RNA–Protein interactions for RNA: ENST00000345317.6

SKAP2-201, Transcript of src kinase associated phosphoprotein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP2, Length 3,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-201ENST00000345317 DYNLL2Q96FJ2 89 aa10□□□□□ -0.81
SKAP2-201ENST00000345317 TTF2Q9UNY4 1162 aaKnown RBP10□□□□□ -0.81
SKAP2-201ENST00000345317 FAM84BQ96KN1 310 aaPredicted RBP10□□□□□ -0.81
SKAP2-201ENST00000345317 TMOD2Q9NZR1 351 aa10□□□□□ -0.81
SKAP2-201ENST00000345317 TNKSO95271 1327 aa10□□□□□ -0.81
SKAP2-201ENST00000345317 USP42Q9H9J4 1324 aaKnown RBP10□□□□□ -0.81
SKAP2-201ENST00000345317 SSBP05455 408 aaKnown RBP eCLIP9.99□□□□□ -0.81
SKAP2-201ENST00000345317 GOLGA8HP0CJ92 632 aa9.99□□□□□ -0.81
SKAP2-201ENST00000345317 LIG1P18858 919 aa9.99□□□□□ -0.81
SKAP2-201ENST00000345317 OLFM4Q6UX06 510 aa9.99□□□□□ -0.81
SKAP2-201ENST00000345317 C2CD5Q86YS7 1000 aa9.99□□□□□ -0.81
SKAP2-201ENST00000345317 SLF2Q8IX21 1173 aa9.99□□□□□ -0.81
SKAP2-201ENST00000345317 DNAJC25Q9H1X3 360 aa9.99□□□□□ -0.81
SKAP2-201ENST00000345317 ZNF287Q9HBT7 754 aa9.99□□□□□ -0.81
SKAP2-201ENST00000345317 CABP5Q9NP86 173 aa9.99□□□□□ -0.81
SKAP2-201ENST00000345317 VPS54Q9P1Q0 977 aa9.99□□□□□ -0.81
SKAP2-201ENST00000345317 NOL7Q9UMY1 257 aaKnown RBP9.99□□□□□ -0.81
SKAP2-201ENST00000345317 LEO1Q8WVC0 666 aaPredicted RBP9.99□□□□□ -0.81
SKAP2-201ENST00000345317 USP28Q96RU2 1077 aa9.99□□□□□ -0.81
SKAP2-201ENST00000345317 SEC63Q9UGP8 760 aaKnown RBP9.99□□□□□ -0.81
SKAP2-201ENST00000345317 SPTLC2O15270 562 aa9.99□□□□□ -0.81
SKAP2-201ENST00000345317 ZNF165P49910 485 aa9.99□□□□□ -0.81
SKAP2-201ENST00000345317 TXNRD3Q86VQ6 643 aa9.99□□□□□ -0.81
SKAP2-201ENST00000345317 PLA2G12BQ9BX93 195 aa9.99□□□□□ -0.81
SKAP2-201ENST00000345317 CCDC194A0A1B0GVG4 234 aa9.99□□□□□ -0.81
SKAP2-201ENST00000345317 EPB41L2O43491 1005 aaKnown RBP9.99□□□□□ -0.81
SKAP2-201ENST00000345317 PFKFB2O60825 505 aa9.99□□□□□ -0.81
SKAP2-201ENST00000345317 OFD1O75665 1012 aa9.99□□□□□ -0.81
SKAP2-201ENST00000345317 ANO6Q4KMQ2 910 aa9.99□□□□□ -0.81
SKAP2-201ENST00000345317 KRT40Q6A162 431 aa9.99□□□□□ -0.81
SKAP2-201ENST00000345317 CYB5R4Q7L1T6 521 aa9.99□□□□□ -0.81
SKAP2-201ENST00000345317 NLGN1Q8N2Q7 840 aa9.99□□□□□ -0.81
SKAP2-201ENST00000345317 NSUN7Q8NE18 718 aaKnown RBP9.99□□□□□ -0.81
SKAP2-201ENST00000345317 TMEM87BQ96K49 555 aa9.99□□□□□ -0.81
SKAP2-201ENST00000345317 HOOK1Q9UJC3 728 aaKnown RBP9.99□□□□□ -0.81
SKAP2-201ENST00000345317 SPATA31A6Q5VVP1 1343 aa9.98□□□□□ -0.81
SKAP2-201ENST00000345317 CACNB3P54284 484 aa9.98□□□□□ -0.81
SKAP2-201ENST00000345317 GRAPQ13588 217 aa9.98□□□□□ -0.81
SKAP2-201ENST00000345317 ZNF654Q8IZM8 581 aa9.98□□□□□ -0.81
SKAP2-201ENST00000345317 TMTC2Q8N394 836 aa9.98□□□□□ -0.81
SKAP2-201ENST00000345317 CNNM3Q8NE01 707 aa9.98□□□□□ -0.81
SKAP2-201ENST00000345317 GRAPLQ8TC17 118 aaPredicted RBP9.98□□□□□ -0.81
SKAP2-201ENST00000345317 PLIN2Q99541 437 aa9.98□□□□□ -0.81
SKAP2-201ENST00000345317 ZHX3Q9H4I2 956 aa9.98□□□□□ -0.81
SKAP2-201ENST00000345317 VGLL3A8MV65 326 aa9.98□□□□□ -0.81
SKAP2-201ENST00000345317 BTDP43251 543 aa9.98□□□□□ -0.81
SKAP2-201ENST00000345317 AFMP43652 599 aa9.98□□□□□ -0.81
SKAP2-201ENST00000345317 XDHP47989 1333 aa9.98□□□□□ -0.81
SKAP2-201ENST00000345317 ZNF772Q68DY9 489 aaPredicted RBP9.98□□□□□ -0.81
SKAP2-201ENST00000345317 PRR5LQ6MZQ0 368 aa9.98□□□□□ -0.81
SKAP2-201ENST00000345317 DIS3L2Q8IYB7 885 aaKnown RBP9.98□□□□□ -0.81
SKAP2-201ENST00000345317 NAT10Q9H0A0 1025 aaKnown RBP9.98□□□□□ -0.81
SKAP2-201ENST00000345317 NEDD4P46934 1319 aa9.98□□□□□ -0.81
SKAP2-201ENST00000345317 NMT2O60551 498 aa9.98□□□□□ -0.81
SKAP2-201ENST00000345317 APOA5Q6Q788 366 aa9.98□□□□□ -0.81
SKAP2-201ENST00000345317 GPCPD1Q9NPB8 672 aa9.98□□□□□ -0.81
SKAP2-201ENST00000345317 CGNQ9P2M7 1197 aaKnown RBP9.98□□□□□ -0.81
SKAP2-201ENST00000345317 RGPD5Q99666 1765 aa9.97□□□□□ -0.81
SKAP2-201ENST00000345317 ADCY5O95622 1261 aa9.97□□□□□ -0.81
SKAP2-201ENST00000345317 SERPINC1P01008 464 aa9.97□□□□□ -0.81
SKAP2-201ENST00000345317 KIF5BP33176 963 aa9.97□□□□□ -0.81
SKAP2-201ENST00000345317 LUZP1Q86V48 1076 aa9.97□□□□□ -0.81
SKAP2-201ENST00000345317 SLC44A5Q8NCS7 719 aa9.97□□□□□ -0.81
SKAP2-201ENST00000345317 SENP2Q9HC62 589 aa9.97□□□□□ -0.81
SKAP2-201ENST00000345317 ATF5Q9Y2D1 282 aaPredicted RBP9.97□□□□□ -0.81
SKAP2-201ENST00000345317 PPEF1O14829 653 aaPredicted RBP9.97□□□□□ -0.81
SKAP2-201ENST00000345317 HLA-DOAP06340 250 aa9.97□□□□□ -0.81
SKAP2-201ENST00000345317 ZNF174Q15697 407 aa9.97□□□□□ -0.81
SKAP2-201ENST00000345317 ZYXQ15942 572 aaKnown RBP9.97□□□□□ -0.81
SKAP2-201ENST00000345317 CEP57L1Q8IYX8 460 aa9.97□□□□□ -0.81
SKAP2-201ENST00000345317 PCMTD1Q96MG8 357 aaPredicted RBP9.97□□□□□ -0.81
SKAP2-201ENST00000345317 DDX19AQ9NUU7 478 aaKnown RBP9.97□□□□□ -0.81
SKAP2-201ENST00000345317 BTBD18B2RXH4 712 aa9.97□□□□□ -0.81
SKAP2-201ENST00000345317 RBM6P78332 1123 aaKnown RBP9.97□□□□□ -0.81
SKAP2-201ENST00000345317 MRPS27Q92552 414 aaKnown RBP9.97□□□□□ -0.81
SKAP2-201ENST00000345317 ZNF274Q96GC6 653 aaPredicted RBP9.97□□□□□ -0.81
SKAP2-201ENST00000345317 FSD2A1L4K1 749 aa9.96□□□□□ -0.81
SKAP2-201ENST00000345317 CHRNA5P30532 468 aa9.96□□□□□ -0.81
SKAP2-201ENST00000345317 SYKP43405 635 aa9.96□□□□□ -0.81
SKAP2-201ENST00000345317 MXD3Q9BW11 206 aa9.96□□□□□ -0.81
SKAP2-201ENST00000345317 USP40Q9NVE5 1235 aa9.96□□□□□ -0.81
SKAP2-201ENST00000345317 GSG1L2A8MUP6 293 aa9.96□□□□□ -0.82
SKAP2-201ENST00000345317 PPIP5K2O43314 1243 aa9.96□□□□□ -0.82
SKAP2-201ENST00000345317 NR1I2O75469 434 aa9.96□□□□□ -0.82
SKAP2-201ENST00000345317 MCM7P33993 719 aa9.96□□□□□ -0.82
SKAP2-201ENST00000345317 GPSM2P81274 684 aa9.96□□□□□ -0.82
SKAP2-201ENST00000345317 LARGE2Q8N3Y3 721 aa9.96□□□□□ -0.82
SKAP2-201ENST00000345317 OGFOD1Q8N543 542 aa9.96□□□□□ -0.82
SKAP2-201ENST00000345317 CPVLQ9H3G5 476 aa9.96□□□□□ -0.82
SKAP2-201ENST00000345317 LRRC4BQ9NT99 713 aa9.96□□□□□ -0.82
SKAP2-201ENST00000345317 TNS2Q63HR2 1409 aa9.96□□□□□ -0.82
SKAP2-201ENST00000345317 TXLNAP40222 546 aa9.96□□□□□ -0.82
SKAP2-201ENST00000345317 PAXIP1Q6ZW49 1069 aaPredicted RBP9.96□□□□□ -0.82
SKAP2-201ENST00000345317 SLC51AQ86UW1 340 aa9.96□□□□□ -0.82
SKAP2-201ENST00000345317 CDK5RAP3Q96JB5 506 aa9.96□□□□□ -0.82
SKAP2-201ENST00000345317 CCDC39Q9UFE4 941 aa9.96□□□□□ -0.82
SKAP2-201ENST00000345317 DYNC1I1O14576 645 aa9.95□□□□□ -0.82
SKAP2-201ENST00000345317 TNNT3P45378 269 aaPredicted RBP9.95□□□□□ -0.82
SKAP2-201ENST00000345317 FANCBQ8NB91 859 aa9.95□□□□□ -0.82
SKAP2-201ENST00000345317 STAMQ92783 540 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms