RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 ARMC9Q7Z3E5 817 aa25.09■■□□□ 1.61
SMARCB1-202ENST00000344921 SAPCD2Q86UD0 394 aa25.09■■□□□ 1.61
SMARCB1-202ENST00000344921 MAPKAPK5Q8IW41 473 aa25.09■■□□□ 1.61
SMARCB1-202ENST00000344921 AIDAQ96BJ3 306 aa25.09■■□□□ 1.61
SMARCB1-202ENST00000344921 HOOK2Q96ED9 719 aa25.09■■□□□ 1.61
SMARCB1-202ENST00000344921 MOB2Q70IA6 237 aa25.09■■□□□ 1.61
SMARCB1-202ENST00000344921 ARMT1Q9H993 441 aa25.09■■□□□ 1.61
SMARCB1-202ENST00000344921 ANGEL1Q9UNK9 670 aaKnown RBP25.09■■□□□ 1.61
SMARCB1-202ENST00000344921 RFX7Q2KHR2 1363 aa25.08■■□□□ 1.61
SMARCB1-202ENST00000344921 NPM3O75607 178 aaKnown RBP25.08■■□□□ 1.61
SMARCB1-202ENST00000344921 MBD4O95243 580 aa25.08■■□□□ 1.61
SMARCB1-202ENST00000344921 LCORLQ8N3X6 602 aa25.08■■□□□ 1.61
SMARCB1-202ENST00000344921 CSRNP1Q96S65 589 aa25.08■■□□□ 1.61
SMARCB1-202ENST00000344921 CRNKL1Q9BZJ0 848 aaKnown RBP25.08■■□□□ 1.61
SMARCB1-202ENST00000344921 PUS7LQ9H0K6 701 aaKnown RBP25.08■■□□□ 1.61
SMARCB1-202ENST00000344921 MKRN1Q9UHC7 482 aaKnown RBP25.08■■□□□ 1.61
SMARCB1-202ENST00000344921 RPAP1Q9BWH6 1393 aaPredicted RBP25.08■■□□□ 1.61
SMARCB1-202ENST00000344921 DEFB115Q30KQ5 88 aa25.07■■□□□ 1.6
SMARCB1-202ENST00000344921 APPBP2Q92624 585 aa25.07■■□□□ 1.6
SMARCB1-202ENST00000344921 OSBPL5Q9H0X9 879 aaPredicted RBP25.07■■□□□ 1.6
SMARCB1-202ENST00000344921 PAPPA2Q9BXP8 1791 aa25.07■■□□□ 1.6
SMARCB1-202ENST00000344921 SSC5DA1L4H1 1573 aa25.06■■□□□ 1.6
SMARCB1-202ENST00000344921 FLT1P17948 1338 aa25.06■■□□□ 1.6
SMARCB1-202ENST00000344921 UBE2Q2LH0YL09 131 aa25.06■■□□□ 1.6
SMARCB1-202ENST00000344921 MIGA2Q7L4E1 593 aa25.06■■□□□ 1.6
SMARCB1-202ENST00000344921 DDTLA6NHG4 134 aaPredicted RBP25.06■■□□□ 1.6
SMARCB1-202ENST00000344921 TTC22Q5TAA0 569 aa25.06■■□□□ 1.6
SMARCB1-202ENST00000344921 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.06■■□□□ 1.6
SMARCB1-202ENST00000344921 CDK5RAP2Q96SN8 1893 aa25.05■■□□□ 1.6
SMARCB1-202ENST00000344921 IREB2P48200 963 aaKnown RBP25.05■■□□□ 1.6
SMARCB1-202ENST00000344921 GRM1Q13255 1194 aa25.05■■□□□ 1.6
SMARCB1-202ENST00000344921 DCAF15Q66K64 600 aa25.05■■□□□ 1.6
SMARCB1-202ENST00000344921 OSBP2Q969R2 916 aa25.05■■□□□ 1.6
SMARCB1-202ENST00000344921 RASSF10A6NK89 507 aa25.04■■□□□ 1.6
SMARCB1-202ENST00000344921 SH3BP5LQ7L8J4 393 aa25.04■■□□□ 1.6
SMARCB1-202ENST00000344921 SAP30BPQ9UHR5 308 aaKnown RBP25.04■■□□□ 1.6
SMARCB1-202ENST00000344921 USP2O75604 605 aaPredicted RBP25.03■■□□□ 1.6
SMARCB1-202ENST00000344921 SDR42E1Q8WUS8 393 aa25.03■■□□□ 1.6
SMARCB1-202ENST00000344921 FOCADQ5VW36 1801 aa25.03■■□□□ 1.6
SMARCB1-202ENST00000344921 SLC4A8Q2Y0W8 1093 aa25.03■■□□□ 1.6
SMARCB1-202ENST00000344921 SKAP1Q86WV1 359 aa25.03■■□□□ 1.6
SMARCB1-202ENST00000344921 DHX36Q9H2U1 1008 aaKnown RBP25.03■■□□□ 1.6
SMARCB1-202ENST00000344921 PALD1Q9ULE6 856 aa25.03■■□□□ 1.6
SMARCB1-202ENST00000344921 ZMYM1Q5SVZ6 1142 aa25.02■■□□□ 1.6
SMARCB1-202ENST00000344921 SEC62Q99442 399 aaKnown RBP25.02■■□□□ 1.6
SMARCB1-202ENST00000344921 SLC4A4Q9Y6R1 1079 aa25.02■■□□□ 1.6
SMARCB1-202ENST00000344921 CEP350Q5VT06 3117 aa25.01■■□□□ 1.6
SMARCB1-202ENST00000344921 M0R2C6 588 aa25.01■■□□□ 1.59
SMARCB1-202ENST00000344921 GSPT1P15170 499 aaKnown RBP25.01■■□□□ 1.59
SMARCB1-202ENST00000344921 ZNF157P51786 506 aaPredicted RBP25.01■■□□□ 1.59
SMARCB1-202ENST00000344921 RGMBQ6NW40 437 aa25.01■■□□□ 1.59
SMARCB1-202ENST00000344921 DDRGK1Q96HY6 314 aa25.01■■□□□ 1.59
SMARCB1-202ENST00000344921 HHIPL1Q96JK4 782 aa25.01■■□□□ 1.59
SMARCB1-202ENST00000344921 ZNF341Q9BYN7 854 aa25.01■■□□□ 1.59
SMARCB1-202ENST00000344921 ATRNL1Q5VV63 1379 aa25.01■■□□□ 1.59
SMARCB1-202ENST00000344921 GPAA1O43292 621 aa25■■□□□ 1.59
SMARCB1-202ENST00000344921 PRKAB2O43741 272 aa25■■□□□ 1.59
SMARCB1-202ENST00000344921 MAP3K11Q16584 847 aa25■■□□□ 1.59
SMARCB1-202ENST00000344921 CYP4F22Q6NT55 531 aa25■■□□□ 1.59
SMARCB1-202ENST00000344921 HLA-DOAP06340 250 aa25■■□□□ 1.59
SMARCB1-202ENST00000344921 TICAM2Q86XR7 235 aa25■■□□□ 1.59
SMARCB1-202ENST00000344921 WRNIP1Q96S55 665 aa25■■□□□ 1.59
SMARCB1-202ENST00000344921 STRBPQ96SI9 672 aaKnown RBP25■■□□□ 1.59
SMARCB1-202ENST00000344921 PI4KBQ9UBF8 816 aa25■■□□□ 1.59
SMARCB1-202ENST00000344921 COL2A1P02458 1487 aaPredicted RBP24.99■■□□□ 1.59
SMARCB1-202ENST00000344921 POLR3DP05423 398 aaPredicted RBP24.99■■□□□ 1.59
SMARCB1-202ENST00000344921 SDSP20132 328 aa24.99■■□□□ 1.59
SMARCB1-202ENST00000344921 ECE1P42892 770 aa24.99■■□□□ 1.59
SMARCB1-202ENST00000344921 ANKRD13AQ8IZ07 590 aa24.99■■□□□ 1.59
SMARCB1-202ENST00000344921 KLRG1Q96E93 195 aa24.99■■□□□ 1.59
SMARCB1-202ENST00000344921 TRIM34Q9BYJ4 488 aa24.99■■□□□ 1.59
SMARCB1-202ENST00000344921 DCP1AQ9NPI6 582 aaPredicted RBP24.99■■□□□ 1.59
SMARCB1-202ENST00000344921 ATP8A2Q9NTI2 1148 aa24.99■■□□□ 1.59
SMARCB1-202ENST00000344921 MCM9Q9NXL9 1143 aa24.99■■□□□ 1.59
SMARCB1-202ENST00000344921 MYH1P12882 1939 aa24.99■■□□□ 1.59
SMARCB1-202ENST00000344921 LDLRAD1Q5T700 205 aa24.98■■□□□ 1.59
SMARCB1-202ENST00000344921 CRACR2BQ8N4Y2 399 aaPredicted RBP24.98■■□□□ 1.59
SMARCB1-202ENST00000344921 CAPNS2Q96L46 248 aa24.98■■□□□ 1.59
SMARCB1-202ENST00000344921 DIAPH3Q9NSV4 1193 aa24.98■■□□□ 1.59
SMARCB1-202ENST00000344921 APPP05067 770 aa24.98■■□□□ 1.59
SMARCB1-202ENST00000344921 VEGFBP49765 207 aa24.98■■□□□ 1.59
SMARCB1-202ENST00000344921 MAP3K9P80192 1104 aa24.98■■□□□ 1.59
SMARCB1-202ENST00000344921 DNAJC5GQ8N7S2 189 aa24.98■■□□□ 1.59
SMARCB1-202ENST00000344921 SLC10A4Q96EP9 437 aa24.98■■□□□ 1.59
SMARCB1-202ENST00000344921 FAM227BQ96M60 508 aa24.98■■□□□ 1.59
SMARCB1-202ENST00000344921 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.98■■□□□ 1.592e-8■■□□□ 13.5
SMARCB1-202ENST00000344921 HELLSQ9NRZ9 838 aa24.98■■□□□ 1.59
SMARCB1-202ENST00000344921 CSADQ9Y600 493 aa24.98■■□□□ 1.59
SMARCB1-202ENST00000344921 HIP1O00291 1037 aa24.97■■□□□ 1.59
SMARCB1-202ENST00000344921 SLURP2P0DP57 97 aa24.97■■□□□ 1.59
SMARCB1-202ENST00000344921 GNAT2P19087 354 aa24.97■■□□□ 1.59
SMARCB1-202ENST00000344921 NMIQ13287 307 aaPredicted RBP24.97■■□□□ 1.59
SMARCB1-202ENST00000344921 TTC6Q86TZ1 520 aa24.97■■□□□ 1.59
SMARCB1-202ENST00000344921 NAV1Q8NEY1 1877 aa24.96■■□□□ 1.59
SMARCB1-202ENST00000344921 AMOTL1Q8IY63 956 aa24.96■■□□□ 1.59
SMARCB1-202ENST00000344921 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.96■■□□□ 1.59
SMARCB1-202ENST00000344921 CCDC102AQ96A19 550 aa24.96■■□□□ 1.59
SMARCB1-202ENST00000344921 CLMNQ96JQ2 1002 aa24.96■■□□□ 1.59
SMARCB1-202ENST00000344921 WDR33Q9C0J8 1336 aaKnown RBP24.96■■□□□ 1.59
SMARCB1-202ENST00000344921 A0A0D9SFI3 127 aa24.95■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms