RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 PRDX5P30044 214 aa12□□□□□ -0.49
SMPD4-201ENST00000351288 GOLGA8FQ08AF8 430 aa12□□□□□ -0.49
SMPD4-201ENST00000351288 GOLGA8DPQ0D2H9 430 aa12□□□□□ -0.49
SMPD4-201ENST00000351288 INTS5Q6P9B9 1019 aaKnown RBP12□□□□□ -0.49
SMPD4-201ENST00000351288 MAPKAPK5Q8IW41 473 aa12□□□□□ -0.49
SMPD4-201ENST00000351288 ZNF444Q8N0Y2 327 aaPredicted RBP12□□□□□ -0.49
SMPD4-201ENST00000351288 ALDH8A1Q9H2A2 487 aaPredicted RBP12□□□□□ -0.49
SMPD4-201ENST00000351288 KLRK1P26718 216 aa12□□□□□ -0.49
SMPD4-201ENST00000351288 CATIPQ7Z7H3 387 aa12□□□□□ -0.49
SMPD4-201ENST00000351288 ESR2Q92731 530 aa12□□□□□ -0.49
SMPD4-201ENST00000351288 ARHGEF1Q92888 912 aaKnown RBP12□□□□□ -0.49
SMPD4-201ENST00000351288 PDCL3Q9H2J4 239 aa12□□□□□ -0.49
SMPD4-201ENST00000351288 GPR108Q9NPR9 543 aa12□□□□□ -0.49
SMPD4-201ENST00000351288 NEDD4P46934 1319 aa12□□□□□ -0.49
SMPD4-201ENST00000351288 ADAMTSL3P82987 1691 aa12□□□□□ -0.49
SMPD4-201ENST00000351288 LMOD1P29536 600 aaPredicted RBP12□□□□□ -0.49
SMPD4-201ENST00000351288 TPM4P67936 248 aa12□□□□□ -0.49
SMPD4-201ENST00000351288 RNF41Q9H4P4 317 aaPredicted RBP12□□□□□ -0.49
SMPD4-201ENST00000351288 ZSWIM5Q9P217 1185 aa12□□□□□ -0.49
SMPD4-201ENST00000351288 COL18A1P39060 1754 aa12□□□□□ -0.49
SMPD4-201ENST00000351288 ERVV-1B6SEH8 477 aa11.99□□□□□ -0.49
SMPD4-201ENST00000351288 CBX1P83916 185 aa11.99□□□□□ -0.49
SMPD4-201ENST00000351288 MB21D2Q8IYB1 491 aaPredicted RBP11.99□□□□□ -0.49
SMPD4-201ENST00000351288 ZNF710Q8N1W2 664 aa11.99□□□□□ -0.49
SMPD4-201ENST00000351288 CRNKL1Q9BZJ0 848 aaKnown RBP11.99□□□□□ -0.49
SMPD4-201ENST00000351288 V9GY48 417 aaPredicted RBP11.99□□□□□ -0.49
SMPD4-201ENST00000351288 LAMA4Q16363 1823 aa11.99□□□□□ -0.49
SMPD4-201ENST00000351288 SPTLC2O15270 562 aa11.99□□□□□ -0.49
SMPD4-201ENST00000351288 IGSF3O75054 1194 aa11.99□□□□□ -0.49
SMPD4-201ENST00000351288 CAMTA2O94983 1202 aa11.99□□□□□ -0.49
SMPD4-201ENST00000351288 FAM160A1Q05DH4 1040 aa11.99□□□□□ -0.49
SMPD4-201ENST00000351288 IQCB1Q15051 598 aa11.99□□□□□ -0.49
SMPD4-201ENST00000351288 MYRIPQ8NFW9 859 aa11.99□□□□□ -0.49
SMPD4-201ENST00000351288 MRPS27Q92552 414 aaKnown RBP11.99□□□□□ -0.49
SMPD4-201ENST00000351288 NYXQ9GZU5 481 aa11.99□□□□□ -0.49
SMPD4-201ENST00000351288 ZNF142P52746 1687 aaPredicted RBP11.99□□□□□ -0.49
SMPD4-201ENST00000351288 WDHD1O75717 1129 aaPredicted RBP11.99□□□□□ -0.49
SMPD4-201ENST00000351288 LDHBP07195 334 aaKnown RBP11.99□□□□□ -0.49
SMPD4-201ENST00000351288 AKNAD1Q5T1N1 836 aa11.99□□□□□ -0.49
SMPD4-201ENST00000351288 FAM177A1Q8N128 213 aaPredicted RBP11.99□□□□□ -0.49
SMPD4-201ENST00000351288 FBXO18Q8NFZ0 1043 aa11.99□□□□□ -0.49
SMPD4-201ENST00000351288 ZNF274Q96GC6 653 aaPredicted RBP11.99□□□□□ -0.49
SMPD4-201ENST00000351288 LLPHQ9BRT6 129 aaKnown RBP11.99□□□□□ -0.49
SMPD4-201ENST00000351288 BCL2L12Q9HB09 334 aa11.99□□□□□ -0.49
SMPD4-201ENST00000351288 PATL2C9JE40 543 aaKnown RBP11.98□□□□□ -0.49
SMPD4-201ENST00000351288 TNNT1P13805 278 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 GUCY1A2P33402 732 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 NLRP5P59047 1200 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 TRIM28Q13263 835 aaKnown RBP11.98□□□□□ -0.49
SMPD4-201ENST00000351288 MYSM1Q5VVJ2 828 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 KRT40Q6A162 431 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 LINC00301Q8NCQ3 95 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 TGFBRAP1Q8WUH2 860 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 STAMQ92783 540 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 PLIN2Q99541 437 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 VPS54Q9P1Q0 977 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 CSF1RP07333 972 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 AFMP43652 599 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 STX1AQ16623 288 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 ZBTB9Q96C00 473 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 KRT23Q9C075 422 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 BRMS1Q9HCU9 246 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 CABP5Q9NP86 173 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 TACC3Q9Y6A5 838 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 AFF2P51816 1311 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 MRC1P22897 1456 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 MYO5AQ9Y4I1 1855 aaKnown RBP11.98□□□□□ -0.49
SMPD4-201ENST00000351288 DYNC1I1O14576 645 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 ST5P78524 1137 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 DOK7Q18PE1 504 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 GLIPR1L2Q4G1C9 344 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 ZNF34Q8IZ26 560 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 STRBPQ96SI9 672 aaKnown RBP11.98□□□□□ -0.49
SMPD4-201ENST00000351288 MINPP1Q9UNW1 487 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 SALL1Q9NSC2 1324 aa11.98□□□□□ -0.49
SMPD4-201ENST00000351288 BTBD18B2RXH4 712 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 FOXN1O15353 648 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 APBA3O96018 575 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 SERPINC1P01008 464 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 HSPA1LP34931 641 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 DCCP43146 1447 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 EVX2Q03828 476 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 PLA2G4DQ86XP0 818 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 DHX40Q8IX18 779 aaKnown RBP11.97□□□□□ -0.49
SMPD4-201ENST00000351288 CEP57L1Q8IYX8 460 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 JMYQ8N9B5 988 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 ENGASEQ8NFI3 743 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 TDRD7Q8NHU6 1098 aaKnown RBP11.97□□□□□ -0.49
SMPD4-201ENST00000351288 ZMYND15Q9H091 742 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 TMX1Q9H3N1 280 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 MROH7-TTC4A0A0A0MT08 1334 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 NRDCO43847 1150 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 ZNF202O95125 648 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 CYP2D6P10635 497 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 ATP1A3P13637 1013 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 PPARAQ07869 468 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 SLC51AQ86UW1 340 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 CNNM3Q8NE01 707 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 IFNKQ9P0W0 207 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 NMT2O60551 498 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms