RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 TOM1L2Q6ZVM7 507 aa9.46□□□□□ -0.89
CFAP54-201ENST00000342887 DDX54Q8TDD1 881 aaKnown RBP9.46□□□□□ -0.89
CFAP54-201ENST00000342887 PHF20Q9BVI0 1012 aa9.46□□□□□ -0.89
CFAP54-201ENST00000342887 FOXP1Q9H334 677 aaPredicted RBP9.46□□□□□ -0.89
CFAP54-201ENST00000342887 ZNF532Q9HCE3 1301 aa9.46□□□□□ -0.89
CFAP54-201ENST00000342887 KLRG2A4D1S0 409 aaPredicted RBP9.46□□□□□ -0.89
CFAP54-201ENST00000342887 NLRP12P59046 1061 aa9.46□□□□□ -0.89
CFAP54-201ENST00000342887 SBK1Q52WX2 424 aa9.46□□□□□ -0.89
CFAP54-201ENST00000342887 TRIM65Q6PJ69 517 aa9.46□□□□□ -0.89
CFAP54-201ENST00000342887 TTC12Q9H892 705 aaPredicted RBP9.46□□□□□ -0.89
CFAP54-201ENST00000342887 NRBP1Q9UHY1 535 aa9.46□□□□□ -0.89
CFAP54-201ENST00000342887 DTNBO60941 627 aa9.46□□□□□ -0.9
CFAP54-201ENST00000342887 MMP1P03956 469 aa9.46□□□□□ -0.9
CFAP54-201ENST00000342887 HSPA2P54652 639 aa9.46□□□□□ -0.9
CFAP54-201ENST00000342887 ARMCX5Q6P1M9 558 aa9.46□□□□□ -0.9
CFAP54-201ENST00000342887 C3orf67Q6ZVT6 689 aa9.46□□□□□ -0.9
CFAP54-201ENST00000342887 NOL8Q76FK4 1167 aaKnown RBP9.46□□□□□ -0.9
CFAP54-201ENST00000342887 MAP7D2Q96T17 732 aa9.46□□□□□ -0.9
CFAP54-201ENST00000342887 IRS4O14654 1257 aaPredicted RBP9.45□□□□□ -0.9
CFAP54-201ENST00000342887 ORC4O43929 436 aa9.45□□□□□ -0.9
CFAP54-201ENST00000342887 NEMFO60524 1076 aa9.45□□□□□ -0.9
CFAP54-201ENST00000342887 MORC3Q14149 939 aa9.45□□□□□ -0.9
CFAP54-201ENST00000342887 IFNL3Q8IZI9 196 aa9.45□□□□□ -0.9
CFAP54-201ENST00000342887 SPATA5Q8NB90 893 aa9.45□□□□□ -0.9
CFAP54-201ENST00000342887 TBC1D2BQ9UPU7 963 aa9.45□□□□□ -0.9
CFAP54-201ENST00000342887 SCN9AQ15858 1988 aa9.45□□□□□ -0.9
CFAP54-201ENST00000342887 SEMA3EO15041 775 aa9.45□□□□□ -0.9
CFAP54-201ENST00000342887 STARD3NLO95772 234 aa9.45□□□□□ -0.9
CFAP54-201ENST00000342887 PTPREP23469 700 aa9.45□□□□□ -0.9
CFAP54-201ENST00000342887 PPP2R5BQ15173 497 aa9.45□□□□□ -0.9
CFAP54-201ENST00000342887 FOXD4L5Q5VV16 416 aaPredicted RBP9.45□□□□□ -0.9
CFAP54-201ENST00000342887 E4F1Q66K89 784 aaPredicted RBP9.45□□□□□ -0.9
CFAP54-201ENST00000342887 CCAR1Q8IX12 1150 aaKnown RBP9.45□□□□□ -0.9
CFAP54-201ENST00000342887 FOXD4L4Q8WXT5 416 aaPredicted RBP9.45□□□□□ -0.9
CFAP54-201ENST00000342887 MRPS27Q92552 414 aaKnown RBP9.45□□□□□ -0.9
CFAP54-201ENST00000342887 TRIM44Q96DX7 344 aaPredicted RBP9.45□□□□□ -0.9
CFAP54-201ENST00000342887 DDX11Q96FC9 970 aa9.45□□□□□ -0.9
CFAP54-201ENST00000342887 DNAJC2Q99543 621 aaKnown RBP9.45□□□□□ -0.9
CFAP54-201ENST00000342887 CEP126Q9P2H0 1117 aa9.45□□□□□ -0.9
CFAP54-201ENST00000342887 IFIT5Q13325 482 aaKnown RBP9.45□□□□□ -0.9
CFAP54-201ENST00000342887 IMMTQ16891 758 aaKnown RBP9.45□□□□□ -0.9
CFAP54-201ENST00000342887 SLC35G1Q2M3R5 365 aa9.45□□□□□ -0.9
CFAP54-201ENST00000342887 COBLL1Q53SF7 1204 aa9.45□□□□□ -0.9
CFAP54-201ENST00000342887 ANO1Q5XXA6 986 aa9.45□□□□□ -0.9
CFAP54-201ENST00000342887 RNF214Q8ND24 703 aa9.45□□□□□ -0.9
CFAP54-201ENST00000342887 ZFP91Q96JP5 570 aaPredicted RBP9.45□□□□□ -0.9
CFAP54-201ENST00000342887 TNMDQ9H2S6 317 aa9.45□□□□□ -0.9
CFAP54-201ENST00000342887 SEC31BQ9NQW1 1179 aa9.45□□□□□ -0.9
CFAP54-201ENST00000342887 ZSWIM5Q9P217 1185 aa9.45□□□□□ -0.9
CFAP54-201ENST00000342887 PSDA5PKW4 1024 aaPredicted RBP9.44□□□□□ -0.9
CFAP54-201ENST00000342887 GNAT2P19087 354 aa9.44□□□□□ -0.9
CFAP54-201ENST00000342887 CUL4BQ13620 913 aa9.44□□□□□ -0.9
CFAP54-201ENST00000342887 LRRFIP1Q32MZ4 808 aaKnown RBP9.44□□□□□ -0.9
CFAP54-201ENST00000342887 MTERF4Q7Z6M4 381 aaKnown RBP9.44□□□□□ -0.9
CFAP54-201ENST00000342887 BSDC1Q9NW68 430 aaPredicted RBP9.44□□□□□ -0.9
CFAP54-201ENST00000342887 BTG4Q9NY30 223 aa9.44□□□□□ -0.9
CFAP54-201ENST00000342887 COL2A1P02458 1487 aaPredicted RBP9.44□□□□□ -0.9
CFAP54-201ENST00000342887 CRKLP46109 303 aaKnown RBP9.44□□□□□ -0.9
CFAP54-201ENST00000342887 NCBP1Q09161 790 aaKnown RBP9.44□□□□□ -0.9
CFAP54-201ENST00000342887 CCDC158Q5M9N0 1113 aa9.44□□□□□ -0.9
CFAP54-201ENST00000342887 CDKAL1Q5VV42 579 aa9.44□□□□□ -0.9
CFAP54-201ENST00000342887 FNBP4Q8N3X1 1017 aaPredicted RBP9.44□□□□□ -0.9
CFAP54-201ENST00000342887 ZNF396Q96N95 335 aaPredicted RBP9.44□□□□□ -0.9
CFAP54-201ENST00000342887 CCDC87Q9NVE4 849 aa9.44□□□□□ -0.9
CFAP54-201ENST00000342887 LRRC10BA6NIK2 292 aa9.44□□□□□ -0.9
CFAP54-201ENST00000342887 TROAPQ12815 778 aa9.44□□□□□ -0.9
CFAP54-201ENST00000342887 CCDC57Q2TAC2 916 aa9.44□□□□□ -0.9
CFAP54-201ENST00000342887 FCHSD1Q86WN1 690 aa9.44□□□□□ -0.9
CFAP54-201ENST00000342887 DHX37Q8IY37 1157 aaKnown RBP9.44□□□□□ -0.9
CFAP54-201ENST00000342887 TCP11L1Q9NUJ3 509 aa9.44□□□□□ -0.9
CFAP54-201ENST00000342887 CNTNAP5Q8WYK1 1306 aa9.43□□□□□ -0.9
CFAP54-201ENST00000342887 ANKRD18BA2A2Z9 1011 aa9.43□□□□□ -0.9
CFAP54-201ENST00000342887 PFKFB1P16118 471 aa9.43□□□□□ -0.9
CFAP54-201ENST00000342887 PTGS1P23219 599 aa9.43□□□□□ -0.9
CFAP54-201ENST00000342887 MAPK8IP2Q13387 824 aaPredicted RBP9.43□□□□□ -0.9
CFAP54-201ENST00000342887 DPCR1Q3MIW9 517 aa9.43□□□□□ -0.9
CFAP54-201ENST00000342887 RCSD1Q6JBY9 416 aa9.43□□□□□ -0.9
CFAP54-201ENST00000342887 CRACR2BQ8N4Y2 399 aaPredicted RBP9.43□□□□□ -0.9
CFAP54-201ENST00000342887 CERKQ8TCT0 537 aa9.43□□□□□ -0.9
CFAP54-201ENST00000342887 LRRC2Q9BYS8 371 aa9.43□□□□□ -0.9
CFAP54-201ENST00000342887 DNAJC25Q9H1X3 360 aa9.43□□□□□ -0.9
CFAP54-201ENST00000342887 TFIP11Q9UBB9 837 aaKnown RBP9.43□□□□□ -0.9
CFAP54-201ENST00000342887 EDIL3O43854 480 aa9.43□□□□□ -0.9
CFAP54-201ENST00000342887 MSNP26038 577 aaKnown RBP9.43□□□□□ -0.9
CFAP54-201ENST00000342887 SEMA3FQ13275 785 aa9.43□□□□□ -0.9
CFAP54-201ENST00000342887 FERMT3Q86UX7 667 aa9.43□□□□□ -0.9
CFAP54-201ENST00000342887 DAGLBQ8NCG7 672 aa9.43□□□□□ -0.9
CFAP54-201ENST00000342887 LINC00116Q8NCU8 138 aa9.43□□□□□ -0.9
CFAP54-201ENST00000342887 NOL10Q9BSC4 688 aaKnown RBP9.43□□□□□ -0.9
CFAP54-201ENST00000342887 STRN4Q9NRL3 753 aa9.43□□□□□ -0.9
CFAP54-201ENST00000342887 PHIPQ8WWQ0 1821 aa9.43□□□□□ -0.9
CFAP54-201ENST00000342887 A0A087X0B3 334 aa9.43□□□□□ -0.9
CFAP54-201ENST00000342887 UQCRHLA0A096LP55 91 aa9.43□□□□□ -0.9
CFAP54-201ENST00000342887 VPS37CA5D8V6 355 aaPredicted RBP9.43□□□□□ -0.9
CFAP54-201ENST00000342887 UQCRHP07919 91 aa9.43□□□□□ -0.9
CFAP54-201ENST00000342887 AKNAD1Q5T1N1 836 aa9.43□□□□□ -0.9
CFAP54-201ENST00000342887 KIF6Q6ZMV9 814 aa9.43□□□□□ -0.9
CFAP54-201ENST00000342887 DOCK5Q9H7D0 1870 aa9.42□□□□□ -0.9
CFAP54-201ENST00000342887 USP27XA6NNY8 438 aa9.42□□□□□ -0.9
CFAP54-201ENST00000342887 UBE2Q2LH0YL09 131 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms