RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 SAMM50Q9Y512 469 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 ZNF609O15014 1411 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 GNAT3A8MTJ3 354 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 H0YHG0 523 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 USP14P54578 494 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 EXOSC10Q01780 885 aaKnown RBP8.93□□□□□ -0.98
CD46-203ENST00000354848 NR1I3Q14994 352 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 BRAPQ7Z569 592 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 NAA15Q9BXJ9 866 aaKnown RBP8.93□□□□□ -0.98
CD46-203ENST00000354848 MYO6Q9UM54 1294 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 PCDHA5Q9Y5H7 936 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 NALCNQ8IZF0 1738 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 KIF28PB7ZC32 967 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 AMPD2Q01433 879 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 G3BP1Q13283 466 aaKnown RBP eCLIP8.93□□□□□ -0.98
CD46-203ENST00000354848 SHC4Q6S5L8 630 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 IL17REQ8NFR9 667 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 ZNF274Q96GC6 653 aaPredicted RBP8.93□□□□□ -0.98
CD46-203ENST00000354848 FAXDC2Q96IV6 333 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 C8orf76Q96K31 380 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 CHPF2Q9P2E5 772 aa8.93□□□□□ -0.98
CD46-203ENST00000354848 OVOS2A0A0J9YW53 1432 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 OVOS2Q6IE36 1432 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 CHUKO15111 745 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 FSBPO95073 299 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 GNGT1P63211 74 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 FMR1Q06787 632 aaKnown RBP eCLIP8.92□□□□□ -0.98
CD46-203ENST00000354848 SLC39A14Q15043 492 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 HSP90AB3PQ58FF7 597 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 AMOTL1Q8IY63 956 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 N4BP2L2Q92802 583 aaPredicted RBP8.92□□□□□ -0.98
CD46-203ENST00000354848 CRACR2AQ9BSW2 395 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 GJB4Q9NTQ9 266 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 C9orf78Q9NZ63 289 aaPredicted RBP8.92□□□□□ -0.98
CD46-203ENST00000354848 ATXN2Q99700 1313 aaKnown RBP8.92□□□□□ -0.98
CD46-203ENST00000354848 MCM3P25205 808 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 RDXP35241 583 aaKnown RBP8.92□□□□□ -0.98
CD46-203ENST00000354848 RBL2Q08999 1139 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 TEFQ10587 303 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 ACRBPQ8NEB7 543 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 CPLX3Q8WVH0 158 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 SGSM3Q96HU1 749 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 VEZTQ9HBM0 779 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 TTF2Q9UNY4 1162 aaKnown RBP8.92□□□□□ -0.98
CD46-203ENST00000354848 MLH3Q9UHC1 1453 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 TEX33O43247 280 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 ANXA1P04083 346 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 TRHP20396 242 aaPredicted RBP8.92□□□□□ -0.98
CD46-203ENST00000354848 AMPHP49418 695 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 LONRF3Q496Y0 759 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 PREPLQ4J6C6 727 aaPredicted RBP8.92□□□□□ -0.98
CD46-203ENST00000354848 CHST3Q7LGC8 479 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 TRMT44Q8IYL2 757 aaKnown RBP8.92□□□□□ -0.98
CD46-203ENST00000354848 NDUFB9Q9Y6M9 179 aa8.92□□□□□ -0.98
CD46-203ENST00000354848 A0A1B0GTH6 734 aa8.91□□□□□ -0.98
CD46-203ENST00000354848 MCMDC2Q4G0Z9 681 aa8.91□□□□□ -0.98
CD46-203ENST00000354848 GSPT2Q8IYD1 628 aaKnown RBP8.91□□□□□ -0.98
CD46-203ENST00000354848 ENOX1Q8TC92 643 aaKnown RBP8.91□□□□□ -0.98
CD46-203ENST00000354848 TBC1D22AQ8WUA7 517 aa8.91□□□□□ -0.98
CD46-203ENST00000354848 EYA1Q99502 592 aa8.91□□□□□ -0.98
CD46-203ENST00000354848 SELENOOQ9BVL4 669 aa8.91□□□□□ -0.98
CD46-203ENST00000354848 SAMSN1Q9NSI8 373 aaKnown RBP8.91□□□□□ -0.98
CD46-203ENST00000354848 CEMIPQ8WUJ3 1361 aa8.91□□□□□ -0.98
CD46-203ENST00000354848 FOXN1O15353 648 aa8.91□□□□□ -0.98
CD46-203ENST00000354848 ZMYND10O75800 440 aa8.91□□□□□ -0.98
CD46-203ENST00000354848 MYBL2P10244 700 aa8.91□□□□□ -0.98
CD46-203ENST00000354848 NF2P35240 595 aa8.91□□□□□ -0.98
CD46-203ENST00000354848 TTC19Q6DKK2 380 aaPredicted RBP8.91□□□□□ -0.98
CD46-203ENST00000354848 PPFIBP1Q86W92 1011 aa8.91□□□□□ -0.98
CD46-203ENST00000354848 OTUD6BQ8N6M0 293 aa8.91□□□□□ -0.98
CD46-203ENST00000354848 SH3GL2Q99962 352 aa8.91□□□□□ -0.98
CD46-203ENST00000354848 BABAM1Q9NWV8 329 aa8.91□□□□□ -0.98
CD46-203ENST00000354848 HOOK1Q9UJC3 728 aaKnown RBP8.91□□□□□ -0.98
CD46-203ENST00000354848 MED1Q15648 1581 aaPredicted RBP8.9□□□□□ -0.98
CD46-203ENST00000354848 FAM237AA0A1B0GTK4 181 aa8.9□□□□□ -0.98
CD46-203ENST00000354848 GOLGA6BA6NDN3 693 aa8.9□□□□□ -0.98
CD46-203ENST00000354848 GOLIM4O00461 696 aa8.9□□□□□ -0.98
CD46-203ENST00000354848 MEFVO15553 781 aaPredicted RBP8.9□□□□□ -0.98
CD46-203ENST00000354848 KIAA0754O94854 1291 aa8.9□□□□□ -0.98
CD46-203ENST00000354848 GCFC2P16383 781 aaKnown RBP8.9□□□□□ -0.98
CD46-203ENST00000354848 ARHGAP25P42331 645 aa8.9□□□□□ -0.98
CD46-203ENST00000354848 KIF23Q02241 960 aaPredicted RBP8.9□□□□□ -0.98
CD46-203ENST00000354848 CCDC102BQ68D86 513 aa8.9□□□□□ -0.98
CD46-203ENST00000354848 B4GALNT4Q76KP1 1039 aa8.9□□□□□ -0.98
CD46-203ENST00000354848 NUTM2AQ8IVF1 878 aaPredicted RBP8.9□□□□□ -0.98
CD46-203ENST00000354848 RNF217Q8TC41 542 aa8.9□□□□□ -0.98
CD46-203ENST00000354848 MED15Q96RN5 788 aa8.9□□□□□ -0.98
CD46-203ENST00000354848 MYO1AQ9UBC5 1043 aa8.9□□□□□ -0.98
CD46-203ENST00000354848 ODF2LQ9ULJ1 636 aa8.9□□□□□ -0.98
CD46-203ENST00000354848 A0A0G2JLW4 131 aa8.9□□□□□ -0.98
CD46-203ENST00000354848 MFAP3LO75121 409 aa8.9□□□□□ -0.98
CD46-203ENST00000354848 PAX7P23759 505 aa8.9□□□□□ -0.98
CD46-203ENST00000354848 WLSQ5T9L3 541 aa8.9□□□□□ -0.98
CD46-203ENST00000354848 RESP18Q5W5W9 173 aa8.9□□□□□ -0.98
CD46-203ENST00000354848 NBPF3Q9H094 633 aa8.9□□□□□ -0.98
CD46-203ENST00000354848 MAN1B1Q9UKM7 699 aa8.9□□□□□ -0.98
CD46-203ENST00000354848 TSPOAP1O95153 1857 aa8.9□□□□□ -0.98
CD46-203ENST00000354848 IGSF1Q8N6C5 1336 aa8.9□□□□□ -0.98
CD46-203ENST00000354848 TARSL2A2RTX5 802 aaKnown RBP8.9□□□□□ -0.99
CD46-203ENST00000354848 E7EWF7 191 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 1265.3 ms