RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 GOLGA6BA6NDN3 693 aa13.59□□□□□ -0.23
SEMA6A-202ENST00000343348 PTPROQ16827 1216 aa13.59□□□□□ -0.23
SEMA6A-202ENST00000343348 FNBP1Q96RU3 617 aa13.59□□□□□ -0.23
SEMA6A-202ENST00000343348 IL16Q14005 1332 aa13.59□□□□□ -0.23
SEMA6A-202ENST00000343348 VCX3BQ9H321 246 aa13.58□□□□□ -0.23
SEMA6A-202ENST00000343348 TACC3Q9Y6A5 838 aa13.58□□□□□ -0.23
SEMA6A-202ENST00000343348 CEP104O60308 925 aa13.58□□□□□ -0.24
SEMA6A-202ENST00000343348 MTX1Q13505 466 aa13.58□□□□□ -0.24
SEMA6A-202ENST00000343348 PCF11O94913 1555 aaKnown RBP13.58□□□□□ -0.24
SEMA6A-202ENST00000343348 DDX39AO00148 427 aaKnown RBP13.58□□□□□ -0.24
SEMA6A-202ENST00000343348 KSR2Q6VAB6 950 aa13.58□□□□□ -0.24
SEMA6A-202ENST00000343348 IFT20Q8IY31 132 aa13.58□□□□□ -0.24
SEMA6A-202ENST00000343348 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.58□□□□□ -0.24
SEMA6A-202ENST00000343348 TAF12Q16514 161 aa13.58□□□□□ -0.24
SEMA6A-202ENST00000343348 WDR44Q5JSH3 913 aa13.58□□□□□ -0.24
SEMA6A-202ENST00000343348 TAB2Q9NYJ8 693 aa13.58□□□□□ -0.24
SEMA6A-202ENST00000343348 ASIC3Q9UHC3 531 aa13.58□□□□□ -0.24
SEMA6A-202ENST00000343348 NPHP3Q7Z494 1330 aa13.58□□□□□ -0.24
SEMA6A-202ENST00000343348 CASQ2O14958 399 aaPredicted RBP13.58□□□□□ -0.24
SEMA6A-202ENST00000343348 TRIM68Q6AZZ1 485 aa13.58□□□□□ -0.24
SEMA6A-202ENST00000343348 HINFPQ9BQA5 517 aa13.58□□□□□ -0.24
SEMA6A-202ENST00000343348 NUF2Q9BZD4 464 aa13.58□□□□□ -0.24
SEMA6A-202ENST00000343348 ZNF75DP51815 510 aa13.58□□□□□ -0.24
SEMA6A-202ENST00000343348 DIXDC1Q155Q3 683 aa13.58□□□□□ -0.24
SEMA6A-202ENST00000343348 FCHSD1Q86WN1 690 aa13.58□□□□□ -0.24
SEMA6A-202ENST00000343348 MSANTD4Q8NCY6 345 aa13.58□□□□□ -0.24
SEMA6A-202ENST00000343348 STAMQ92783 540 aa13.58□□□□□ -0.24
SEMA6A-202ENST00000343348 MAP3K1Q13233 1512 aa13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 ZNF365Q70YC5 407 aa13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 ZNF804AQ7Z570 1209 aa13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 BAIAP2L1Q9UHR4 511 aa13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 DAPK3O43293 454 aa13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 GNA11P29992 359 aa13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 CSGALNACT2Q8N6G5 542 aa13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 MYO1AQ9UBC5 1043 aa13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 PARP1P09874 1014 aaKnown RBP13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 RPS6KB1P23443 525 aa13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 TXKP42681 527 aa13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 GUCY2FP51841 1108 aa13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 CCDC62Q6P9F0 684 aa13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 ARHGAP45Q92619 1136 aa13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 KIFAP3Q92845 792 aa13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 LRRC59Q96AG4 307 aaKnown RBP13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 CASC4Q6P4E1 433 aa13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 DYMQ7RTS9 669 aa13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 ANKRD42Q8N9B4 389 aa13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 NLRP3Q96P20 1036 aa13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 SLF1Q9BQI6 1058 aa13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 KCNH3Q9ULD8 1083 aa13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 ACTN4O43707 911 aaKnown RBP13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 MBD4O95243 580 aa13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 HHATQ5VTY9 493 aa13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 OTUD7AQ8TE49 926 aaPredicted RBP13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 SECISBP2LQ93073 1101 aaKnown RBP13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 POLKQ9UBT6 870 aa13.57□□□□□ -0.24
SEMA6A-202ENST00000343348 MSH6P52701 1360 aa13.56□□□□□ -0.24
SEMA6A-202ENST00000343348 STX10O60499 249 aa13.56□□□□□ -0.24
SEMA6A-202ENST00000343348 TRMT44Q8IYL2 757 aaKnown RBP13.56□□□□□ -0.24
SEMA6A-202ENST00000343348 DDX27Q96GQ7 796 aaKnown RBP13.56□□□□□ -0.24
SEMA6A-202ENST00000343348 RPL13P26373 211 aaKnown RBP13.56□□□□□ -0.24
SEMA6A-202ENST00000343348 TRIM6Q9C030 488 aaPredicted RBP13.56□□□□□ -0.24
SEMA6A-202ENST00000343348 TTLL3Q9Y4R7 772 aa13.56□□□□□ -0.24
SEMA6A-202ENST00000343348 OGFOD1Q8N543 542 aa13.56□□□□□ -0.24
SEMA6A-202ENST00000343348 CABS1Q96KC9 395 aa13.56□□□□□ -0.24
SEMA6A-202ENST00000343348 MYL10Q9BUA6 226 aa13.56□□□□□ -0.24
SEMA6A-202ENST00000343348 SCAF11Q99590 1463 aaKnown RBP13.56□□□□□ -0.24
SEMA6A-202ENST00000343348 MAN1A1P33908 653 aa13.56□□□□□ -0.24
SEMA6A-202ENST00000343348 NFATC2IPQ8NCF5 419 aa13.56□□□□□ -0.24
SEMA6A-202ENST00000343348 NOX5Q96PH1 765 aa13.56□□□□□ -0.24
SEMA6A-202ENST00000343348 TBC1D8O95759 1140 aa13.56□□□□□ -0.24
SEMA6A-202ENST00000343348 ANO1Q5XXA6 986 aa13.56□□□□□ -0.24
SEMA6A-202ENST00000343348 CLEC11AQ9Y240 323 aa13.56□□□□□ -0.24
SEMA6A-202ENST00000343348 hCG_1642624A0A1W2PR95 340 aa13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 SLC27A2O14975 620 aa13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 ZNF853P0CG23 659 aa13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 SND1Q7KZF4 910 aaKnown RBP eCLIP13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 GSDMBQ8TAX9 411 aa13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 ZCRB1Q8TBF4 217 aaKnown RBP13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 RILPQ96NA2 401 aa13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 BLZF1Q9H2G9 400 aa13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 NDUFB9Q9Y6M9 179 aa13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 ADKP55263 362 aaKnown RBP13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 MYRIPQ8NFW9 859 aa13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 HDAC9Q9UKV0 1011 aa13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 FAM184BQ9ULE4 1060 aa13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 GABPAQ06546 454 aa13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 UBL4BQ8N7F7 174 aa13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 PHKBQ93100 1093 aa13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 TTC41PQ6P2S7 1318 aa13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 FRMD3A2A2Y4 597 aa13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 GNAT2P19087 354 aa13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 SH2D4BQ5SQS7 431 aa13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 POTEDQ86YR6 584 aa13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 TIMM10P62072 90 aa13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 PAK1Q13153 545 aa13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 IDI1Q13907 227 aa13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 ERCC6LQ2NKX8 1250 aa13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 ARMT1Q9H993 441 aa13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 TTF2Q9UNY4 1162 aaKnown RBP13.55□□□□□ -0.24
SEMA6A-202ENST00000343348 NSFL1CQ9UNZ2 370 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms