RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 HSP90B2PQ58FF3 399 aa17.41■□□□□ 0.38
SNX18-202ENST00000343017 CTR9Q6PD62 1173 aa17.41■□□□□ 0.38
SNX18-202ENST00000343017 KRT28Q7Z3Y7 464 aa17.41■□□□□ 0.38
SNX18-202ENST00000343017 SLC35F6Q8N357 371 aa17.41■□□□□ 0.38
SNX18-202ENST00000343017 HNRNPLLQ8WVV9 542 aaKnown RBP17.41■□□□□ 0.38
SNX18-202ENST00000343017 RAB21Q9UL25 225 aa17.41■□□□□ 0.38
SNX18-202ENST00000343017 EIF3JO75822 258 aaKnown RBP17.41■□□□□ 0.38
SNX18-202ENST00000343017 DDX58O95786 925 aaKnown RBP17.41■□□□□ 0.38
SNX18-202ENST00000343017 ATF3P18847 181 aa17.41■□□□□ 0.38
SNX18-202ENST00000343017 CORO7P57737 925 aa17.41■□□□□ 0.38
SNX18-202ENST00000343017 COPS6Q7L5N1 327 aa17.41■□□□□ 0.38
SNX18-202ENST00000343017 NKX2-3Q8TAU0 364 aa17.41■□□□□ 0.38
SNX18-202ENST00000343017 XAGE3Q8WTP9 111 aa17.41■□□□□ 0.38
SNX18-202ENST00000343017 DSCC1Q9BVC3 393 aa17.41■□□□□ 0.38
SNX18-202ENST00000343017 COPRSQ9NQ92 184 aa17.41■□□□□ 0.38
SNX18-202ENST00000343017 GRIN1Q05586 938 aa17.41■□□□□ 0.38
SNX18-202ENST00000343017 RBL2Q08999 1139 aa17.41■□□□□ 0.38
SNX18-202ENST00000343017 CCDC102BQ68D86 513 aa17.41■□□□□ 0.38
SNX18-202ENST00000343017 VPS37DQ86XT2 251 aa17.41■□□□□ 0.38
SNX18-202ENST00000343017 PHKBQ93100 1093 aa17.41■□□□□ 0.38
SNX18-202ENST00000343017 KCNH3Q9ULD8 1083 aa17.41■□□□□ 0.38
SNX18-202ENST00000343017 RNMTO43148 476 aaKnown RBP17.4■□□□□ 0.38
SNX18-202ENST00000343017 USP5P45974 858 aa17.4■□□□□ 0.38
SNX18-202ENST00000343017 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.4■□□□□ 0.38
SNX18-202ENST00000343017 ACRBPQ8NEB7 543 aa17.4■□□□□ 0.38
SNX18-202ENST00000343017 HINFPQ9BQA5 517 aa17.4■□□□□ 0.38
SNX18-202ENST00000343017 MAN1B1Q9UKM7 699 aa17.4■□□□□ 0.38
SNX18-202ENST00000343017 SH3TC1Q8TE82 1336 aa17.4■□□□□ 0.38
SNX18-202ENST00000343017 KIF5CO60282 957 aa17.4■□□□□ 0.38
SNX18-202ENST00000343017 COBLO75128 1261 aa17.4■□□□□ 0.38
SNX18-202ENST00000343017 ERLIN1O75477 346 aa17.4■□□□□ 0.38
SNX18-202ENST00000343017 GCP02774 474 aa17.4■□□□□ 0.38
SNX18-202ENST00000343017 PTPAQ15257 358 aa17.4■□□□□ 0.38
SNX18-202ENST00000343017 ZMYM1Q5SVZ6 1142 aa17.4■□□□□ 0.38
SNX18-202ENST00000343017 MSANTD4Q8NCY6 345 aa17.4■□□□□ 0.38
SNX18-202ENST00000343017 RAI14Q9P0K7 980 aa17.4■□□□□ 0.38
SNX18-202ENST00000343017 NCAPH2Q6IBW4 605 aa17.39■□□□□ 0.37
SNX18-202ENST00000343017 OSBP2Q969R2 916 aa17.39■□□□□ 0.37
SNX18-202ENST00000343017 YY1AP1Q9H869 796 aa17.39■□□□□ 0.37
SNX18-202ENST00000343017 SEC31BQ9NQW1 1179 aa17.39■□□□□ 0.37
SNX18-202ENST00000343017 GEMIN8Q9NWZ8 242 aaKnown RBP17.39■□□□□ 0.37
SNX18-202ENST00000343017 STX17P56962 302 aa17.39■□□□□ 0.37
SNX18-202ENST00000343017 NEXNQ0ZGT2 675 aa17.39■□□□□ 0.37
SNX18-202ENST00000343017 CEP112Q8N8E3 955 aa17.39■□□□□ 0.37
SNX18-202ENST00000343017 DDX21Q9NR30 783 aaKnown RBP eCLIP17.39■□□□□ 0.37
SNX18-202ENST00000343017 AKR1B15C9JRZ8 316 aaPredicted RBP17.38■□□□□ 0.37
SNX18-202ENST00000343017 SLC9C2Q5TAH2 1124 aa17.38■□□□□ 0.37
SNX18-202ENST00000343017 MICALL1Q8N3F8 863 aa17.38■□□□□ 0.37
SNX18-202ENST00000343017 ALG1Q9BT22 464 aa17.38■□□□□ 0.37
SNX18-202ENST00000343017 RNF40O75150 1001 aa17.38■□□□□ 0.37
SNX18-202ENST00000343017 RPS6KA5O75582 802 aa17.38■□□□□ 0.37
SNX18-202ENST00000343017 ZNF18P17022 549 aa17.38■□□□□ 0.37
SNX18-202ENST00000343017 ATP2B1P20020 1258 aa17.38■□□□□ 0.37
SNX18-202ENST00000343017 ANTXR2P58335 489 aa17.38■□□□□ 0.37
SNX18-202ENST00000343017 RESP18Q5W5W9 173 aa17.38■□□□□ 0.37
SNX18-202ENST00000343017 KLHL10Q6JEL2 608 aa17.38■□□□□ 0.37
SNX18-202ENST00000343017 PPM1EQ8WY54 764 aa17.38■□□□□ 0.37
SNX18-202ENST00000343017 HELLSQ9NRZ9 838 aa17.38■□□□□ 0.37
SNX18-202ENST00000343017 ZMYND10O75800 440 aa17.38■□□□□ 0.37
SNX18-202ENST00000343017 AKAP4Q5JQC9 854 aa17.38■□□□□ 0.37
SNX18-202ENST00000343017 KRT40Q6A162 431 aa17.38■□□□□ 0.37
SNX18-202ENST00000343017 AKAP17AQ02040 695 aaKnown RBP17.37■□□□□ 0.37
SNX18-202ENST00000343017 NR1I3Q14994 352 aa17.37■□□□□ 0.37
SNX18-202ENST00000343017 MAP3K14Q99558 947 aa17.37■□□□□ 0.37
SNX18-202ENST00000343017 SERTAD1Q9UHV2 236 aa17.37■□□□□ 0.37
SNX18-202ENST00000343017 CTAGE9A4FU28 777 aa17.36■□□□□ 0.37
SNX18-202ENST00000343017 MDM2Q00987 491 aaPredicted RBP17.36■□□□□ 0.37
SNX18-202ENST00000343017 FKBP4Q02790 459 aaKnown RBP eCLIP17.36■□□□□ 0.37
SNX18-202ENST00000343017 WASHC4Q2M389 1173 aa17.36■□□□□ 0.37
SNX18-202ENST00000343017 FAM71BQ8TC56 605 aa17.36■□□□□ 0.37
SNX18-202ENST00000343017 SENP2Q9HC62 589 aa17.36■□□□□ 0.37
SNX18-202ENST00000343017 FOXP2O15409 715 aa17.36■□□□□ 0.37
SNX18-202ENST00000343017 CHRNA2Q15822 529 aa17.36■□□□□ 0.37
SNX18-202ENST00000343017 PLEKHO1Q53GL0 409 aaPredicted RBP17.36■□□□□ 0.37
SNX18-202ENST00000343017 LMBR1LQ6UX01 489 aa17.36■□□□□ 0.37
SNX18-202ENST00000343017 IGSF22Q8N9C0 903 aa17.36■□□□□ 0.37
SNX18-202ENST00000343017 EHD4Q9H223 541 aa17.36■□□□□ 0.37
SNX18-202ENST00000343017 MKRN1Q9UHC7 482 aaKnown RBP17.36■□□□□ 0.37
SNX18-202ENST00000343017 CTAGE15A4D2H0 777 aa17.36■□□□□ 0.37
SNX18-202ENST00000343017 POLR2DO15514 142 aaKnown RBP17.36■□□□□ 0.37
SNX18-202ENST00000343017 SYF2O95926 243 aaKnown RBP17.36■□□□□ 0.37
SNX18-202ENST00000343017 FGAP02671 866 aa17.36■□□□□ 0.37
SNX18-202ENST00000343017 CTAGE8P0CG41 777 aa17.36■□□□□ 0.37
SNX18-202ENST00000343017 CASP1P29466 404 aa17.36■□□□□ 0.37
SNX18-202ENST00000343017 LIG3P49916 1009 aa17.36■□□□□ 0.37
SNX18-202ENST00000343017 C1orf141Q5JVX7 400 aa17.36■□□□□ 0.37
SNX18-202ENST00000343017 CTAGE6Q86UF2 777 aa17.36■□□□□ 0.37
SNX18-202ENST00000343017 CTAGE4Q8IX94 777 aa17.36■□□□□ 0.37
SNX18-202ENST00000343017 IP6K1Q92551 441 aa17.36■□□□□ 0.37
SNX18-202ENST00000343017 DEF6Q9H4E7 631 aa17.36■□□□□ 0.37
SNX18-202ENST00000343017 RNF113AO15541 343 aaKnown RBP17.35■□□□□ 0.37
SNX18-202ENST00000343017 CDC25AP30304 524 aa17.35■□□□□ 0.37
SNX18-202ENST00000343017 NCAPGQ9BPX3 1015 aa17.35■□□□□ 0.37
SNX18-202ENST00000343017 ANKARQ7Z5J8 1434 aa17.35■□□□□ 0.37
SNX18-202ENST00000343017 CASP14P31944 242 aa17.35■□□□□ 0.37
SNX18-202ENST00000343017 GSPT2Q8IYD1 628 aaKnown RBP17.35■□□□□ 0.37
SNX18-202ENST00000343017 MYL10Q9BUA6 226 aa17.35■□□□□ 0.37
SNX18-202ENST00000343017 AXIN2Q9Y2T1 843 aa17.35■□□□□ 0.37
SNX18-202ENST00000343017 CSB-PGBD3P0DP91 1061 aa17.34■□□□□ 0.37
SNX18-202ENST00000343017 USP49Q70CQ1 688 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms