RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 CDAN1Q8IWY9 1227 aa16.84■□□□□ 0.29
UBE3B-202ENST00000342494 GUCA1BQ9UMX6 200 aa16.84■□□□□ 0.29
UBE3B-202ENST00000342494 DNM2P50570 870 aa16.83■□□□□ 0.29
UBE3B-202ENST00000342494 TNFAIP1Q13829 316 aa16.83■□□□□ 0.29
UBE3B-202ENST00000342494 SNX21Q969T3 373 aa16.83■□□□□ 0.29
UBE3B-202ENST00000342494 TGFBRAP1Q8WUH2 860 aa16.83■□□□□ 0.28
UBE3B-202ENST00000342494 CFBP00751 764 aa16.83■□□□□ 0.28
UBE3B-202ENST00000342494 IL13P35225 146 aa16.83■□□□□ 0.28
UBE3B-202ENST00000342494 PROCA1Q8NCQ7 364 aaPredicted RBP16.83■□□□□ 0.28
UBE3B-202ENST00000342494 LEO1Q8WVC0 666 aaPredicted RBP16.83■□□□□ 0.28
UBE3B-202ENST00000342494 LPXNO60711 386 aa16.83■□□□□ 0.28
UBE3B-202ENST00000342494 RPS6KB1P23443 525 aa16.83■□□□□ 0.28
UBE3B-202ENST00000342494 PPP1R7Q15435 360 aa16.83■□□□□ 0.28
UBE3B-202ENST00000342494 NSRP1Q9H0G5 558 aaKnown RBP16.83■□□□□ 0.28
UBE3B-202ENST00000342494 MTUS1Q9ULD2 1270 aa16.83■□□□□ 0.28
UBE3B-202ENST00000342494 ELP1O95163 1332 aa16.83■□□□□ 0.28
UBE3B-202ENST00000342494 BMS1Q14692 1282 aaKnown RBP16.82■□□□□ 0.28
UBE3B-202ENST00000342494 ATL3Q6DD88 541 aa16.82■□□□□ 0.28
UBE3B-202ENST00000342494 KIFC2Q96AC6 838 aa16.82■□□□□ 0.28
UBE3B-202ENST00000342494 CCDC114Q96M63 670 aa16.82■□□□□ 0.28
UBE3B-202ENST00000342494 TESK2Q96S53 571 aa16.82■□□□□ 0.28
UBE3B-202ENST00000342494 STK24Q9Y6E0 443 aa16.82■□□□□ 0.28
UBE3B-202ENST00000342494 RPS8P62241 208 aaKnown RBP16.82■□□□□ 0.28
UBE3B-202ENST00000342494 GTF2IP78347 998 aa16.82■□□□□ 0.28
UBE3B-202ENST00000342494 CNNM4Q6P4Q7 775 aa16.82■□□□□ 0.28
UBE3B-202ENST00000342494 MAEAQ7L5Y9 396 aa16.82■□□□□ 0.28
UBE3B-202ENST00000342494 GIMAP7Q8NHV1 300 aa16.82■□□□□ 0.28
UBE3B-202ENST00000342494 ZNF496Q96IT1 587 aaPredicted RBP16.82■□□□□ 0.28
UBE3B-202ENST00000342494 KRT9P35527 623 aa16.82■□□□□ 0.28
UBE3B-202ENST00000342494 PPP1R9BQ96SB3 815 aa16.82■□□□□ 0.28
UBE3B-202ENST00000342494 NOC4LQ9BVI4 516 aaKnown RBP16.82■□□□□ 0.28
UBE3B-202ENST00000342494 SPC25Q9HBM1 224 aa16.82■□□□□ 0.28
UBE3B-202ENST00000342494 GCKRQ14397 625 aa16.81■□□□□ 0.28
UBE3B-202ENST00000342494 NONOQ15233 471 aaKnown RBP eCLIP16.81■□□□□ 0.28
UBE3B-202ENST00000342494 SUCLG2Q96I99 432 aa16.81■□□□□ 0.28
UBE3B-202ENST00000342494 ZNF830Q96NB3 372 aaPredicted RBP16.81■□□□□ 0.28
UBE3B-202ENST00000342494 CALUO43852 315 aaPredicted RBP16.81■□□□□ 0.28
UBE3B-202ENST00000342494 NOX5Q96PH1 765 aa16.81■□□□□ 0.28
UBE3B-202ENST00000342494 NACA2Q9H009 215 aa16.81■□□□□ 0.28
UBE3B-202ENST00000342494 SLC5A4Q9NY91 659 aa16.81■□□□□ 0.28
UBE3B-202ENST00000342494 AGTPBP1Q9UPW5 1226 aa16.81■□□□□ 0.28
UBE3B-202ENST00000342494 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.81■□□□□ 0.28
UBE3B-202ENST00000342494 ATP10AO60312 1499 aa16.81■□□□□ 0.28
UBE3B-202ENST00000342494 CPA1P15085 419 aa16.81■□□□□ 0.28
UBE3B-202ENST00000342494 CAPZA3Q96KX2 299 aa16.81■□□□□ 0.28
UBE3B-202ENST00000342494 USP40Q9NVE5 1235 aa16.81■□□□□ 0.28
UBE3B-202ENST00000342494 TTF2Q9UNY4 1162 aaKnown RBP16.81■□□□□ 0.28
UBE3B-202ENST00000342494 SEL1L2Q5TEA6 688 aa16.81■□□□□ 0.28
UBE3B-202ENST00000342494 TEKT1Q969V4 418 aa16.81■□□□□ 0.28
UBE3B-202ENST00000342494 IBTKQ9P2D0 1353 aaPredicted RBP16.81■□□□□ 0.28
UBE3B-202ENST00000342494 A0A1B0GVL5 298 aa16.81■□□□□ 0.28
UBE3B-202ENST00000342494 CTDSPL2Q05D32 466 aa16.81■□□□□ 0.28
UBE3B-202ENST00000342494 KRT25Q7Z3Z0 450 aa16.81■□□□□ 0.28
UBE3B-202ENST00000342494 ODF2LQ9ULJ1 636 aa16.81■□□□□ 0.28
UBE3B-202ENST00000342494 ERVV-2B6SEH9 535 aa16.8■□□□□ 0.28
UBE3B-202ENST00000342494 SLC27A2O14975 620 aa16.8■□□□□ 0.28
UBE3B-202ENST00000342494 RASA3Q14644 834 aa16.8■□□□□ 0.28
UBE3B-202ENST00000342494 INF2Q27J81 1249 aa16.8■□□□□ 0.28
UBE3B-202ENST00000342494 SPOUT1Q5T280 376 aaKnown RBP16.8■□□□□ 0.28
UBE3B-202ENST00000342494 INTS4Q96HW7 963 aaKnown RBP16.8■□□□□ 0.28
UBE3B-202ENST00000342494 AS3MTQ9HBK9 375 aa16.8■□□□□ 0.28
UBE3B-202ENST00000342494 SLU7O95391 586 aaKnown RBP16.8■□□□□ 0.28
UBE3B-202ENST00000342494 TNFAIP3P21580 790 aa16.8■□□□□ 0.28
UBE3B-202ENST00000342494 MFSD14BQ5SR56 506 aa16.8■□□□□ 0.28
UBE3B-202ENST00000342494 LZTS2Q9BRK4 669 aa16.8■□□□□ 0.28
UBE3B-202ENST00000342494 IFNKQ9P0W0 207 aa16.8■□□□□ 0.28
UBE3B-202ENST00000342494 PIK3C2GO75747 1445 aa16.8■□□□□ 0.28
UBE3B-202ENST00000342494 PTPRKQ15262 1439 aa16.8■□□□□ 0.28
UBE3B-202ENST00000342494 CFAP58Q5T655 872 aa16.8■□□□□ 0.28
UBE3B-202ENST00000342494 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.8■□□□□ 0.28
UBE3B-202ENST00000342494 MTRF1LQ9UGC7 380 aaKnown RBP16.8■□□□□ 0.28
UBE3B-202ENST00000342494 CTNND2Q9UQB3 1225 aa16.8■□□□□ 0.28
UBE3B-202ENST00000342494 GTF2F1P35269 517 aaKnown RBP eCLIP16.8■□□□□ 0.28
UBE3B-202ENST00000342494 CALCOCO2Q13137 446 aa16.8■□□□□ 0.28
UBE3B-202ENST00000342494 ARHGAP27Q6ZUM4 889 aa16.8■□□□□ 0.28
UBE3B-202ENST00000342494 CCDC25Q86WR0 208 aa16.8■□□□□ 0.28
UBE3B-202ENST00000342494 KBTBD3Q8NAB2 608 aa16.8■□□□□ 0.28
UBE3B-202ENST00000342494 DDX23Q9BUQ8 820 aaKnown RBP16.8■□□□□ 0.28
UBE3B-202ENST00000342494 ARFGAP3Q9NP61 516 aa16.8■□□□□ 0.28
UBE3B-202ENST00000342494 ATP2C2O75185 946 aa16.79■□□□□ 0.28
UBE3B-202ENST00000342494 SMC5Q8IY18 1101 aa16.79■□□□□ 0.28
UBE3B-202ENST00000342494 SNX29Q8TEQ0 813 aa16.79■□□□□ 0.28
UBE3B-202ENST00000342494 LZTFL1Q9NQ48 299 aa16.79■□□□□ 0.28
UBE3B-202ENST00000342494 LRWD1Q9UFC0 647 aa16.79■□□□□ 0.28
UBE3B-202ENST00000342494 USP19O94966 1318 aa16.79■□□□□ 0.28
UBE3B-202ENST00000342494 ZNF532Q9HCE3 1301 aa16.79■□□□□ 0.28
UBE3B-202ENST00000342494 CETN3O15182 167 aa16.79■□□□□ 0.28
UBE3B-202ENST00000342494 DAPK3O43293 454 aa16.79■□□□□ 0.28
UBE3B-202ENST00000342494 DIS3L2Q8IYB7 885 aaKnown RBP16.79■□□□□ 0.28
UBE3B-202ENST00000342494 SPOPO43791 374 aa16.79■□□□□ 0.28
UBE3B-202ENST00000342494 ZBTB16Q05516 673 aa16.79■□□□□ 0.28
UBE3B-202ENST00000342494 TTC38Q5R3I4 469 aa16.79■□□□□ 0.28
UBE3B-202ENST00000342494 CNGA4Q8IV77 575 aa16.79■□□□□ 0.28
UBE3B-202ENST00000342494 TTC14Q96N46 770 aa16.79■□□□□ 0.28
UBE3B-202ENST00000342494 HAUS7Q99871 368 aa16.79■□□□□ 0.28
UBE3B-202ENST00000342494 PAGR1Q9BTK6 254 aa16.79■□□□□ 0.28
UBE3B-202ENST00000342494 TBC1D8BQ0IIM8 1120 aa16.79■□□□□ 0.28
UBE3B-202ENST00000342494 KIF22Q14807 665 aa16.79■□□□□ 0.28
UBE3B-202ENST00000342494 KARSQ15046 597 aaKnown RBP16.79■□□□□ 0.28
UBE3B-202ENST00000342494 VWA3BQ502W6 1294 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms