RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 YEATS2Q9ULM3 1422 aa17.37■□□□□ 0.37
PTPRO-202ENST00000348962 NEURL1BA8MQ27 555 aa17.37■□□□□ 0.37
PTPRO-202ENST00000348962 STX10O60499 249 aa17.37■□□□□ 0.37
PTPRO-202ENST00000348962 UBXN1Q04323 297 aa17.37■□□□□ 0.37
PTPRO-202ENST00000348962 PIK3AP1Q6ZUJ8 805 aa17.37■□□□□ 0.37
PTPRO-202ENST00000348962 OTUD6BQ8N6M0 293 aa17.37■□□□□ 0.37
PTPRO-202ENST00000348962 IQCGQ9H095 443 aaKnown RBP17.37■□□□□ 0.37
PTPRO-202ENST00000348962 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.37■□□□□ 0.37
PTPRO-202ENST00000348962 PABPC4Q13310 644 aaKnown RBP eCLIP17.37■□□□□ 0.37
PTPRO-202ENST00000348962 CDAN1Q8IWY9 1227 aa17.37■□□□□ 0.37
PTPRO-202ENST00000348962 LLPHQ9BRT6 129 aaKnown RBP17.37■□□□□ 0.37
PTPRO-202ENST00000348962 M0QZ92 97 aa17.37■□□□□ 0.37
PTPRO-202ENST00000348962 ARPP21Q9UBL0 812 aaPredicted RBP17.37■□□□□ 0.37
PTPRO-202ENST00000348962 DCAF17Q5H9S7 520 aaPredicted RBP17.37■□□□□ 0.37
PTPRO-202ENST00000348962 SULF1Q8IWU6 871 aa17.37■□□□□ 0.37
PTPRO-202ENST00000348962 PLCD3Q8N3E9 789 aa17.37■□□□□ 0.37
PTPRO-202ENST00000348962 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.37■□□□□ 0.37
PTPRO-202ENST00000348962 SLC27A2O14975 620 aa17.36■□□□□ 0.37
PTPRO-202ENST00000348962 CFBP00751 764 aa17.36■□□□□ 0.37
PTPRO-202ENST00000348962 TFAP4Q01664 338 aa17.36■□□□□ 0.37
PTPRO-202ENST00000348962 USP26Q9BXU7 913 aa17.36■□□□□ 0.37
PTPRO-202ENST00000348962 CEP135Q66GS9 1140 aa17.36■□□□□ 0.37
PTPRO-202ENST00000348962 CEP112Q8N8E3 955 aa17.36■□□□□ 0.37
PTPRO-202ENST00000348962 ATP6V0A2Q9Y487 856 aa17.36■□□□□ 0.37
PTPRO-202ENST00000348962 CCNT1O60563 726 aaKnown RBP17.36■□□□□ 0.37
PTPRO-202ENST00000348962 SKILP12757 684 aa17.36■□□□□ 0.37
PTPRO-202ENST00000348962 KIF22Q14807 665 aa17.36■□□□□ 0.37
PTPRO-202ENST00000348962 CARD10Q9BWT7 1032 aa17.36■□□□□ 0.37
PTPRO-202ENST00000348962 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.36■□□□□ 0.37
PTPRO-202ENST00000348962 KCNG1Q9UIX4 513 aa17.36■□□□□ 0.37
PTPRO-202ENST00000348962 TRIM35Q9UPQ4 493 aa17.36■□□□□ 0.37
PTPRO-202ENST00000348962 TXKP42681 527 aa17.36■□□□□ 0.37
PTPRO-202ENST00000348962 GSTA5Q7RTV2 222 aa17.36■□□□□ 0.37
PTPRO-202ENST00000348962 LUC7L2Q9Y383 392 aaKnown RBP17.36■□□□□ 0.37
PTPRO-202ENST00000348962 ELP1O95163 1332 aa17.35■□□□□ 0.37
PTPRO-202ENST00000348962 TRPC3Q13507 836 aa17.35■□□□□ 0.37
PTPRO-202ENST00000348962 DIS3L2Q8IYB7 885 aaKnown RBP17.35■□□□□ 0.37
PTPRO-202ENST00000348962 CEP170Q5SW79 1584 aa17.35■□□□□ 0.37
PTPRO-202ENST00000348962 ZBTB38Q8NAP3 1195 aaPredicted RBP17.35■□□□□ 0.37
PTPRO-202ENST00000348962 KIAA0232Q92628 1395 aa17.35■□□□□ 0.37
PTPRO-202ENST00000348962 ARL1P40616 181 aaPredicted RBP17.35■□□□□ 0.37
PTPRO-202ENST00000348962 CNNM4Q6P4Q7 775 aa17.35■□□□□ 0.37
PTPRO-202ENST00000348962 CTR9Q6PD62 1173 aa17.35■□□□□ 0.37
PTPRO-202ENST00000348962 CCDC50Q8IVM0 306 aa17.35■□□□□ 0.37
PTPRO-202ENST00000348962 DCPSQ96C86 337 aaKnown RBP17.35■□□□□ 0.37
PTPRO-202ENST00000348962 CTAGE15A4D2H0 777 aa17.35■□□□□ 0.37
PTPRO-202ENST00000348962 CTAGE8P0CG41 777 aa17.35■□□□□ 0.37
PTPRO-202ENST00000348962 SYT1P21579 422 aa17.35■□□□□ 0.37
PTPRO-202ENST00000348962 CTAGE6Q86UF2 777 aa17.35■□□□□ 0.37
PTPRO-202ENST00000348962 CTAGE4Q8IX94 777 aa17.35■□□□□ 0.37
PTPRO-202ENST00000348962 KIFAP3Q92845 792 aa17.35■□□□□ 0.37
PTPRO-202ENST00000348962 CGNQ9P2M7 1197 aaKnown RBP17.35■□□□□ 0.37
PTPRO-202ENST00000348962 MAPKBP1O60336 1514 aa17.34■□□□□ 0.37
PTPRO-202ENST00000348962 ZSWIM4Q9H7M6 989 aa17.34■□□□□ 0.37
PTPRO-202ENST00000348962 PCCAP05165 728 aaPredicted RBP17.34■□□□□ 0.37
PTPRO-202ENST00000348962 PNMA2Q9UL42 364 aa17.34■□□□□ 0.37
PTPRO-202ENST00000348962 PDE4DQ08499 809 aa17.34■□□□□ 0.37
PTPRO-202ENST00000348962 RAPGEF1Q13905 1077 aa17.34■□□□□ 0.37
PTPRO-202ENST00000348962 KIAA1524Q8TCG1 905 aa17.34■□□□□ 0.37
PTPRO-202ENST00000348962 LRWD1Q9UFC0 647 aa17.34■□□□□ 0.37
PTPRO-202ENST00000348962 A0A1W2PRG0 241 aa17.34■□□□□ 0.37
PTPRO-202ENST00000348962 TYRO3Q06418 890 aa17.34■□□□□ 0.37
PTPRO-202ENST00000348962 ATP5JP18859 108 aa17.33■□□□□ 0.37
PTPRO-202ENST00000348962 SNX16P57768 344 aa17.33■□□□□ 0.37
PTPRO-202ENST00000348962 USH1GQ495M9 461 aa17.33■□□□□ 0.37
PTPRO-202ENST00000348962 NCAPH2Q6IBW4 605 aa17.33■□□□□ 0.37
PTPRO-202ENST00000348962 PAXBP1Q9Y5B6 917 aa17.33■□□□□ 0.37
PTPRO-202ENST00000348962 INSRP06213 1382 aa17.33■□□□□ 0.37
PTPRO-202ENST00000348962 PZPP20742 1482 aa17.33■□□□□ 0.37
PTPRO-202ENST00000348962 CETN3O15182 167 aa17.33■□□□□ 0.36
PTPRO-202ENST00000348962 SGSM2O43147 1006 aa17.33■□□□□ 0.36
PTPRO-202ENST00000348962 GNPTABQ3T906 1256 aa17.33■□□□□ 0.36
PTPRO-202ENST00000348962 USPL1Q5W0Q7 1092 aa17.33■□□□□ 0.36
PTPRO-202ENST00000348962 SPECC1LQ69YQ0 1117 aa17.33■□□□□ 0.36
PTPRO-202ENST00000348962 MICALCLQ6ZW33 695 aa17.33■□□□□ 0.36
PTPRO-202ENST00000348962 HACE1Q8IYU2 909 aa17.33■□□□□ 0.36
PTPRO-202ENST00000348962 NOX5Q96PH1 765 aa17.33■□□□□ 0.36
PTPRO-202ENST00000348962 FAM227BQ96M60 508 aa17.33■□□□□ 0.36
PTPRO-202ENST00000348962 DNM3Q9UQ16 869 aa17.33■□□□□ 0.36
PTPRO-202ENST00000348962 ADGRL2O95490 1459 aa17.33■□□□□ 0.36
PTPRO-202ENST00000348962 TTC38Q5R3I4 469 aa17.32■□□□□ 0.36
PTPRO-202ENST00000348962 NLRX1Q86UT6 975 aa17.32■□□□□ 0.36
PTPRO-202ENST00000348962 GOLGA1Q92805 767 aa17.32■□□□□ 0.36
PTPRO-202ENST00000348962 TMEM110-MUSTN1A8MSY1 372 aa17.32■□□□□ 0.36
PTPRO-202ENST00000348962 TUBB4AP04350 444 aa17.32■□□□□ 0.36
PTPRO-202ENST00000348962 CCDC186Q7Z3E2 898 aa17.32■□□□□ 0.36
PTPRO-202ENST00000348962 KIAA0825Q8IV33 1275 aa17.32■□□□□ 0.36
PTPRO-202ENST00000348962 PNMA6EA0A0J9YXQ4 647 aa17.32■□□□□ 0.36
PTPRO-202ENST00000348962 ARID4AP29374 1257 aaPredicted RBP17.32■□□□□ 0.36
PTPRO-202ENST00000348962 CTDSPL2Q05D32 466 aa17.32■□□□□ 0.36
PTPRO-202ENST00000348962 NPHP4O75161 1426 aaPredicted RBP17.32■□□□□ 0.36
PTPRO-202ENST00000348962 LPXNO60711 386 aa17.32■□□□□ 0.36
PTPRO-202ENST00000348962 ANO1Q5XXA6 986 aa17.32■□□□□ 0.36
PTPRO-202ENST00000348962 IL17REQ8NFR9 667 aa17.32■□□□□ 0.36
PTPRO-202ENST00000348962 SNX29Q8TEQ0 813 aa17.32■□□□□ 0.36
PTPRO-202ENST00000348962 KIFC2Q96AC6 838 aa17.31■□□□□ 0.36
PTPRO-202ENST00000348962 CPA1P15085 419 aa17.31■□□□□ 0.36
PTPRO-202ENST00000348962 TMC4Q7Z404 712 aa17.31■□□□□ 0.36
PTPRO-202ENST00000348962 UNC13AQ9UPW8 1703 aa17.31■□□□□ 0.36
PTPRO-202ENST00000348962 PTPRTO14522 1441 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms