RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ANKRD33BA6NCL7 494 aa15.02□□□□□ -0.01
IFT88-202ENST00000351808 HIP1O00291 1037 aa15.02□□□□□ -0.01
IFT88-202ENST00000351808 HSP90AB4PQ58FF6 505 aa15.02□□□□□ -0.01
IFT88-202ENST00000351808 NBPF10Q6P3W6 841 aaKnown RBP15.02□□□□□ -0.01
IFT88-202ENST00000351808 ACRBPQ8NEB7 543 aa15.02□□□□□ -0.01
IFT88-202ENST00000351808 KIF9Q9HAQ2 790 aa15.02□□□□□ -0.01
IFT88-202ENST00000351808 ATXN2Q99700 1313 aaKnown RBP15.01□□□□□ -0.01
IFT88-202ENST00000351808 CHD1O14646 1710 aa15.01□□□□□ -0.01
IFT88-202ENST00000351808 MARCKSP29966 332 aaPredicted RBP15.01□□□□□ -0.01
IFT88-202ENST00000351808 PDE6BP35913 854 aa15.01□□□□□ -0.01
IFT88-202ENST00000351808 CDR1P51861 262 aa15.01□□□□□ -0.01
IFT88-202ENST00000351808 AACSQ86V21 672 aa15.01□□□□□ -0.01
IFT88-202ENST00000351808 CCDC13Q8IYE1 715 aa15.01□□□□□ -0.01
IFT88-202ENST00000351808 BORCS6Q96GS4 357 aa15.01□□□□□ -0.01
IFT88-202ENST00000351808 TEX13AQ9BXU3 409 aaPredicted RBP15.01□□□□□ -0.01
IFT88-202ENST00000351808 VCPKMTQ9H867 229 aa15.01□□□□□ -0.01
IFT88-202ENST00000351808 POLD4Q9HCU8 107 aa15.01□□□□□ -0.01
IFT88-202ENST00000351808 SYKP43405 635 aa15.01□□□□□ -0.01
IFT88-202ENST00000351808 ADCY2Q08462 1091 aa15.01□□□□□ -0.01
IFT88-202ENST00000351808 KRT32Q14532 448 aa15.01□□□□□ -0.01
IFT88-202ENST00000351808 MROH7-TTC4A0A0A0MT08 1334 aa15□□□□□ -0.01
IFT88-202ENST00000351808 ZEB2O60315 1214 aa15□□□□□ -0.01
IFT88-202ENST00000351808 TAF5LO75529 589 aa15□□□□□ -0.01
IFT88-202ENST00000351808 SF3B2Q13435 895 aaKnown RBP15□□□□□ -0.01
IFT88-202ENST00000351808 RASGRP2Q7LDG7 609 aa15□□□□□ -0.01
IFT88-202ENST00000351808 FAM228AQ86W67 206 aa15□□□□□ -0.01
IFT88-202ENST00000351808 SCLT1Q96NL6 688 aa15□□□□□ -0.01
IFT88-202ENST00000351808 NBPF3Q9H094 633 aa15□□□□□ -0.01
IFT88-202ENST00000351808 BOLA2Q9H3K6 86 aa15□□□□□ -0.01
IFT88-202ENST00000351808 ZBTB12Q9Y330 459 aaPredicted RBP15□□□□□ -0.01
IFT88-202ENST00000351808 MROH1Q8NDA8 1641 aa15□□□□□ -0.01
IFT88-202ENST00000351808 PPP1R12BO60237 982 aaPredicted RBP15□□□□□ -0.01
IFT88-202ENST00000351808 EZRP15311 586 aaKnown RBP15□□□□□ -0.01
IFT88-202ENST00000351808 CMA1P23946 247 aa15□□□□□ -0.01
IFT88-202ENST00000351808 PEX19P40855 299 aa15□□□□□ -0.01
IFT88-202ENST00000351808 AMPD2Q01433 879 aa15□□□□□ -0.01
IFT88-202ENST00000351808 SNCBQ16143 134 aa15□□□□□ -0.01
IFT88-202ENST00000351808 PANX2Q96RD6 677 aa15□□□□□ -0.01
IFT88-202ENST00000351808 SNRKQ9NRH2 765 aa15□□□□□ -0.01
IFT88-202ENST00000351808 SPATS2LQ9NUQ6 558 aaKnown RBP15□□□□□ -0.01
IFT88-202ENST00000351808 ETAA1Q9NY74 926 aa15□□□□□ -0.01
IFT88-202ENST00000351808 PA2G4Q9UQ80 394 aaKnown RBP15□□□□□ -0.01
IFT88-202ENST00000351808 NFE2L3Q9Y4A8 694 aa15□□□□□ -0.01
IFT88-202ENST00000351808 MYO1BO43795 1136 aa14.99□□□□□ -0.01
IFT88-202ENST00000351808 ALDH1L1O75891 902 aa14.99□□□□□ -0.01
IFT88-202ENST00000351808 BMP6P22004 513 aa14.99□□□□□ -0.01
IFT88-202ENST00000351808 AMPHP49418 695 aa14.99□□□□□ -0.01
IFT88-202ENST00000351808 RBL2Q08999 1139 aa14.99□□□□□ -0.01
IFT88-202ENST00000351808 EIF4A2Q14240 407 aaKnown RBP14.99□□□□□ -0.01
IFT88-202ENST00000351808 TLDC1Q6P9B6 456 aa14.99□□□□□ -0.01
IFT88-202ENST00000351808 FOXP4Q8IVH2 680 aaPredicted RBP14.99□□□□□ -0.01
IFT88-202ENST00000351808 FRMPD1Q5SYB0 1578 aa14.99□□□□□ -0.01
IFT88-202ENST00000351808 AP1G2O75843 785 aa14.99□□□□□ -0.01
IFT88-202ENST00000351808 YEATS4O95619 227 aa14.99□□□□□ -0.01
IFT88-202ENST00000351808 MCM3P25205 808 aa14.99□□□□□ -0.01
IFT88-202ENST00000351808 ATP1A2P50993 1020 aa14.99□□□□□ -0.01
IFT88-202ENST00000351808 TRMT44Q8IYL2 757 aaKnown RBP14.99□□□□□ -0.01
IFT88-202ENST00000351808 MMS19Q96T76 1030 aa14.99□□□□□ -0.01
IFT88-202ENST00000351808 SH3GL3Q99963 347 aa14.99□□□□□ -0.01
IFT88-202ENST00000351808 PHAXQ9H814 394 aaKnown RBP14.99□□□□□ -0.01
IFT88-202ENST00000351808 TEX33O43247 280 aa14.99□□□□□ -0.01
IFT88-202ENST00000351808 GBP2P32456 591 aaPredicted RBP14.99□□□□□ -0.01
IFT88-202ENST00000351808 CCDC8Q9H0W5 538 aaPredicted RBP14.99□□□□□ -0.01
IFT88-202ENST00000351808 HDAC6Q9UBN7 1215 aa14.99□□□□□ -0.01
IFT88-202ENST00000351808 MED23Q9ULK4 1368 aa14.98□□□□□ -0.01
IFT88-202ENST00000351808 ENC1O14682 589 aa14.98□□□□□ -0.01
IFT88-202ENST00000351808 NAP1L1P55209 391 aaKnown RBP14.98□□□□□ -0.01
IFT88-202ENST00000351808 IFT88Q13099 833 aa14.98□□□□□ -0.01
IFT88-202ENST00000351808 LONRF3Q496Y0 759 aa14.98□□□□□ -0.01
IFT88-202ENST00000351808 CCNI2Q6ZMN8 369 aaPredicted RBP14.98□□□□□ -0.01
IFT88-202ENST00000351808 SPATS2Q86XZ4 545 aaKnown RBP14.98□□□□□ -0.01
IFT88-202ENST00000351808 PARP9Q8IXQ6 854 aa14.98□□□□□ -0.01
IFT88-202ENST00000351808 ARL8AQ96BM9 186 aa14.98□□□□□ -0.01
IFT88-202ENST00000351808 POLR3EQ9NVU0 708 aa14.98□□□□□ -0.01
IFT88-202ENST00000351808 PCDHA5Q9Y5H7 936 aa14.98□□□□□ -0.01
IFT88-202ENST00000351808 FMR1Q06787 632 aaKnown RBP eCLIP14.98□□□□□ -0.01
IFT88-202ENST00000351808 NBPF9Q3BBW0 867 aa14.98□□□□□ -0.01
IFT88-202ENST00000351808 MICALCLQ6ZW33 695 aa14.98□□□□□ -0.01
IFT88-202ENST00000351808 PPFIBP1Q86W92 1011 aa14.98□□□□□ -0.01
IFT88-202ENST00000351808 CCDC26Q8TAB7 109 aa14.98□□□□□ -0.01
IFT88-202ENST00000351808 PARD3BQ8TEW8 1205 aa14.98□□□□□ -0.01
IFT88-202ENST00000351808 ZNF526Q8TF50 670 aaPredicted RBP14.98□□□□□ -0.01
IFT88-202ENST00000351808 HOOK1Q9UJC3 728 aaKnown RBP14.98□□□□□ -0.01
IFT88-202ENST00000351808 XRN1Q8IZH2 1706 aaKnown RBP14.97□□□□□ -0.01
IFT88-202ENST00000351808 AGLP35573 1532 aa14.97□□□□□ -0.01
IFT88-202ENST00000351808 SRGAP2O75044 1071 aa14.97□□□□□ -0.01
IFT88-202ENST00000351808 CYP21A2P08686 494 aa14.97□□□□□ -0.01
IFT88-202ENST00000351808 NR1I3Q14994 352 aa14.97□□□□□ -0.01
IFT88-202ENST00000351808 NAA35Q5VZE5 725 aa14.97□□□□□ -0.01
IFT88-202ENST00000351808 SPDL1Q96EA4 605 aa14.97□□□□□ -0.01
IFT88-202ENST00000351808 EDC3Q96F86 508 aaKnown RBP14.97□□□□□ -0.01
IFT88-202ENST00000351808 CAPZA3Q96KX2 299 aa14.97□□□□□ -0.01
IFT88-202ENST00000351808 SAMSN1Q9NSI8 373 aaKnown RBP14.97□□□□□ -0.01
IFT88-202ENST00000351808 GJB4Q9NTQ9 266 aa14.97□□□□□ -0.01
IFT88-202ENST00000351808 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.97□□□□□ -0.01
IFT88-202ENST00000351808 ZNF18P17022 549 aa14.97□□□□□ -0.01
IFT88-202ENST00000351808 MYSM1Q5VVJ2 828 aa14.97□□□□□ -0.01
IFT88-202ENST00000351808 SYNE3Q6ZMZ3 975 aa14.97□□□□□ -0.01
IFT88-202ENST00000351808 YTHDF3Q7Z739 585 aaKnown RBP14.97□□□□□ -0.01
IFT88-202ENST00000351808 COG3Q96JB2 828 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms