RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 CTAGE9A4FU28 777 aa17.87■□□□□ 0.45
LRP8-202ENST00000347547 AKR1B15C9JRZ8 316 aaPredicted RBP17.87■□□□□ 0.45
LRP8-202ENST00000347547 BMP6P22004 513 aa17.87■□□□□ 0.45
LRP8-202ENST00000347547 NR1I3Q14994 352 aa17.87■□□□□ 0.45
LRP8-202ENST00000347547 PTPAQ15257 358 aa17.87■□□□□ 0.45
LRP8-202ENST00000347547 CCDC102BQ68D86 513 aa17.87■□□□□ 0.45
LRP8-202ENST00000347547 FOXP4Q8IVH2 680 aaPredicted RBP17.87■□□□□ 0.45
LRP8-202ENST00000347547 PCDHA5Q9Y5H7 936 aa17.87■□□□□ 0.45
LRP8-202ENST00000347547 IGKV5-2P06315 115 aa17.87■□□□□ 0.45
LRP8-202ENST00000347547 RFX5P48382 616 aaPredicted RBP17.87■□□□□ 0.45
LRP8-202ENST00000347547 GSCP56915 257 aaPredicted RBP17.87■□□□□ 0.45
LRP8-202ENST00000347547 RASGRP2Q7LDG7 609 aa17.87■□□□□ 0.45
LRP8-202ENST00000347547 CCDC91Q7Z6B0 441 aa17.87■□□□□ 0.45
LRP8-202ENST00000347547 DACH1Q9UI36 760 aa17.87■□□□□ 0.45
LRP8-202ENST00000347547 CTAGE15A4D2H0 777 aa17.86■□□□□ 0.45
LRP8-202ENST00000347547 CTAGE8P0CG41 777 aa17.86■□□□□ 0.45
LRP8-202ENST00000347547 HSPD1P10809 573 aaKnown RBP17.86■□□□□ 0.45
LRP8-202ENST00000347547 MARCKSP29966 332 aaPredicted RBP17.86■□□□□ 0.45
LRP8-202ENST00000347547 MDM2Q00987 491 aaPredicted RBP17.86■□□□□ 0.45
LRP8-202ENST00000347547 TFCP2Q12800 502 aa17.86■□□□□ 0.45
LRP8-202ENST00000347547 MTF1Q14872 753 aa17.86■□□□□ 0.45
LRP8-202ENST00000347547 CTAGE6Q86UF2 777 aa17.86■□□□□ 0.45
LRP8-202ENST00000347547 NUTM2AQ8IVF1 878 aaPredicted RBP17.86■□□□□ 0.45
LRP8-202ENST00000347547 CTAGE4Q8IX94 777 aa17.86■□□□□ 0.45
LRP8-202ENST00000347547 MLKLQ8NB16 471 aa17.86■□□□□ 0.45
LRP8-202ENST00000347547 AFAP1L1Q8TED9 768 aa17.86■□□□□ 0.45
LRP8-202ENST00000347547 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.86■□□□□ 0.45
LRP8-202ENST00000347547 HPS5Q9UPZ3 1129 aa17.86■□□□□ 0.45
LRP8-202ENST00000347547 PRPF6O94906 941 aaKnown RBP17.86■□□□□ 0.45
LRP8-202ENST00000347547 CDC27P30260 824 aa17.86■□□□□ 0.45
LRP8-202ENST00000347547 AKAP4Q5JQC9 854 aa17.86■□□□□ 0.45
LRP8-202ENST00000347547 NT5DC1Q5TFE4 455 aa17.86■□□□□ 0.45
LRP8-202ENST00000347547 DDX46Q7L014 1031 aaKnown RBP17.86■□□□□ 0.45
LRP8-202ENST00000347547 NFE2L3Q9Y4A8 694 aa17.86■□□□□ 0.45
LRP8-202ENST00000347547 A0A1B0GTH6 734 aa17.85■□□□□ 0.45
LRP8-202ENST00000347547 SOWAHDA6NJG2 315 aa17.85■□□□□ 0.45
LRP8-202ENST00000347547 LRRIQ3A6PVS8 624 aaPredicted RBP17.85■□□□□ 0.45
LRP8-202ENST00000347547 FECHP22830 423 aa17.85■□□□□ 0.45
LRP8-202ENST00000347547 KIF4BQ2VIQ3 1234 aa17.85■□□□□ 0.45
LRP8-202ENST00000347547 RAD9BQ6WBX8 426 aa17.85■□□□□ 0.45
LRP8-202ENST00000347547 DBNDD2Q9BQY9 259 aa17.85■□□□□ 0.45
LRP8-202ENST00000347547 LZTFL1Q9NQ48 299 aa17.85■□□□□ 0.45
LRP8-202ENST00000347547 DDX21Q9NR30 783 aaKnown RBP eCLIP17.85■□□□□ 0.45
LRP8-202ENST00000347547 MYO1AQ9UBC5 1043 aa17.85■□□□□ 0.45
LRP8-202ENST00000347547 HOOK1Q9UJC3 728 aaKnown RBP17.85■□□□□ 0.45
LRP8-202ENST00000347547 NDUFB9Q9Y6M9 179 aa17.85■□□□□ 0.45
LRP8-202ENST00000347547 SHOX2O60902 331 aaPredicted RBP17.84■□□□□ 0.45
LRP8-202ENST00000347547 RNF40O75150 1001 aa17.84■□□□□ 0.45
LRP8-202ENST00000347547 PSEN1P49768 467 aa17.84■□□□□ 0.45
LRP8-202ENST00000347547 PTPN12Q05209 780 aaKnown RBP17.84■□□□□ 0.45
LRP8-202ENST00000347547 WWC2Q6AWC2 1192 aa17.84■□□□□ 0.45
LRP8-202ENST00000347547 TTF2Q9UNY4 1162 aaKnown RBP17.84■□□□□ 0.45
LRP8-202ENST00000347547 LONRF3Q496Y0 759 aa17.84■□□□□ 0.45
LRP8-202ENST00000347547 EPHA10Q5JZY3 1008 aa17.84■□□□□ 0.45
LRP8-202ENST00000347547 ZNF569Q5MCW4 686 aa17.84■□□□□ 0.45
LRP8-202ENST00000347547 MAP3K14Q99558 947 aa17.84■□□□□ 0.45
LRP8-202ENST00000347547 RGPD2P0DJD1 1756 aa17.84■□□□□ 0.45
LRP8-202ENST00000347547 NEURL1BA8MQ27 555 aa17.83■□□□□ 0.45
LRP8-202ENST00000347547 SYF2O95926 243 aaKnown RBP17.83■□□□□ 0.45
LRP8-202ENST00000347547 RHOXF2BP0C7M4 288 aa17.83■□□□□ 0.45
LRP8-202ENST00000347547 CHST3Q7LGC8 479 aa17.83■□□□□ 0.45
LRP8-202ENST00000347547 TRIML1Q8N9V2 468 aa17.83■□□□□ 0.45
LRP8-202ENST00000347547 NAPGQ99747 312 aaPredicted RBP17.83■□□□□ 0.45
LRP8-202ENST00000347547 RHOXF2Q9BQY4 288 aa17.83■□□□□ 0.45
LRP8-202ENST00000347547 TOMM22Q9NS69 142 aa17.83■□□□□ 0.45
LRP8-202ENST00000347547 MAN1B1Q9UKM7 699 aa17.83■□□□□ 0.45
LRP8-202ENST00000347547 KCNH3Q9ULD8 1083 aa17.83■□□□□ 0.45
LRP8-202ENST00000347547 DDX60Q8IY21 1712 aaKnown RBP17.83■□□□□ 0.45
LRP8-202ENST00000347547 A0A0G2JLW4 131 aa17.83■□□□□ 0.44
LRP8-202ENST00000347547 MCM3P25205 808 aa17.83■□□□□ 0.44
LRP8-202ENST00000347547 FMR1Q06787 632 aaKnown RBP eCLIP17.83■□□□□ 0.44
LRP8-202ENST00000347547 GCKRQ14397 625 aa17.83■□□□□ 0.44
LRP8-202ENST00000347547 TEX13AQ9BXU3 409 aaPredicted RBP17.83■□□□□ 0.44
LRP8-202ENST00000347547 GOLGA8BA8MQT2 603 aa17.82■□□□□ 0.44
LRP8-202ENST00000347547 SARSP49591 514 aaKnown RBP17.82■□□□□ 0.44
LRP8-202ENST00000347547 CCDC51Q96ER9 411 aa17.82■□□□□ 0.44
LRP8-202ENST00000347547 WDR19Q8NEZ3 1342 aa17.82■□□□□ 0.44
LRP8-202ENST00000347547 MORC3Q14149 939 aa17.82■□□□□ 0.44
LRP8-202ENST00000347547 RABL6Q3YEC7 729 aaPredicted RBP17.82■□□□□ 0.44
LRP8-202ENST00000347547 CT47A1Q5JQC4 288 aaPredicted RBP17.82■□□□□ 0.44
LRP8-202ENST00000347547 PAG1Q9NWQ8 432 aa17.82■□□□□ 0.44
LRP8-202ENST00000347547 CAMTA1Q9Y6Y1 1673 aa17.81■□□□□ 0.44
LRP8-202ENST00000347547 KLF18A0A0U1RQI7 1052 aa17.81■□□□□ 0.44
LRP8-202ENST00000347547 CPLX1O14810 134 aa17.81■□□□□ 0.44
LRP8-202ENST00000347547 PHACTR2O75167 634 aa17.81■□□□□ 0.44
LRP8-202ENST00000347547 PBX1P40424 430 aa17.81■□□□□ 0.44
LRP8-202ENST00000347547 SLC35F6Q8N357 371 aa17.81■□□□□ 0.44
LRP8-202ENST00000347547 GPHNQ9NQX3 736 aaPredicted RBP17.81■□□□□ 0.44
LRP8-202ENST00000347547 MAST3O60307 1309 aa17.81■□□□□ 0.44
LRP8-202ENST00000347547 KDM6AO15550 1401 aaPredicted RBP17.81■□□□□ 0.44
LRP8-202ENST00000347547 ERCC5P28715 1186 aaPredicted RBP17.81■□□□□ 0.44
LRP8-202ENST00000347547 AMPD2Q01433 879 aa17.81■□□□□ 0.44
LRP8-202ENST00000347547 NEXNQ0ZGT2 675 aa17.81■□□□□ 0.44
LRP8-202ENST00000347547 MAP9Q49MG5 647 aa17.81■□□□□ 0.44
LRP8-202ENST00000347547 APTXQ7Z2E3 356 aaKnown RBP17.81■□□□□ 0.44
LRP8-202ENST00000347547 PPFIBP1Q86W92 1011 aa17.81■□□□□ 0.44
LRP8-202ENST00000347547 VPS37DQ86XT2 251 aa17.81■□□□□ 0.44
LRP8-202ENST00000347547 GJB4Q9NTQ9 266 aa17.81■□□□□ 0.44
LRP8-202ENST00000347547 ZC3H4Q9UPT8 1303 aaKnown RBP17.81■□□□□ 0.44
LRP8-202ENST00000347547 C4AP0C0L4 1744 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms