RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 HS2ST1Q7LGA3 356 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 C3orf20Q8ND61 904 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 SPTLC2O15270 562 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 PCYT1AP49585 367 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 ALS2CLQ60I27 953 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 CKAP2LQ8IYA6 745 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 COMMD10Q9Y6G5 202 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 EPHB4P54760 987 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 PRPF4BQ13523 1007 aaKnown RBP8.93□□□□□ -0.98
HTT-201ENST00000355072 LIN9Q5TKA1 542 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 BLMP54132 1417 aaPredicted RBP8.93□□□□□ -0.98
HTT-201ENST00000355072 MAGEA9P43362 315 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 NOP2P46087 812 aaKnown RBP8.93□□□□□ -0.98
HTT-201ENST00000355072 MPNDQ8N594 471 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 SYNRGQ9UMZ2 1314 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 ARHGEF10O15013 1369 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 PAWRQ96IZ0 340 aaKnown RBP8.93□□□□□ -0.98
HTT-201ENST00000355072 KIAA0586Q9BVV6 1533 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 FNBP4Q8N3X1 1017 aaPredicted RBP8.93□□□□□ -0.98
HTT-201ENST00000355072 STAG1Q8WVM7 1258 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 TCP11Q8WWU5 503 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 SAR1BQ9Y6B6 198 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 SOS2Q07890 1332 aaPredicted RBP8.93□□□□□ -0.98
HTT-201ENST00000355072 SBNO1A3KN83 1393 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 KRT3P12035 628 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 CCDC92Q53HC0 331 aaPredicted RBP8.93□□□□□ -0.98
HTT-201ENST00000355072 SIL1Q9H173 461 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 ANGPTL3Q9Y5C1 460 aa8.93□□□□□ -0.98
HTT-201ENST00000355072 A0A087WUV0 522 aaPredicted RBP8.93□□□□□ -0.98
HTT-201ENST00000355072 TCP1P17987 556 aaKnown RBP8.93□□□□□ -0.98
HTT-201ENST00000355072 CACYBPQ9HB71 228 aaKnown RBP8.93□□□□□ -0.98
HTT-201ENST00000355072 NOP14P78316 857 aaKnown RBP8.92□□□□□ -0.98
HTT-201ENST00000355072 CCDC122Q5T0U0 273 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 UIMC1Q96RL1 719 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 ASXL2Q76L83 1435 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 USP6NLQ92738 828 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 HAUS3Q68CZ6 603 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 HELBQ8NG08 1087 aaPredicted RBP8.92□□□□□ -0.98
HTT-201ENST00000355072 FAM81BQ96LP2 452 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 LRP2BPQ9P2M1 347 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 FRMD4BQ9Y2L6 1034 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 MICAL1Q8TDZ2 1067 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 ARHGEF2Q92974 986 aaKnown RBP8.92□□□□□ -0.98
HTT-201ENST00000355072 PRDM10Q9NQV6 1147 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 RIPPLY1Q0D2K3 151 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 SPDL1Q96EA4 605 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 GLE1Q53GS7 698 aaKnown RBP8.92□□□□□ -0.98
HTT-201ENST00000355072 ARHGEF18Q6ZSZ5 1173 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 DRC1Q96MC2 740 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 PPCSQ9HAB8 311 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 IGF1RP08069 1367 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 ARHGAP10A1A4S6 786 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 CCDC25Q86WR0 208 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 E9PMD0 336 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 TTI1O43156 1089 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 SUN1O94901 812 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 SLC9C1Q4G0N8 1177 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 ZNF830Q96NB3 372 aaPredicted RBP8.92□□□□□ -0.98
HTT-201ENST00000355072 KIFC3Q9BVG8 833 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 NOC2LQ9Y3T9 749 aaKnown RBP8.92□□□□□ -0.98
HTT-201ENST00000355072 SPDYE4A6NLX3 237 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 HNRNPRO43390 633 aaKnown RBP8.92□□□□□ -0.98
HTT-201ENST00000355072 SERPINB10P48595 397 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 CCDC97Q96F63 343 aaPredicted RBP8.92□□□□□ -0.98
HTT-201ENST00000355072 LZTS2Q9BRK4 669 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 TRIM75PA6NK02 468 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 GOLGA8AA7E2F4 631 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 N4BP1O75113 896 aaKnown RBP8.92□□□□□ -0.98
HTT-201ENST00000355072 NBPF14Q5TI25 921 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 MAD1L1Q9Y6D9 718 aa8.92□□□□□ -0.98
HTT-201ENST00000355072 MATR3P43243 847 aaKnown RBP eCLIP8.91□□□□□ -0.98
HTT-201ENST00000355072 FBXO3Q9UK99 471 aa8.91□□□□□ -0.98
HTT-201ENST00000355072 MYH8P13535 1937 aa8.91□□□□□ -0.98
HTT-201ENST00000355072 KRT5P13647 590 aa8.91□□□□□ -0.98
HTT-201ENST00000355072 RFC1P35251 1148 aaPredicted RBP8.91□□□□□ -0.98
HTT-201ENST00000355072 ASPHQ12797 758 aa8.91□□□□□ -0.98
HTT-201ENST00000355072 EIF4G3O43432 1585 aaKnown RBP8.91□□□□□ -0.98
HTT-201ENST00000355072 IPO5O00410 1097 aaKnown RBP8.91□□□□□ -0.98
HTT-201ENST00000355072 KCNA4P22459 653 aa8.91□□□□□ -0.98
HTT-201ENST00000355072 TRIM15Q9C019 465 aa8.91□□□□□ -0.98
HTT-201ENST00000355072 TMOD2Q9NZR1 351 aa8.91□□□□□ -0.98
HTT-201ENST00000355072 ABCC1P33527 1531 aa8.91□□□□□ -0.98
HTT-201ENST00000355072 ZNF713Q8N859 430 aaPredicted RBP8.91□□□□□ -0.98
HTT-201ENST00000355072 HAUS4Q9H6D7 363 aa8.91□□□□□ -0.98
HTT-201ENST00000355072 TACC3Q9Y6A5 838 aa8.91□□□□□ -0.98
HTT-201ENST00000355072 CREB3O43889 395 aa8.91□□□□□ -0.98
HTT-201ENST00000355072 ERCC5P28715 1186 aaPredicted RBP8.91□□□□□ -0.98
HTT-201ENST00000355072 PSMA4P25789 261 aaKnown RBP8.91□□□□□ -0.98
HTT-201ENST00000355072 MUM1L1Q5H9M0 696 aa8.91□□□□□ -0.98
HTT-201ENST00000355072 SYCP3Q8IZU3 236 aa8.91□□□□□ -0.98
HTT-201ENST00000355072 NBPF3Q9H094 633 aa8.91□□□□□ -0.98
HTT-201ENST00000355072 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.91□□□□□ -0.98
HTT-201ENST00000355072 EVA1CP58658 441 aa8.91□□□□□ -0.98
HTT-201ENST00000355072 MAP3K10Q02779 954 aa8.91□□□□□ -0.98
HTT-201ENST00000355072 EXOSC9Q06265 439 aaKnown RBP8.91□□□□□ -0.98
HTT-201ENST00000355072 TMX3Q96JJ7 454 aa8.91□□□□□ -0.98
HTT-201ENST00000355072 MAPKBP1O60336 1514 aa8.91□□□□□ -0.98
HTT-201ENST00000355072 MRC2Q9UBG0 1479 aa8.91□□□□□ -0.98
HTT-201ENST00000355072 PPP1R12AO14974 1030 aaPredicted RBP8.91□□□□□ -0.98
HTT-201ENST00000355072 SLC5A1P13866 664 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms