RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 SAMD7Q7Z3H4 446 aa32.23■■■□□ 2.75
SSBP4-202ENST00000348495 GLTPD2A6NH11 291 aa32.23■■■□□ 2.75
SSBP4-202ENST00000348495 ZKSCAN1P17029 563 aaPredicted RBP32.23■■■□□ 2.75
SSBP4-202ENST00000348495 NFIAQ12857 509 aa32.23■■■□□ 2.75
SSBP4-202ENST00000348495 SPDYE2Q495Y8 402 aa32.23■■■□□ 2.75
SSBP4-202ENST00000348495 DCAF8L1A6NGE4 600 aa32.22■■■□□ 2.75
SSBP4-202ENST00000348495 USP17L12C9JPN9 530 aa32.22■■■□□ 2.75
SSBP4-202ENST00000348495 USP17L21D6R901 530 aa32.22■■■□□ 2.75
SSBP4-202ENST00000348495 EPS15P42566 896 aa32.22■■■□□ 2.75
SSBP4-202ENST00000348495 NBPF9Q3BBW0 867 aa32.22■■■□□ 2.75
SSBP4-202ENST00000348495 NBPF3Q9H094 633 aa32.22■■■□□ 2.75
SSBP4-202ENST00000348495 ZNF70Q9UC06 446 aaPredicted RBP32.22■■■□□ 2.75
SSBP4-202ENST00000348495 ZNF213O14771 459 aa32.21■■■□□ 2.75
SSBP4-202ENST00000348495 HAND2P61296 217 aa32.21■■■□□ 2.75
SSBP4-202ENST00000348495 MCM9Q9NXL9 1143 aa32.21■■■□□ 2.75
SSBP4-202ENST00000348495 ARPP21Q9UBL0 812 aaPredicted RBP32.21■■■□□ 2.75
SSBP4-202ENST00000348495 CACNB3P54284 484 aa32.2■■■□□ 2.75
SSBP4-202ENST00000348495 KIF4BQ2VIQ3 1234 aa32.2■■■□□ 2.75
SSBP4-202ENST00000348495 FAM198AQ9UFP1 575 aa32.2■■■□□ 2.75
SSBP4-202ENST00000348495 ANAPC4Q9UJX5 808 aa32.2■■■□□ 2.75
SSBP4-202ENST00000348495 TBC1D10BQ4KMP7 808 aaPredicted RBP32.2■■■□□ 2.74
SSBP4-202ENST00000348495 RBM26Q5T8P6 1007 aaKnown RBP32.2■■■□□ 2.74
SSBP4-202ENST00000348495 LAMB1P07942 1786 aa32.2■■■□□ 2.74
SSBP4-202ENST00000348495 PPARAQ07869 468 aa32.19■■■□□ 2.74
SSBP4-202ENST00000348495 PICALMQ13492 652 aa32.19■■■□□ 2.74
SSBP4-202ENST00000348495 OSBPL5Q9H0X9 879 aaPredicted RBP32.19■■■□□ 2.74
SSBP4-202ENST00000348495 MYO1BO43795 1136 aa32.18■■■□□ 2.74
SSBP4-202ENST00000348495 FKBP1CQ5VVH2 108 aa32.18■■■□□ 2.74
SSBP4-202ENST00000348495 STOX1Q6ZVD7 989 aa32.18■■■□□ 2.74
SSBP4-202ENST00000348495 MYH1P12882 1939 aa32.18■■■□□ 2.74
SSBP4-202ENST00000348495 CYP2D7A0A087X1C5 515 aa32.17■■■□□ 2.74
SSBP4-202ENST00000348495 CLRN2A0PK11 232 aa32.17■■■□□ 2.74
SSBP4-202ENST00000348495 LMOD1P29536 600 aaPredicted RBP32.17■■■□□ 2.74
SSBP4-202ENST00000348495 ADCK5Q3MIX3 580 aa32.17■■■□□ 2.74
SSBP4-202ENST00000348495 C12orf60Q5U649 245 aa32.17■■■□□ 2.74
SSBP4-202ENST00000348495 CYP2D6P10635 497 aa32.17■■■□□ 2.74
SSBP4-202ENST00000348495 TBC1D10CQ8IV04 446 aa32.17■■■□□ 2.74
SSBP4-202ENST00000348495 TRPM4Q8TD43 1214 aa32.17■■■□□ 2.74
SSBP4-202ENST00000348495 TMOD2Q9NZR1 351 aa32.17■■■□□ 2.74
SSBP4-202ENST00000348495 RBM19Q9Y4C8 960 aaKnown RBP32.17■■■□□ 2.74
SSBP4-202ENST00000348495 MINDY4BA8MYZ0 360 aa32.16■■■□□ 2.74
SSBP4-202ENST00000348495 SMIM22K7EJ46 135 aa32.16■■■□□ 2.74
SSBP4-202ENST00000348495 ENTPD3O75355 529 aa32.16■■■□□ 2.74
SSBP4-202ENST00000348495 KRT32Q14532 448 aa32.16■■■□□ 2.74
SSBP4-202ENST00000348495 ZFPM1Q8IX07 1006 aa32.16■■■□□ 2.74
SSBP4-202ENST00000348495 SAP30BPQ9UHR5 308 aaKnown RBP32.16■■■□□ 2.74
SSBP4-202ENST00000348495 E7EWF7 191 aa32.15■■■□□ 2.74
SSBP4-202ENST00000348495 EVX2Q03828 476 aa32.15■■■□□ 2.74
SSBP4-202ENST00000348495 ADARB2Q9NS39 739 aaKnown RBP32.15■■■□□ 2.74
SSBP4-202ENST00000348495 CTDSPL2Q05D32 466 aa32.14■■■□□ 2.74
SSBP4-202ENST00000348495 TM6SF1Q9BZW5 370 aa32.14■■■□□ 2.74
SSBP4-202ENST00000348495 COL2A1P02458 1487 aaPredicted RBP32.14■■■□□ 2.74
SSBP4-202ENST00000348495 WDR90Q96KV7 1748 aa32.14■■■□□ 2.74
SSBP4-202ENST00000348495 HIRAP54198 1017 aaPredicted RBP32.14■■■□□ 2.74
SSBP4-202ENST00000348495 TACC3Q9Y6A5 838 aa32.14■■■□□ 2.74
SSBP4-202ENST00000348495 ROBO3Q96MS0 1386 aa32.14■■■□□ 2.74
SSBP4-202ENST00000348495 CNTNAP1P78357 1384 aa32.13■■■□□ 2.73
SSBP4-202ENST00000348495 PLCD1P51178 756 aa32.13■■■□□ 2.73
SSBP4-202ENST00000348495 ATRNL1Q5VV63 1379 aa32.12■■■□□ 2.73
SSBP4-202ENST00000348495 POLR3DP05423 398 aaPredicted RBP32.12■■■□□ 2.73
SSBP4-202ENST00000348495 TCP10Q12799 353 aa32.12■■■□□ 2.73
SSBP4-202ENST00000348495 RABEP1Q15276 862 aa32.12■■■□□ 2.73
SSBP4-202ENST00000348495 AMOTL1Q8IY63 956 aa32.12■■■□□ 2.73
SSBP4-202ENST00000348495 STAG1Q8WVM7 1258 aa32.12■■■□□ 2.73
SSBP4-202ENST00000348495 JAKMIP1Q96N16 626 aaKnown RBP32.12■■■□□ 2.73
SSBP4-202ENST00000348495 ASTN2O75129 1339 aaPredicted RBP32.12■■■□□ 2.73
SSBP4-202ENST00000348495 SCN4AP35499 1836 aa32.12■■■□□ 2.73
SSBP4-202ENST00000348495 FGRP09769 529 aa32.12■■■□□ 2.73
SSBP4-202ENST00000348495 AKNAD1Q5T1N1 836 aa32.12■■■□□ 2.73
SSBP4-202ENST00000348495 FAM83AQ86UY5 434 aa32.12■■■□□ 2.73
SSBP4-202ENST00000348495 VEZTQ9HBM0 779 aa32.12■■■□□ 2.73
SSBP4-202ENST00000348495 HACL1Q9UJ83 578 aa32.12■■■□□ 2.73
SSBP4-202ENST00000348495 TCP10L2B9ZVM9 353 aa32.11■■■□□ 2.73
SSBP4-202ENST00000348495 COL9A3Q14050 684 aaPredicted RBP32.11■■■□□ 2.73
SSBP4-202ENST00000348495 SH3BP5LQ7L8J4 393 aa32.11■■■□□ 2.73
SSBP4-202ENST00000348495 ZSWIM6Q9HCJ5 1215 aa32.11■■■□□ 2.73
SSBP4-202ENST00000348495 PSMA5P28066 241 aa32.1■■■□□ 2.73
SSBP4-202ENST00000348495 SLC4A8Q2Y0W8 1093 aa32.1■■■□□ 2.73
SSBP4-202ENST00000348495 FAM151AQ8WW52 585 aa32.1■■■□□ 2.73
SSBP4-202ENST00000348495 NEK1Q96PY6 1258 aa32.1■■■□□ 2.73
SSBP4-202ENST00000348495 DHX36Q9H2U1 1008 aaKnown RBP32.1■■■□□ 2.73
SSBP4-202ENST00000348495 TTC6Q86TZ1 520 aa32.09■■■□□ 2.73
SSBP4-202ENST00000348495 POTECB2RU33 542 aa32.09■■■□□ 2.73
SSBP4-202ENST00000348495 RNF41Q9H4P4 317 aaPredicted RBP32.09■■■□□ 2.73
SSBP4-202ENST00000348495 INCENPQ9NQS7 918 aa32.09■■■□□ 2.73
SSBP4-202ENST00000348495 NEDD4P46934 1319 aa32.08■■■□□ 2.73
SSBP4-202ENST00000348495 DDTLA6NHG4 134 aaPredicted RBP32.08■■■□□ 2.73
SSBP4-202ENST00000348495 PCP11498 1178 aaKnown RBP32.08■■■□□ 2.73
SSBP4-202ENST00000348495 CASTP20810 708 aaKnown RBP32.08■■■□□ 2.73
SSBP4-202ENST00000348495 MFSD6Q6ZSS7 791 aa32.08■■■□□ 2.73
SSBP4-202ENST00000348495 UPF3BQ9BZI7 483 aaKnown RBP32.08■■■□□ 2.73
SSBP4-202ENST00000348495 DDX52Q9Y2R4 599 aaKnown RBP eCLIP32.08■■■□□ 2.731e-6■■■□□ 16.2
SSBP4-202ENST00000348495 SLC3A2P08195 630 aaKnown RBP32.07■■■□□ 2.72
SSBP4-202ENST00000348495 SIPA1L1O43166 1804 aa32.07■■■□□ 2.72
SSBP4-202ENST00000348495 IQCA1LA6NCM1 817 aa32.06■■■□□ 2.72
SSBP4-202ENST00000348495 EPHX2P34913 555 aa32.06■■■□□ 2.72
SSBP4-202ENST00000348495 GABPAQ06546 454 aa32.06■■■□□ 2.72
SSBP4-202ENST00000348495 NCOA7Q8NI08 942 aa32.06■■■□□ 2.72
SSBP4-202ENST00000348495 DYNLL2Q96FJ2 89 aa32.06■■■□□ 2.72
SSBP4-202ENST00000348495 PGAP2Q9UHJ9 254 aa32.06■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms