RNA–Protein interactions for RNA: ENST00000344893.4

AC008543.1-201, humanhuman

TSL 2 BASIC

Gene AC008543.1, Length 3,383 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008543.1-201ENST00000344893 RFC4P35249 363 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 CCDC57Q2TAC2 916 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 PRPF40BQ6NWY9 871 aaKnown RBP10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 CPLX2Q6PUV4 134 aaKnown RBP10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 HNRNPLLQ8WVV9 542 aaKnown RBP10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 CLIC6Q96NY7 704 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 ABCB6Q9NP58 842 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 CNNM1Q9NRU3 951 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 GNL3LQ9NVN8 582 aaKnown RBP10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 TLR7Q9NYK1 1049 aaKnown RBP10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 COL18A1P39060 1754 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 ZSCAN12O43309 604 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 HSP90B1P14625 803 aaKnown RBP10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 SETQ01105 290 aaPredicted RBP10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 DHX8Q14562 1220 aaKnown RBP10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 LRRC24Q50LG9 513 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 CLASRPQ8N2M8 674 aaKnown RBP10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 MIEF2Q96C03 454 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 ZSWIM6Q9HCJ5 1215 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 JAG2Q9Y219 1238 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 COL16A1Q07092 1604 aaPredicted RBP10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 NHSL1Q5SYE7 1610 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 IRS4O14654 1257 aaPredicted RBP10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 ERLIN1O75477 346 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 POTEAQ6S8J7 498 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 BARGINQ6ZT62 677 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 GOLPH3LQ9H4A5 285 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 CHMP4BP1P59074 171 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 GOLGA8FQ08AF8 430 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 GOLGA8DPQ0D2H9 430 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 SCRN1Q12765 414 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 TFCP2Q12800 502 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 CASP8Q14790 479 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 CCDC73Q6ZRK6 1079 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 DDX11Q96FC9 970 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 KAZALD1Q96I82 304 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 TEX13AQ9BXU3 409 aaPredicted RBP10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 ANKZF1Q9H8Y5 726 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 PPP2R2CQ9Y2T4 447 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 NEBLO76041 1014 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 CALRP27797 417 aaKnown RBP10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 TCIRG1Q13488 830 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 PNKPQ96T60 521 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 SLC24A3Q9HC58 644 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 PUF60Q9UHX1 559 aaKnown RBP10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 RTCBQ9Y3I0 505 aaKnown RBP10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 FAM169AQ9Y6X4 670 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 TUBGCP6Q96RT7 1819 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 C21orf2O43822 256 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 TAF5LO75529 589 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 ALDH1L1O75891 902 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 CCT5P48643 541 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 DEFB132Q7Z7B7 95 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 SEC31BQ9NQW1 1179 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 ELF1P32519 619 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 MSL3Q8N5Y2 521 aaKnown RBP10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 AFAP1L1Q8TED9 768 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 CNKSR2Q8WXI2 1034 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 SMARCC1Q92922 1105 aaPredicted RBP10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 FAXDC2Q96IV6 333 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 BCL9O00512 1426 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 RAB11FIP3O75154 756 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 WDHD1O75717 1129 aaPredicted RBP10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 CHGBP05060 677 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 USP5P45974 858 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 PTH1RQ03431 593 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 EN1Q05925 392 aaPredicted RBP10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 STK3Q13188 491 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 NEDD9Q14511 834 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 DPCR1Q3MIW9 517 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 SUSD4Q5VX71 490 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 NAIF1Q69YI7 327 aaPredicted RBP10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 INTS5Q6P9B9 1019 aaKnown RBP10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 LDHAL6AQ6ZMR3 332 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 TCEANC2Q96MN5 208 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 LRRC4BQ9NT99 713 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 RBM28Q9NW13 759 aaKnown RBP10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 CFAP45Q9UL16 551 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 RNF40O75150 1001 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 FKBP4Q02790 459 aaKnown RBP eCLIP10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 TTC19Q6DKK2 380 aaPredicted RBP10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 SLC51AQ86UW1 340 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 NBPF5PQ86XG9 351 aaPredicted RBP10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 JMYQ8N9B5 988 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 TBC1D22AQ8WUA7 517 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 CCDC12Q8WUD4 166 aaPredicted RBP10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 KIFC2Q96AC6 838 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 ACBD3Q9H3P7 528 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 GREM2Q9H772 168 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 MAP3K15Q6ZN16 1313 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 EBAG9O00559 213 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 LMOD1P29536 600 aaPredicted RBP10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 SRGAP1Q7Z6B7 1085 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 STAG1Q8WVM7 1258 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 N4BP2L2Q92802 583 aaPredicted RBP10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 TACO1Q9BSH4 297 aaKnown RBP10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 TM6SF1Q9BZW5 370 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 FTOQ9C0B1 505 aaKnown RBP eCLIP10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 RAB21Q9UL25 225 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms