RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 NTRK3Q16288 839 aa27.71■■■□□ 2.03
NELFB-201ENST00000343053 ZNF827Q17R98 1081 aa27.71■■■□□ 2.03
NELFB-201ENST00000343053 OGFRQ9NZT2 677 aa27.71■■■□□ 2.03
NELFB-201ENST00000343053 BTBD18B2RXH4 712 aa27.7■■■□□ 2.03
NELFB-201ENST00000343053 CDKL5O76039 1030 aa27.7■■■□□ 2.03
NELFB-201ENST00000343053 FAM177A1Q8N128 213 aaPredicted RBP27.7■■■□□ 2.03
NELFB-201ENST00000343053 STRBPQ96SI9 672 aaKnown RBP27.7■■■□□ 2.03
NELFB-201ENST00000343053 NAPBQ9H115 298 aa27.7■■■□□ 2.03
NELFB-201ENST00000343053 FANCLQ9NW38 375 aa27.7■■■□□ 2.03
NELFB-201ENST00000343053 DCCP43146 1447 aa27.7■■■□□ 2.02
NELFB-201ENST00000343053 SLU7O95391 586 aaKnown RBP27.7■■■□□ 2.02
NELFB-201ENST00000343053 PDE4BQ07343 736 aa27.7■■■□□ 2.02
NELFB-201ENST00000343053 ERCC6LQ2NKX8 1250 aa27.7■■■□□ 2.02
NELFB-201ENST00000343053 GRAMD1CQ8IYS0 662 aa27.7■■■□□ 2.02
NELFB-201ENST00000343053 CNNM3Q8NE01 707 aa27.7■■■□□ 2.02
NELFB-201ENST00000343053 SLC4A9Q96Q91 983 aa27.7■■■□□ 2.02
NELFB-201ENST00000343053 TMX1Q9H3N1 280 aa27.7■■■□□ 2.02
NELFB-201ENST00000343053 HPSEQ9Y251 543 aa27.7■■■□□ 2.02
NELFB-201ENST00000343053 FEZ1Q99689 392 aa27.69■■■□□ 2.02
NELFB-201ENST00000343053 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.69■■■□□ 2.02
NELFB-201ENST00000343053 PCDHA5Q9Y5H7 936 aa27.69■■■□□ 2.02
NELFB-201ENST00000343053 SLC12A7Q9Y666 1083 aa27.69■■■□□ 2.02
NELFB-201ENST00000343053 DDX41Q9UJV9 622 aaKnown RBP27.69■■■□□ 2.02
NELFB-201ENST00000343053 PLEKHG2Q9H7P9 1386 aa27.69■■■□□ 2.02
NELFB-201ENST00000343053 TCRBV5S4A2TA0A5A2 114 aa27.68■■■□□ 2.02
NELFB-201ENST00000343053 MYL5Q02045 173 aa27.68■■■□□ 2.02
NELFB-201ENST00000343053 TTF1Q15361 905 aaPredicted RBP27.68■■■□□ 2.02
NELFB-201ENST00000343053 PDILTQ8N807 584 aa27.68■■■□□ 2.02
NELFB-201ENST00000343053 PODXL2Q9NZ53 605 aa27.68■■■□□ 2.02
NELFB-201ENST00000343053 UBE3CQ15386 1083 aa27.68■■■□□ 2.02
NELFB-201ENST00000343053 ERO1AQ96HE7 468 aa27.68■■■□□ 2.02
NELFB-201ENST00000343053 TUBE1Q9UJT0 475 aa27.68■■■□□ 2.02
NELFB-201ENST00000343053 KCNH3Q9ULD8 1083 aa27.68■■■□□ 2.02
NELFB-201ENST00000343053 IQSEC3Q9UPP2 1182 aaPredicted RBP27.68■■■□□ 2.02
NELFB-201ENST00000343053 WDR19Q8NEZ3 1342 aa27.67■■■□□ 2.02
NELFB-201ENST00000343053 BMP6P22004 513 aa27.67■■■□□ 2.02
NELFB-201ENST00000343053 RESP18Q5W5W9 173 aa27.67■■■□□ 2.02
NELFB-201ENST00000343053 JMYQ8N9B5 988 aa27.67■■■□□ 2.02
NELFB-201ENST00000343053 MIGA1Q8NAN2 632 aa27.67■■■□□ 2.02
NELFB-201ENST00000343053 DNAI1Q9UI46 699 aa27.67■■■□□ 2.02
NELFB-201ENST00000343053 RASGRF1Q13972 1273 aa27.67■■■□□ 2.02
NELFB-201ENST00000343053 TRMT44Q8IYL2 757 aaKnown RBP27.67■■■□□ 2.02
NELFB-201ENST00000343053 IFNL3Q8IZI9 196 aa27.67■■■□□ 2.02
NELFB-201ENST00000343053 ZNF397Q8NF99 534 aaPredicted RBP27.67■■■□□ 2.02
NELFB-201ENST00000343053 UTP14AQ9BVJ6 771 aaKnown RBP27.67■■■□□ 2.02
NELFB-201ENST00000343053 PPP6R2O75170 966 aa27.66■■■□□ 2.02
NELFB-201ENST00000343053 ABCC12Q96J65 1359 aa27.66■■■□□ 2.02
NELFB-201ENST00000343053 SMIM22K7EJ46 135 aa27.65■■■□□ 2.02
NELFB-201ENST00000343053 SSRP1Q08945 709 aaKnown RBP27.65■■■□□ 2.02
NELFB-201ENST00000343053 NR5A1Q13285 461 aa27.65■■■□□ 2.02
NELFB-201ENST00000343053 UTP14CQ5TAP6 766 aaKnown RBP27.65■■■□□ 2.02
NELFB-201ENST00000343053 ST7Q9NRC1 585 aa27.65■■■□□ 2.02
NELFB-201ENST00000343053 IKBKBO14920 756 aa27.65■■■□□ 2.02
NELFB-201ENST00000343053 PRR29P0C7W0 189 aa27.65■■■□□ 2.02
NELFB-201ENST00000343053 KRBA2Q6ZNG9 492 aa27.65■■■□□ 2.02
NELFB-201ENST00000343053 SPATA5Q8NB90 893 aa27.65■■■□□ 2.02
NELFB-201ENST00000343053 NUP133Q8WUM0 1156 aa27.65■■■□□ 2.02
NELFB-201ENST00000343053 TMEM87BQ96K49 555 aa27.65■■■□□ 2.02
NELFB-201ENST00000343053 OLFM4Q6UX06 510 aa27.64■■■□□ 2.02
NELFB-201ENST00000343053 SEC31BQ9NQW1 1179 aa27.64■■■□□ 2.02
NELFB-201ENST00000343053 CDHR2Q9BYE9 1310 aa27.64■■■□□ 2.02
NELFB-201ENST00000343053 DIS3L2Q8IYB7 885 aaKnown RBP27.64■■■□□ 2.02
NELFB-201ENST00000343053 MYH3P11055 1940 aa27.64■■■□□ 2.02
NELFB-201ENST00000343053 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.64■■■□□ 2.01
NELFB-201ENST00000343053 TDO2P48775 406 aa27.64■■■□□ 2.01
NELFB-201ENST00000343053 LCORLQ8N3X6 602 aa27.64■■■□□ 2.01
NELFB-201ENST00000343053 ATRNO75882 1429 aa27.63■■■□□ 2.01
NELFB-201ENST00000343053 TOB1P50616 345 aaPredicted RBP27.63■■■□□ 2.01
NELFB-201ENST00000343053 TIGD1Q96MW7 591 aa27.63■■■□□ 2.01
NELFB-201ENST00000343053 hCG_1642624A0A1W2PR95 340 aa27.63■■■□□ 2.01
NELFB-201ENST00000343053 FANCGO15287 622 aa27.63■■■□□ 2.01
NELFB-201ENST00000343053 NRDCO43847 1150 aa27.63■■■□□ 2.01
NELFB-201ENST00000343053 TOP1P11387 765 aaKnown RBP27.63■■■□□ 2.01
NELFB-201ENST00000343053 ARID4AP29374 1257 aaPredicted RBP27.63■■■□□ 2.01
NELFB-201ENST00000343053 PUM3Q15397 648 aaKnown RBP27.63■■■□□ 2.01
NELFB-201ENST00000343053 INTS13Q9NVM9 706 aa27.63■■■□□ 2.01
NELFB-201ENST00000343053 POLR2DO15514 142 aaKnown RBP27.62■■■□□ 2.01
NELFB-201ENST00000343053 NOSTRINQ8IVI9 506 aa27.62■■■□□ 2.01
NELFB-201ENST00000343053 GTPBP4Q9BZE4 634 aaKnown RBP27.62■■■□□ 2.01
NELFB-201ENST00000343053 DZIP3Q86Y13 1208 aaKnown RBP27.62■■■□□ 2.01
NELFB-201ENST00000343053 KRI1Q8N9T8 703 aaKnown RBP27.62■■■□□ 2.01
NELFB-201ENST00000343053 PSDA5PKW4 1024 aaPredicted RBP27.61■■■□□ 2.01
NELFB-201ENST00000343053 PDE8AO60658 829 aa27.61■■■□□ 2.01
NELFB-201ENST00000343053 CYP19A1P11511 503 aaPredicted RBP27.61■■■□□ 2.01
NELFB-201ENST00000343053 USP49Q70CQ1 688 aa27.61■■■□□ 2.01
NELFB-201ENST00000343053 OXER1Q8TDS5 423 aa27.61■■■□□ 2.01
NELFB-201ENST00000343053 PCDHB6Q9Y5E3 794 aa27.61■■■□□ 2.01
NELFB-201ENST00000343053 CHD4Q14839 1912 aa27.61■■■□□ 2.01
NELFB-201ENST00000343053 CUTAO60888 179 aa27.61■■■□□ 2.01
NELFB-201ENST00000343053 FMR1Q06787 632 aaKnown RBP eCLIP27.61■■■□□ 2.012e-6■□□□□ 8.4
NELFB-201ENST00000343053 MFSD6Q6ZSS7 791 aa27.61■■■□□ 2.01
NELFB-201ENST00000343053 ZNF771Q7L3S4 317 aaPredicted RBP27.61■■■□□ 2.01
NELFB-201ENST00000343053 ZNF446Q9NWS9 450 aa27.61■■■□□ 2.01
NELFB-201ENST00000343053 SERTAD1Q9UHV2 236 aa27.61■■■□□ 2.01
NELFB-201ENST00000343053 GSG1L2A8MUP6 293 aa27.6■■■□□ 2.01
NELFB-201ENST00000343053 PATL2C9JE40 543 aaKnown RBP27.6■■■□□ 2.01
NELFB-201ENST00000343053 BCAMP50895 628 aa27.6■■■□□ 2.01
NELFB-201ENST00000343053 SGMS1Q86VZ5 419 aa27.6■■■□□ 2.01
NELFB-201ENST00000343053 LPIN2Q92539 896 aa27.6■■■□□ 2.01
NELFB-201ENST00000343053 KCND1Q9NSA2 647 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms