RNA–Protein interactions for RNA: ENST00000355360.8

PGBD2-202, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGBD2, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-202ENST00000355360 ITPK1Q13572 414 aa16.27■□□□□ 0.2
PGBD2-202ENST00000355360 SLC4A8Q2Y0W8 1093 aa16.27■□□□□ 0.2
PGBD2-202ENST00000355360 INTS5Q6P9B9 1019 aaKnown RBP16.27■□□□□ 0.2
PGBD2-202ENST00000355360 NIP7Q9Y221 180 aaKnown RBP eCLIP16.27■□□□□ 0.2
PGBD2-202ENST00000355360 SLC12A7Q9Y666 1083 aa16.27■□□□□ 0.2
PGBD2-202ENST00000355360 SLC5A1P13866 664 aa16.27■□□□□ 0.19
PGBD2-202ENST00000355360 GYG1P46976 350 aa16.27■□□□□ 0.19
PGBD2-202ENST00000355360 NR5A1Q13285 461 aa16.27■□□□□ 0.19
PGBD2-202ENST00000355360 SLC39A14Q15043 492 aa16.27■□□□□ 0.19
PGBD2-202ENST00000355360 PPP4R3BQ5MIZ7 849 aa16.27■□□□□ 0.19
PGBD2-202ENST00000355360 BICDL1Q6ZP65 573 aa16.27■□□□□ 0.19
PGBD2-202ENST00000355360 C3orf67Q6ZVT6 689 aa16.27■□□□□ 0.19
PGBD2-202ENST00000355360 ANKRD36CQ5JPF3 1778 aa16.27■□□□□ 0.19
PGBD2-202ENST00000355360 DPF2Q92785 391 aa16.26■□□□□ 0.19
PGBD2-202ENST00000355360 LRP2BPQ9P2M1 347 aa16.26■□□□□ 0.19
PGBD2-202ENST00000355360 PATL2C9JE40 543 aaKnown RBP16.26■□□□□ 0.19
PGBD2-202ENST00000355360 KCNQ2O43526 872 aa16.26■□□□□ 0.19
PGBD2-202ENST00000355360 PRDM1O75626 825 aa16.26■□□□□ 0.19
PGBD2-202ENST00000355360 IL6STP40189 918 aaPredicted RBP16.26■□□□□ 0.19
PGBD2-202ENST00000355360 MAP3K12Q12852 859 aa16.26■□□□□ 0.19
PGBD2-202ENST00000355360 PTPAQ15257 358 aa16.26■□□□□ 0.19
PGBD2-202ENST00000355360 LONRF3Q496Y0 759 aa16.26■□□□□ 0.19
PGBD2-202ENST00000355360 GRAMD1CQ8IYS0 662 aa16.26■□□□□ 0.19
PGBD2-202ENST00000355360 FAM205CA6NFA0 338 aa16.25■□□□□ 0.19
PGBD2-202ENST00000355360 U2AF2P26368 475 aaKnown RBP eCLIP16.25■□□□□ 0.19
PGBD2-202ENST00000355360 NCAPHQ15003 741 aa16.25■□□□□ 0.19
PGBD2-202ENST00000355360 KLHL34Q8N239 644 aa16.25■□□□□ 0.19
PGBD2-202ENST00000355360 PDILTQ8N807 584 aa16.25■□□□□ 0.19
PGBD2-202ENST00000355360 OXER1Q8TDS5 423 aa16.25■□□□□ 0.19
PGBD2-202ENST00000355360 JAG2Q9Y219 1238 aa16.25■□□□□ 0.19
PGBD2-202ENST00000355360 CHD4Q14839 1912 aa16.25■□□□□ 0.19
PGBD2-202ENST00000355360 MYH14Q7Z406 1995 aaKnown RBP16.25■□□□□ 0.19
PGBD2-202ENST00000355360 NPHP1O15259 732 aa16.25■□□□□ 0.19
PGBD2-202ENST00000355360 UQCRFS1P1P0C7P4 283 aa16.25■□□□□ 0.19
PGBD2-202ENST00000355360 CMA1P23946 247 aa16.25■□□□□ 0.19
PGBD2-202ENST00000355360 CDC25BP30305 580 aa16.25■□□□□ 0.19
PGBD2-202ENST00000355360 EIF5P55010 431 aaKnown RBP16.25■□□□□ 0.19
PGBD2-202ENST00000355360 ZNF827Q17R98 1081 aa16.25■□□□□ 0.19
PGBD2-202ENST00000355360 MFSD6Q6ZSS7 791 aa16.25■□□□□ 0.19
PGBD2-202ENST00000355360 SLC51AQ86UW1 340 aa16.25■□□□□ 0.19
PGBD2-202ENST00000355360 FOXP4Q8IVH2 680 aaPredicted RBP16.25■□□□□ 0.19
PGBD2-202ENST00000355360 MAP3K14Q99558 947 aa16.25■□□□□ 0.19
PGBD2-202ENST00000355360 CHRNDQ07001 517 aa16.24■□□□□ 0.19
PGBD2-202ENST00000355360 AKNAD1Q5T1N1 836 aa16.24■□□□□ 0.19
PGBD2-202ENST00000355360 ARMCX5Q6P1M9 558 aa16.24■□□□□ 0.19
PGBD2-202ENST00000355360 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.24■□□□□ 0.19
PGBD2-202ENST00000355360 NAT10Q9H0A0 1025 aaKnown RBP16.24■□□□□ 0.19
PGBD2-202ENST00000355360 CAVIN2O95810 425 aa16.24■□□□□ 0.19
PGBD2-202ENST00000355360 UTP14AQ9BVJ6 771 aaKnown RBP16.24■□□□□ 0.19
PGBD2-202ENST00000355360 MROH5Q6ZUA9 1318 aa16.24■□□□□ 0.19
PGBD2-202ENST00000355360 ATRNO75882 1429 aa16.24■□□□□ 0.19
PGBD2-202ENST00000355360 NCBP1Q09161 790 aaKnown RBP16.24■□□□□ 0.19
PGBD2-202ENST00000355360 CEP135Q66GS9 1140 aa16.24■□□□□ 0.19
PGBD2-202ENST00000355360 ZNF512BQ96KM6 892 aaPredicted RBP16.24■□□□□ 0.19
PGBD2-202ENST00000355360 HSD3B7Q9H2F3 369 aa16.24■□□□□ 0.19
PGBD2-202ENST00000355360 CCDC87Q9NVE4 849 aa16.24■□□□□ 0.19
PGBD2-202ENST00000355360 ABCC12Q96J65 1359 aa16.24■□□□□ 0.19
PGBD2-202ENST00000355360 TOB1P50616 345 aaPredicted RBP16.23■□□□□ 0.19
PGBD2-202ENST00000355360 NLRP12P59046 1061 aa16.23■□□□□ 0.19
PGBD2-202ENST00000355360 DYNLL1P63167 89 aaKnown RBP16.23■□□□□ 0.19
PGBD2-202ENST00000355360 SSRP1Q08945 709 aaKnown RBP16.23■□□□□ 0.19
PGBD2-202ENST00000355360 TRIM29Q14134 588 aa16.23■□□□□ 0.19
PGBD2-202ENST00000355360 USP49Q70CQ1 688 aa16.23■□□□□ 0.19
PGBD2-202ENST00000355360 METTL16Q86W50 562 aaKnown RBP16.23■□□□□ 0.19
PGBD2-202ENST00000355360 TICAM2Q86XR7 235 aa16.23■□□□□ 0.19
PGBD2-202ENST00000355360 DISP2A7MBM2 1401 aa16.23■□□□□ 0.19
PGBD2-202ENST00000355360 NUTM2BA6NNL0 878 aaPredicted RBP16.23■□□□□ 0.19
PGBD2-202ENST00000355360 NUTM2EB1AL46 878 aaPredicted RBP16.23■□□□□ 0.19
PGBD2-202ENST00000355360 CYP7A1P22680 504 aa16.23■□□□□ 0.19
PGBD2-202ENST00000355360 PDE4BQ07343 736 aa16.23■□□□□ 0.19
PGBD2-202ENST00000355360 NUTM2AQ8IVF1 878 aaPredicted RBP16.23■□□□□ 0.19
PGBD2-202ENST00000355360 DIS3L2Q8IYB7 885 aaKnown RBP16.23■□□□□ 0.19
PGBD2-202ENST00000355360 TMEM87BQ96K49 555 aa16.23■□□□□ 0.19
PGBD2-202ENST00000355360 BAZ2AQ9UIF9 1905 aaKnown RBP16.23■□□□□ 0.19
PGBD2-202ENST00000355360 MYH2Q9UKX2 1941 aa16.23■□□□□ 0.19
PGBD2-202ENST00000355360 DOT1LQ8TEK3 1739 aa16.23■□□□□ 0.19
PGBD2-202ENST00000355360 ERVV-1B6SEH8 477 aa16.22■□□□□ 0.19
PGBD2-202ENST00000355360 TMEM232C9JQI7 657 aa16.22■□□□□ 0.19
PGBD2-202ENST00000355360 CPLX2Q6PUV4 134 aaKnown RBP16.22■□□□□ 0.19
PGBD2-202ENST00000355360 PDCL2Q8N4E4 241 aa16.22■□□□□ 0.19
PGBD2-202ENST00000355360 MAP7D2Q96T17 732 aa16.22■□□□□ 0.19
PGBD2-202ENST00000355360 PCDHB6Q9Y5E3 794 aa16.22■□□□□ 0.19
PGBD2-202ENST00000355360 LOC102724428A0A0B4J2F2 783 aa16.22■□□□□ 0.19
PGBD2-202ENST00000355360 KDM4FA0A1W2PPD8 638 aa16.22■□□□□ 0.19
PGBD2-202ENST00000355360 CAMTA2O94983 1202 aa16.22■□□□□ 0.19
PGBD2-202ENST00000355360 PRR29P0C7W0 189 aa16.22■□□□□ 0.19
PGBD2-202ENST00000355360 SIK1P57059 783 aa16.22■□□□□ 0.19
PGBD2-202ENST00000355360 SHISA4Q96DD7 197 aa16.22■□□□□ 0.19
PGBD2-202ENST00000355360 RAI14Q9P0K7 980 aa16.22■□□□□ 0.19
PGBD2-202ENST00000355360 BMP6P22004 513 aa16.21■□□□□ 0.19
PGBD2-202ENST00000355360 KLRK1P26718 216 aa16.21■□□□□ 0.19
PGBD2-202ENST00000355360 WTAPQ15007 396 aa16.21■□□□□ 0.19
PGBD2-202ENST00000355360 NOM1Q5C9Z4 860 aaKnown RBP16.21■□□□□ 0.19
PGBD2-202ENST00000355360 MARCH10Q8NA82 808 aaPredicted RBP16.21■□□□□ 0.19
PGBD2-202ENST00000355360 PCDHA5Q9Y5H7 936 aa16.21■□□□□ 0.19
PGBD2-202ENST00000355360 CDKL5O76039 1030 aa16.21■□□□□ 0.19
PGBD2-202ENST00000355360 CASP1P29466 404 aa16.21■□□□□ 0.19
PGBD2-202ENST00000355360 IGHMBP2P38935 993 aaKnown RBP16.21■□□□□ 0.19
PGBD2-202ENST00000355360 FANCCQ00597 558 aa16.21■□□□□ 0.19
PGBD2-202ENST00000355360 PTPN14Q15678 1187 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms