RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 EPHA10Q5JZY3 1008 aa13.89□□□□□ -0.19
SMAD9-201ENST00000350148 STXBP4Q6ZWJ1 553 aa13.89□□□□□ -0.19
SMAD9-201ENST00000350148 FAM200AQ8TCP9 573 aa13.89□□□□□ -0.19
SMAD9-201ENST00000350148 EDC3Q96F86 508 aaKnown RBP13.89□□□□□ -0.19
SMAD9-201ENST00000350148 PPEF1O14829 653 aaPredicted RBP13.89□□□□□ -0.19
SMAD9-201ENST00000350148 CPA1P15085 419 aa13.89□□□□□ -0.19
SMAD9-201ENST00000350148 EIF5P55010 431 aaKnown RBP13.89□□□□□ -0.19
SMAD9-201ENST00000350148 C2CD5Q86YS7 1000 aa13.89□□□□□ -0.19
SMAD9-201ENST00000350148 CNTNAP4Q9C0A0 1308 aa13.88□□□□□ -0.19
SMAD9-201ENST00000350148 TRIM37O94972 964 aa13.88□□□□□ -0.19
SMAD9-201ENST00000350148 GYG1P46976 350 aa13.88□□□□□ -0.19
SMAD9-201ENST00000350148 ZNF165P49910 485 aa13.88□□□□□ -0.19
SMAD9-201ENST00000350148 MCTP2Q6DN12 878 aa13.88□□□□□ -0.19
SMAD9-201ENST00000350148 PLCD3Q8N3E9 789 aa13.88□□□□□ -0.19
SMAD9-201ENST00000350148 GPATCH11Q8N954 259 aa13.88□□□□□ -0.19
SMAD9-201ENST00000350148 TEKT1Q969V4 418 aa13.88□□□□□ -0.19
SMAD9-201ENST00000350148 VAT1LQ9HCJ6 419 aa13.88□□□□□ -0.19
SMAD9-201ENST00000350148 STK24Q9Y6E0 443 aa13.88□□□□□ -0.19
SMAD9-201ENST00000350148 COL5A2P05997 1499 aaPredicted RBP13.88□□□□□ -0.19
SMAD9-201ENST00000350148 FGAP02671 866 aa13.88□□□□□ -0.19
SMAD9-201ENST00000350148 MNS1Q8NEH6 495 aa13.88□□□□□ -0.19
SMAD9-201ENST00000350148 CGNQ9P2M7 1197 aaKnown RBP13.88□□□□□ -0.19
SMAD9-201ENST00000350148 DDAH1O94760 285 aa13.88□□□□□ -0.19
SMAD9-201ENST00000350148 USP8P40818 1118 aa13.88□□□□□ -0.19
SMAD9-201ENST00000350148 CCAR2Q8N163 923 aaKnown RBP13.88□□□□□ -0.19
SMAD9-201ENST00000350148 NPR1P16066 1061 aa13.88□□□□□ -0.19
SMAD9-201ENST00000350148 ZMYM6O95789 1325 aa13.87□□□□□ -0.19
SMAD9-201ENST00000350148 SLIT3O75094 1523 aa13.87□□□□□ -0.19
SMAD9-201ENST00000350148 CFAP100Q494V2 611 aa13.87□□□□□ -0.19
SMAD9-201ENST00000350148 KRI1Q8N9T8 703 aaKnown RBP13.87□□□□□ -0.19
SMAD9-201ENST00000350148 SPC24Q8NBT2 197 aa13.87□□□□□ -0.19
SMAD9-201ENST00000350148 MTA3Q9BTC8 594 aa13.87□□□□□ -0.19
SMAD9-201ENST00000350148 PALD1Q9ULE6 856 aa13.87□□□□□ -0.19
SMAD9-201ENST00000350148 SPAG1Q07617 926 aa13.87□□□□□ -0.19
SMAD9-201ENST00000350148 ZNF34Q8IZ26 560 aa13.87□□□□□ -0.19
SMAD9-201ENST00000350148 ZNF397Q8NF99 534 aaPredicted RBP13.87□□□□□ -0.19
SMAD9-201ENST00000350148 WDR19Q8NEZ3 1342 aa13.87□□□□□ -0.19
SMAD9-201ENST00000350148 PDIA6Q15084 440 aa13.87□□□□□ -0.19
SMAD9-201ENST00000350148 MFSD14BQ5SR56 506 aa13.87□□□□□ -0.19
SMAD9-201ENST00000350148 FKBP15Q5T1M5 1219 aa13.87□□□□□ -0.19
SMAD9-201ENST00000350148 CKAP2LQ8IYA6 745 aa13.87□□□□□ -0.19
SMAD9-201ENST00000350148 ZHX3Q9H4I2 956 aa13.87□□□□□ -0.19
SMAD9-201ENST00000350148 ARHGEF10LQ9HCE6 1279 aa13.87□□□□□ -0.19
SMAD9-201ENST00000350148 PPP1R2P41236 205 aa13.87□□□□□ -0.19
SMAD9-201ENST00000350148 ME3Q16798 604 aa13.87□□□□□ -0.19
SMAD9-201ENST00000350148 WWC2Q6AWC2 1192 aa13.87□□□□□ -0.19
SMAD9-201ENST00000350148 GIMAP6Q6P9H5 292 aa13.87□□□□□ -0.19
SMAD9-201ENST00000350148 USP25Q9UHP3 1055 aa13.87□□□□□ -0.19
SMAD9-201ENST00000350148 NDUFB9Q9Y6M9 179 aa13.87□□□□□ -0.19
SMAD9-201ENST00000350148 ELP1O95163 1332 aa13.87□□□□□ -0.19
SMAD9-201ENST00000350148 ABCC6O95255 1503 aa13.86□□□□□ -0.19
SMAD9-201ENST00000350148 ZNF512BQ96KM6 892 aaPredicted RBP13.86□□□□□ -0.19
SMAD9-201ENST00000350148 DACT1Q9NYF0 836 aa13.86□□□□□ -0.19
SMAD9-201ENST00000350148 SPDYE4A6NLX3 237 aa13.86□□□□□ -0.19
SMAD9-201ENST00000350148 MRPL12P52815 198 aaKnown RBP13.86□□□□□ -0.19
SMAD9-201ENST00000350148 SEC31BQ9NQW1 1179 aa13.86□□□□□ -0.19
SMAD9-201ENST00000350148 YEATS4O95619 227 aa13.86□□□□□ -0.19
SMAD9-201ENST00000350148 CSF1RP07333 972 aa13.86□□□□□ -0.19
SMAD9-201ENST00000350148 FAM160A1Q05DH4 1040 aa13.86□□□□□ -0.19
SMAD9-201ENST00000350148 NECTIN1Q15223 517 aa13.86□□□□□ -0.19
SMAD9-201ENST00000350148 LEKR1Q6ZMV7 388 aa13.86□□□□□ -0.19
SMAD9-201ENST00000350148 NIM1KQ8IY84 436 aa13.86□□□□□ -0.19
SMAD9-201ENST00000350148 LARGE2Q8N3Y3 721 aa13.86□□□□□ -0.19
SMAD9-201ENST00000350148 B4DLN1 442 aa13.85□□□□□ -0.19
SMAD9-201ENST00000350148 CUTAO60888 179 aa13.85□□□□□ -0.19
SMAD9-201ENST00000350148 SFPQP23246 707 aaKnown RBP eCLIP13.85□□□□□ -0.19
SMAD9-201ENST00000350148 CTDSPL2Q05D32 466 aa13.85□□□□□ -0.19
SMAD9-201ENST00000350148 GALNT17Q6IS24 598 aa13.85□□□□□ -0.19
SMAD9-201ENST00000350148 ANO1Q5XXA6 986 aa13.85□□□□□ -0.19
SMAD9-201ENST00000350148 ZSCAN10Q96SZ4 725 aaPredicted RBP13.85□□□□□ -0.19
SMAD9-201ENST00000350148 ADAMTSL3P82987 1691 aa13.85□□□□□ -0.19
SMAD9-201ENST00000350148 NF2P35240 595 aa13.85□□□□□ -0.19
SMAD9-201ENST00000350148 CTAGE1Q96RT6 745 aa13.85□□□□□ -0.19
SMAD9-201ENST00000350148 ALDH8A1Q9H2A2 487 aaPredicted RBP13.85□□□□□ -0.19
SMAD9-201ENST00000350148 EIF6P56537 245 aaKnown RBP13.85□□□□□ -0.19
SMAD9-201ENST00000350148 MARCH10Q8NA82 808 aaPredicted RBP13.85□□□□□ -0.19
SMAD9-201ENST00000350148 KDM6AO15550 1401 aaPredicted RBP13.85□□□□□ -0.19
SMAD9-201ENST00000350148 SEC62Q99442 399 aaKnown RBP13.84□□□□□ -0.19
SMAD9-201ENST00000350148 SWAP70Q9UH65 585 aa13.84□□□□□ -0.19
SMAD9-201ENST00000350148 ZSCAN12O43309 604 aa13.84□□□□□ -0.19
SMAD9-201ENST00000350148 SYCP1Q15431 976 aa13.84□□□□□ -0.19
SMAD9-201ENST00000350148 KRT25Q7Z3Z0 450 aa13.84□□□□□ -0.19
SMAD9-201ENST00000350148 ZNF654Q8IZM8 581 aa13.84□□□□□ -0.19
SMAD9-201ENST00000350148 GIMAP7Q8NHV1 300 aa13.84□□□□□ -0.19
SMAD9-201ENST00000350148 PLCD4Q9BRC7 762 aa13.84□□□□□ -0.19
SMAD9-201ENST00000350148 TANGO6Q9C0B7 1094 aa13.84□□□□□ -0.19
SMAD9-201ENST00000350148 PNMA2Q9UL42 364 aa13.84□□□□□ -0.19
SMAD9-201ENST00000350148 STAT6P42226 847 aa13.84□□□□□ -0.19
SMAD9-201ENST00000350148 SF3B3Q15393 1217 aaKnown RBP13.84□□□□□ -0.19
SMAD9-201ENST00000350148 RBM26Q5T8P6 1007 aaKnown RBP13.84□□□□□ -0.19
SMAD9-201ENST00000350148 GTF2IP78347 998 aa13.84□□□□□ -0.19
SMAD9-201ENST00000350148 SMARCC2Q8TAQ2 1214 aa13.84□□□□□ -0.19
SMAD9-201ENST00000350148 TNS2Q63HR2 1409 aa13.83□□□□□ -0.19
SMAD9-201ENST00000350148 ZNF142P52746 1687 aaPredicted RBP13.83□□□□□ -0.19
SMAD9-201ENST00000350148 USP17L12C9JPN9 530 aa13.83□□□□□ -0.19
SMAD9-201ENST00000350148 USP17L21D6R901 530 aa13.83□□□□□ -0.19
SMAD9-201ENST00000350148 TOP1P11387 765 aaKnown RBP13.83□□□□□ -0.19
SMAD9-201ENST00000350148 HS1BP3Q53T59 392 aa13.83□□□□□ -0.19
SMAD9-201ENST00000350148 COA1Q9GZY4 146 aa13.83□□□□□ -0.19
SMAD9-201ENST00000350148 VEZTQ9HBM0 779 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms