.17
RTN4-203ENST00000357376 ARMCX5Q6P1M9 558 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 TBC1D10CQ8IV04 446 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 IFNL3Q8IZI9 196 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 TMTC2Q8N394 836 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 SDR42E1Q8WUS8 393 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 PXDNQ92626 1479 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 MAGEB6P1A0A0J9YX57 407 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 PSDA5PKW4 1024 aaPredicted RBP7.77□□□□□ -1.17
RTN4-203ENST00000357376 EXOC5O00471 708 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 FDPSP14324 419 aaKnown RBP7.77□□□□□ -1.17
RTN4-203ENST00000357376 KRT2P35908 639 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 MCAMP43121 646 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 USP5P45974 858 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 AKNAD1Q5T1N1 836 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 UTP14CQ5TAP6 766 aaKnown RBP7.77□□□□□ -1.17
RTN4-203ENST00000357376 SMYD4Q8IYR2 804 aaPredicted RBP7.77□□□□□ -1.17
RTN4-203ENST00000357376 MLKLQ8NB16 471 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 ANKRD7Q92527 254 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 TRIM47Q96LD4 638 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 BLZF1Q9H2G9 400 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 MKNK2Q9HBH9 465 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.77□□□□□ -1.17
RTN4-203ENST00000357376 DDX41Q9UJV9 622 aaKnown RBP7.77□□□□□ -1.17
RTN4-203ENST00000357376 NIP7Q9Y221 180 aaKnown RBP eCLIP7.77□□□□□ -1.17
RTN4-203ENST00000357376 RICTORQ6R327 1708 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 SYNRGQ9UMZ2 1314 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 CTAGE9A4FU28 777 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 PRKAB2O43741 272 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 WDHD1O75717 1129 aaPredicted RBP7.77□□□□□ -1.17
RTN4-203ENST00000357376 UBA7P41226 1012 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 CLCN6P51797 869 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 CTSWP56202 376 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 CCDC152Q4G0S7 254 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 GPIHBP1Q8IV16 184 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 KLHL34Q8N239 644 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 ZBTB38Q8NAP3 1195 aaPredicted RBP7.77□□□□□ -1.17
RTN4-203ENST00000357376 CAPZA3Q96KX2 299 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 EPC1Q9H2F5 836 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 PIH1D3Q9NQM4 214 aaKnown RBP7.77□□□□□ -1.17
RTN4-203ENST00000357376 ST7Q9NRC1 585 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 VPS18Q9P253 973 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 DENND2AQ9ULE3 1009 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 HEG1Q9ULI3 1381 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 UTYO14607 1347 aa7.77□□□□□ -1.17
RTN4-203ENST00000357376 CTAGE15A4D2H0 777 aa7.76□□□□□ -1.17
RTN4-203ENST00000357376 FOXN1O15353 648 aa7.76□□□□□ -1.17
RTN4-203ENST00000357376 CIAO1O76071 339 aa7.76□□□□□ -1.17
RTN4-203ENST00000357376 CTAGE8P0CG41 777 aa7.76□□□□□ -1.17
RTN4-203ENST00000357376 STAT6P42226 847 aa7.76□□□□□ -1.17
RTN4-203ENST00000357376 ATP2B2Q01814 1243 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms