RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 DCTPP1Q9H773 170 aa19.17■□□□□ 0.66
TSPAN4-201ENST00000346501 PCNTO95613 3336 aa19.17■□□□□ 0.66
TSPAN4-201ENST00000346501 AKAP11Q9UKA4 1901 aa19.17■□□□□ 0.66
TSPAN4-201ENST00000346501 WDHD1O75717 1129 aaPredicted RBP19.16■□□□□ 0.66
TSPAN4-201ENST00000346501 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.16■□□□□ 0.66
TSPAN4-201ENST00000346501 CRBNQ96SW2 442 aa19.16■□□□□ 0.66
TSPAN4-201ENST00000346501 DNAJC2Q99543 621 aaKnown RBP19.16■□□□□ 0.66
TSPAN4-201ENST00000346501 PIH1D3Q9NQM4 214 aaKnown RBP19.16■□□□□ 0.66
TSPAN4-201ENST00000346501 AATFQ9NY61 560 aaKnown RBP eCLIP19.16■□□□□ 0.66
TSPAN4-201ENST00000346501 RHBDL3P58872 404 aa19.15■□□□□ 0.66
TSPAN4-201ENST00000346501 ERO1BQ86YB8 467 aa19.15■□□□□ 0.66
TSPAN4-201ENST00000346501 ZNF384Q8TF68 577 aa19.15■□□□□ 0.66
TSPAN4-201ENST00000346501 ATP5JP18859 108 aa19.14■□□□□ 0.65
TSPAN4-201ENST00000346501 GTF2A2P52657 109 aa19.14■□□□□ 0.65
TSPAN4-201ENST00000346501 PPP4CP60510 307 aa19.14■□□□□ 0.65
TSPAN4-201ENST00000346501 MAGEB6Q8N7X4 407 aa19.14■□□□□ 0.65
TSPAN4-201ENST00000346501 OTUD5Q96G74 571 aa19.14■□□□□ 0.65
TSPAN4-201ENST00000346501 TRIM34Q9BYJ4 488 aa19.14■□□□□ 0.65
TSPAN4-201ENST00000346501 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.14■□□□□ 0.65
TSPAN4-201ENST00000346501 SPDYE5A6NIY4 337 aa19.13■□□□□ 0.65
TSPAN4-201ENST00000346501 GOLIM4O00461 696 aa19.13■□□□□ 0.65
TSPAN4-201ENST00000346501 SH3RF3Q8TEJ3 882 aaPredicted RBP19.13■□□□□ 0.65
TSPAN4-201ENST00000346501 ZKSCAN4Q969J2 545 aaPredicted RBP19.13■□□□□ 0.65
TSPAN4-201ENST00000346501 OSBPL5Q9H0X9 879 aaPredicted RBP19.13■□□□□ 0.65
TSPAN4-201ENST00000346501 DHX36Q9H2U1 1008 aaKnown RBP19.13■□□□□ 0.65
TSPAN4-201ENST00000346501 BOLA2Q9H3K6 86 aa19.13■□□□□ 0.65
TSPAN4-201ENST00000346501 PICK1Q9NRD5 415 aa19.13■□□□□ 0.65
TSPAN4-201ENST00000346501 MAST2Q6P0Q8 1798 aa19.12■□□□□ 0.65
TSPAN4-201ENST00000346501 SMARCA5O60264 1052 aaPredicted RBP19.12■□□□□ 0.65
TSPAN4-201ENST00000346501 SLC9C2Q5TAH2 1124 aa19.12■□□□□ 0.65
TSPAN4-201ENST00000346501 ZFPM1Q8IX07 1006 aa19.12■□□□□ 0.65
TSPAN4-201ENST00000346501 ANTXR1Q9H6X2 564 aa19.12■□□□□ 0.65
TSPAN4-201ENST00000346501 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.12■□□□□ 0.652e-8■■■■■ 42.5
TSPAN4-201ENST00000346501 DDX4Q9NQI0 724 aaKnown RBP19.12■□□□□ 0.65
TSPAN4-201ENST00000346501 ECHDC1Q9NTX5 307 aa19.12■□□□□ 0.65
TSPAN4-201ENST00000346501 PAG1Q9NWQ8 432 aa19.12■□□□□ 0.65
TSPAN4-201ENST00000346501 PCDHB15Q9Y5E8 787 aa19.12■□□□□ 0.65
TSPAN4-201ENST00000346501 NDUFB9Q9Y6M9 179 aa19.12■□□□□ 0.65
TSPAN4-201ENST00000346501 RFX7Q2KHR2 1363 aa19.11■□□□□ 0.65
TSPAN4-201ENST00000346501 CETPP11597 493 aa19.11■□□□□ 0.65
TSPAN4-201ENST00000346501 USP5P45974 858 aa19.11■□□□□ 0.65
TSPAN4-201ENST00000346501 PPATQ06203 517 aa19.11■□□□□ 0.65
TSPAN4-201ENST00000346501 SNAPC2Q13487 334 aa19.11■□□□□ 0.65
TSPAN4-201ENST00000346501 ZSCAN25Q6NSZ9 544 aa19.11■□□□□ 0.65
TSPAN4-201ENST00000346501 IFNL1Q8IU54 200 aa19.11■□□□□ 0.65
TSPAN4-201ENST00000346501 TGFBRAP1Q8WUH2 860 aa19.11■□□□□ 0.65
TSPAN4-201ENST00000346501 ZNF112Q9UJU3 913 aa19.11■□□□□ 0.65
TSPAN4-201ENST00000346501 SNCAIPQ9Y6H5 919 aa19.11■□□□□ 0.65
TSPAN4-201ENST00000346501 ATRNL1Q5VV63 1379 aa19.1■□□□□ 0.65
TSPAN4-201ENST00000346501 DDTLA6NHG4 134 aaPredicted RBP19.1■□□□□ 0.65
TSPAN4-201ENST00000346501 HLA-DOAP06340 250 aa19.1■□□□□ 0.65
TSPAN4-201ENST00000346501 INPP5BP32019 993 aa19.1■□□□□ 0.65
TSPAN4-201ENST00000346501 PPIL2Q13356 520 aa19.1■□□□□ 0.65
TSPAN4-201ENST00000346501 PI4KBQ9UBF8 816 aa19.1■□□□□ 0.65
TSPAN4-201ENST00000346501 COL2A1P02458 1487 aaPredicted RBP19.09■□□□□ 0.65
TSPAN4-201ENST00000346501 CCL15-CCL14A0A0B4J2E2 113 aa19.09■□□□□ 0.65
TSPAN4-201ENST00000346501 ERC2O15083 957 aa19.09■□□□□ 0.65
TSPAN4-201ENST00000346501 TBC1D12O60347 775 aa19.09■□□□□ 0.65
TSPAN4-201ENST00000346501 CTNND1O60716 968 aaKnown RBP19.09■□□□□ 0.65
TSPAN4-201ENST00000346501 TBC1D8O95759 1140 aa19.09■□□□□ 0.65
TSPAN4-201ENST00000346501 CCL15Q16663 113 aa19.09■□□□□ 0.65
TSPAN4-201ENST00000346501 NOL9Q5SY16 702 aaKnown RBP19.09■□□□□ 0.65
TSPAN4-201ENST00000346501 MAPKAPK5Q8IW41 473 aa19.09■□□□□ 0.65
TSPAN4-201ENST00000346501 CRACR2BQ8N4Y2 399 aaPredicted RBP19.09■□□□□ 0.65
TSPAN4-201ENST00000346501 MIGA1Q8NAN2 632 aa19.09■□□□□ 0.65
TSPAN4-201ENST00000346501 GCC1Q96CN9 775 aa19.09■□□□□ 0.65
TSPAN4-201ENST00000346501 HAUS7Q99871 368 aa19.09■□□□□ 0.65
TSPAN4-201ENST00000346501 HERC5Q9UII4 1024 aaKnown RBP19.09■□□□□ 0.65
TSPAN4-201ENST00000346501 MAGEB6P1A0A0J9YX57 407 aa19.08■□□□□ 0.64
TSPAN4-201ENST00000346501 GJA5P36382 358 aa19.08■□□□□ 0.64
TSPAN4-201ENST00000346501 LRRFIP1Q32MZ4 808 aaKnown RBP19.08■□□□□ 0.64
TSPAN4-201ENST00000346501 SH3BP5LQ7L8J4 393 aa19.08■□□□□ 0.64
TSPAN4-201ENST00000346501 ADGRA1Q86SQ6 560 aa19.08■□□□□ 0.64
TSPAN4-201ENST00000346501 SCYL3Q8IZE3 742 aa19.08■□□□□ 0.64
TSPAN4-201ENST00000346501 CRNKL1Q9BZJ0 848 aaKnown RBP19.08■□□□□ 0.64
TSPAN4-201ENST00000346501 RWDD1Q9H446 243 aaPredicted RBP19.08■□□□□ 0.64
TSPAN4-201ENST00000346501 DOCK2Q92608 1830 aa19.07■□□□□ 0.64
TSPAN4-201ENST00000346501 OTOFQ9HC10 1997 aa19.07■□□□□ 0.64
TSPAN4-201ENST00000346501 TESPA1A2RU30 521 aaPredicted RBP19.07■□□□□ 0.64
TSPAN4-201ENST00000346501 PDE6AP16499 860 aa19.07■□□□□ 0.64
TSPAN4-201ENST00000346501 DYNLL1P63167 89 aaKnown RBP19.07■□□□□ 0.64
TSPAN4-201ENST00000346501 MAP3K10Q02779 954 aa19.07■□□□□ 0.64
TSPAN4-201ENST00000346501 NOM1Q5C9Z4 860 aaKnown RBP19.07■□□□□ 0.64
TSPAN4-201ENST00000346501 FOXP4Q8IVH2 680 aaPredicted RBP19.07■□□□□ 0.64
TSPAN4-201ENST00000346501 CNKSR2Q8WXI2 1034 aa19.07■□□□□ 0.64
TSPAN4-201ENST00000346501 CFHR5Q9BXR6 569 aa19.07■□□□□ 0.64
TSPAN4-201ENST00000346501 SUPT16HQ9Y5B9 1047 aaKnown RBP19.07■□□□□ 0.64
TSPAN4-201ENST00000346501 FLT1P17948 1338 aa19.06■□□□□ 0.64
TSPAN4-201ENST00000346501 IRF6O14896 467 aa19.06■□□□□ 0.64
TSPAN4-201ENST00000346501 HDAC1Q13547 482 aaPredicted RBP19.06■□□□□ 0.64
TSPAN4-201ENST00000346501 TTC6Q86TZ1 520 aa19.06■□□□□ 0.64
TSPAN4-201ENST00000346501 DDRGK1Q96HY6 314 aa19.06■□□□□ 0.64
TSPAN4-201ENST00000346501 TTC41PQ6P2S7 1318 aa19.05■□□□□ 0.64
TSPAN4-201ENST00000346501 ZNF532Q9HCE3 1301 aa19.05■□□□□ 0.64
TSPAN4-201ENST00000346501 GPR25O00155 361 aa19.05■□□□□ 0.64
TSPAN4-201ENST00000346501 IGF2BP3O00425 579 aaKnown RBP eCLIP19.05■□□□□ 0.64
TSPAN4-201ENST00000346501 FKTNO75072 461 aa19.05■□□□□ 0.64
TSPAN4-201ENST00000346501 DGKZQ13574 1117 aa19.05■□□□□ 0.64
TSPAN4-201ENST00000346501 TAF1CQ15572 869 aaPredicted RBP19.05■□□□□ 0.64
TSPAN4-201ENST00000346501 ANKRD45Q5TZF3 282 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms