RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 IGDCC4Q8TDY8 1250 aa8.41□□□□□ -1.06
PTPRR-202ENST00000342084 AIDAQ96BJ3 306 aa8.41□□□□□ -1.06
PTPRR-202ENST00000342084 PPP1R13BQ96KQ4 1090 aa8.41□□□□□ -1.06
PTPRR-202ENST00000342084 STRBPQ96SI9 672 aaKnown RBP8.41□□□□□ -1.06
PTPRR-202ENST00000342084 KCNJ14Q9UNX9 436 aa8.41□□□□□ -1.06
PTPRR-202ENST00000342084 ATRNO75882 1429 aa8.41□□□□□ -1.06
PTPRR-202ENST00000342084 IFIT3O14879 490 aaKnown RBP8.41□□□□□ -1.06
PTPRR-202ENST00000342084 CYP19A1P11511 503 aaPredicted RBP8.41□□□□□ -1.06
PTPRR-202ENST00000342084 IARSP41252 1262 aaKnown RBP8.41□□□□□ -1.06
PTPRR-202ENST00000342084 PDE4BQ07343 736 aa8.41□□□□□ -1.06
PTPRR-202ENST00000342084 RASGRF1Q13972 1273 aa8.41□□□□□ -1.06
PTPRR-202ENST00000342084 ELF2Q15723 593 aa8.41□□□□□ -1.06
PTPRR-202ENST00000342084 NTRK3Q16288 839 aa8.41□□□□□ -1.06
PTPRR-202ENST00000342084 METTL16Q86W50 562 aaKnown RBP8.41□□□□□ -1.06
PTPRR-202ENST00000342084 IFNL3Q8IZI9 196 aa8.41□□□□□ -1.06
PTPRR-202ENST00000342084 CHMP4CQ96CF2 233 aa8.41□□□□□ -1.06
PTPRR-202ENST00000342084 MAP3K14Q99558 947 aa8.41□□□□□ -1.06
PTPRR-202ENST00000342084 BPIFA3Q9BQP9 254 aa8.41□□□□□ -1.06
PTPRR-202ENST00000342084 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.41□□□□□ -1.06
PTPRR-202ENST00000342084 OSBPL5Q9H0X9 879 aaPredicted RBP8.41□□□□□ -1.06
PTPRR-202ENST00000342084 SEC31BQ9NQW1 1179 aa8.41□□□□□ -1.06
PTPRR-202ENST00000342084 TOMM22Q9NS69 142 aa8.41□□□□□ -1.06
PTPRR-202ENST00000342084 ZSWIM5Q9P217 1185 aa8.41□□□□□ -1.06
PTPRR-202ENST00000342084 CDHR2Q9BYE9 1310 aa8.4□□□□□ -1.06
PTPRR-202ENST00000342084 ABCC12Q96J65 1359 aa8.4□□□□□ -1.06
PTPRR-202ENST00000342084 GSDMDP57764 484 aa8.4□□□□□ -1.06
PTPRR-202ENST00000342084 UBE3CQ15386 1083 aa8.4□□□□□ -1.06
PTPRR-202ENST00000342084 ZNF827Q17R98 1081 aa8.4□□□□□ -1.06
PTPRR-202ENST00000342084 SYT10Q6XYQ8 523 aa8.4□□□□□ -1.06
PTPRR-202ENST00000342084 FOXP4Q8IVH2 680 aaPredicted RBP8.4□□□□□ -1.06
PTPRR-202ENST00000342084 GRAMD1CQ8IYS0 662 aa8.4□□□□□ -1.06
PTPRR-202ENST00000342084 LCORLQ8N3X6 602 aa8.4□□□□□ -1.06
PTPRR-202ENST00000342084 MIGA1Q8NAN2 632 aa8.4□□□□□ -1.06
PTPRR-202ENST00000342084 SPATA5Q8NB90 893 aa8.4□□□□□ -1.06
PTPRR-202ENST00000342084 BTG4Q9NY30 223 aa8.4□□□□□ -1.06
PTPRR-202ENST00000342084 IQSEC3Q9UPP2 1182 aaPredicted RBP8.4□□□□□ -1.06
PTPRR-202ENST00000342084 HPSEQ9Y251 543 aa8.4□□□□□ -1.06
PTPRR-202ENST00000342084 WDR19Q8NEZ3 1342 aa8.4□□□□□ -1.07
PTPRR-202ENST00000342084 LRP6O75581 1613 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 BTBD18B2RXH4 712 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 PRR29P0C7W0 189 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 ATP2B1P20020 1258 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 BMP6P22004 513 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 SFPQP23246 707 aaKnown RBP eCLIP8.39□□□□□ -1.07
PTPRR-202ENST00000342084 ARID4AP29374 1257 aaPredicted RBP8.39□□□□□ -1.07
PTPRR-202ENST00000342084 DMTNQ08495 405 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 TTF1Q15361 905 aaPredicted RBP8.39□□□□□ -1.07
PTPRR-202ENST00000342084 RESP18Q5W5W9 173 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 DZIP3Q86Y13 1208 aaKnown RBP8.39□□□□□ -1.07
PTPRR-202ENST00000342084 NAPBQ9H115 298 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 SLAIN2Q9P270 581 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 hCG_1642624A0A1W2PR95 340 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 PDE8AO60658 829 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 CDKL5O76039 1030 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 SERPINC1P01008 464 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 FGFR2P21802 821 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 BCAMP50895 628 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 TPM4P67936 248 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 SSRP1Q08945 709 aaKnown RBP8.39□□□□□ -1.07
PTPRR-202ENST00000342084 NR5A1Q13285 461 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 TRIM29Q14134 588 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 PUM3Q15397 648 aaKnown RBP8.39□□□□□ -1.07
PTPRR-202ENST00000342084 KMT5BQ4FZB7 885 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 CPLX2Q6PUV4 134 aaKnown RBP8.39□□□□□ -1.07
PTPRR-202ENST00000342084 TRMT44Q8IYL2 757 aaKnown RBP8.39□□□□□ -1.07
PTPRR-202ENST00000342084 CCDC150Q8NCX0 1101 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 CNNM3Q8NE01 707 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 TMX1Q9H3N1 280 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 FANCLQ9NW38 375 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 IMPACTQ9P2X3 320 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 TUBE1Q9UJT0 475 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 SLC12A7Q9Y666 1083 aa8.39□□□□□ -1.07
PTPRR-202ENST00000342084 ZNF335Q9H4Z2 1342 aaPredicted RBP8.39□□□□□ -1.07
PTPRR-202ENST00000342084 ITGB4P16144 1822 aa8.38□□□□□ -1.07
PTPRR-202ENST00000342084 KDM4FA0A1W2PPD8 638 aa8.38□□□□□ -1.07
PTPRR-202ENST00000342084 FAM205CA6NFA0 338 aa8.38□□□□□ -1.07
PTPRR-202ENST00000342084 WTIPA6NIX2 430 aaPredicted RBP8.38□□□□□ -1.07
PTPRR-202ENST00000342084 GSG1L2A8MUP6 293 aa8.38□□□□□ -1.07
PTPRR-202ENST00000342084 PPP6R2O75170 966 aa8.38□□□□□ -1.07
PTPRR-202ENST00000342084 TDO2P48775 406 aa8.38□□□□□ -1.07
PTPRR-202ENST00000342084 TOB1P50616 345 aaPredicted RBP8.38□□□□□ -1.07
PTPRR-202ENST00000342084 UBASH3AP57075 661 aa8.38□□□□□ -1.07
PTPRR-202ENST00000342084 MYL5Q02045 173 aa8.38□□□□□ -1.07
PTPRR-202ENST00000342084 CFAP100Q494V2 611 aa8.38□□□□□ -1.07
PTPRR-202ENST00000342084 SUSD4Q5VX71 490 aa8.38□□□□□ -1.07
PTPRR-202ENST00000342084 FBXO38Q6PIJ6 1188 aa8.38□□□□□ -1.07
PTPRR-202ENST00000342084 KRBA2Q6ZNG9 492 aa8.38□□□□□ -1.07
PTPRR-202ENST00000342084 DIS3L2Q8IYB7 885 aaKnown RBP8.38□□□□□ -1.07
PTPRR-202ENST00000342084 PDILTQ8N807 584 aa8.38□□□□□ -1.07
PTPRR-202ENST00000342084 KIF18AQ8NI77 898 aa8.38□□□□□ -1.07
PTPRR-202ENST00000342084 OXER1Q8TDS5 423 aa8.38□□□□□ -1.07
PTPRR-202ENST00000342084 NUP133Q8WUM0 1156 aa8.38□□□□□ -1.07
PTPRR-202ENST00000342084 LPIN2Q92539 896 aa8.38□□□□□ -1.07
PTPRR-202ENST00000342084 TMEM87BQ96K49 555 aa8.38□□□□□ -1.07
PTPRR-202ENST00000342084 ZNF512BQ96KM6 892 aaPredicted RBP8.38□□□□□ -1.07
PTPRR-202ENST00000342084 TEX13AQ9BXU3 409 aaPredicted RBP8.38□□□□□ -1.07
PTPRR-202ENST00000342084 CGNQ9P2M7 1197 aaKnown RBP8.38□□□□□ -1.07
PTPRR-202ENST00000342084 KCNH3Q9ULD8 1083 aa8.38□□□□□ -1.07
PTPRR-202ENST00000342084 PCDHA5Q9Y5H7 936 aa8.38□□□□□ -1.07
PTPRR-202ENST00000342084 KAT6BQ8WYB5 2073 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms