RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 ENTPD3O75355 529 aa18.68■□□□□ 0.58
TNFRSF12A-202ENST00000341627 USP2O75604 605 aaPredicted RBP18.68■□□□□ 0.58
TNFRSF12A-202ENST00000341627 RHBDL3P58872 404 aa18.68■□□□□ 0.58
TNFRSF12A-202ENST00000341627 PPP4CP60510 307 aa18.68■□□□□ 0.58
TNFRSF12A-202ENST00000341627 TCP10Q12799 353 aa18.68■□□□□ 0.58
TNFRSF12A-202ENST00000341627 NFIAQ12857 509 aa18.68■□□□□ 0.58
TNFRSF12A-202ENST00000341627 SLC9C2Q5TAH2 1124 aa18.68■□□□□ 0.58
TNFRSF12A-202ENST00000341627 EDC3Q96F86 508 aaKnown RBP18.68■□□□□ 0.58
TNFRSF12A-202ENST00000341627 RPAP1Q9BWH6 1393 aaPredicted RBP18.68■□□□□ 0.58
TNFRSF12A-202ENST00000341627 DOCK2Q92608 1830 aa18.67■□□□□ 0.58
TNFRSF12A-202ENST00000341627 PDE6AP16499 860 aa18.67■□□□□ 0.58
TNFRSF12A-202ENST00000341627 RGS3P49796 1198 aa18.67■□□□□ 0.58
TNFRSF12A-202ENST00000341627 ZSCAN25Q6NSZ9 544 aa18.67■□□□□ 0.58
TNFRSF12A-202ENST00000341627 ADGRA1Q86SQ6 560 aa18.67■□□□□ 0.58
TNFRSF12A-202ENST00000341627 TEX11Q8IYF3 940 aa18.67■□□□□ 0.58
TNFRSF12A-202ENST00000341627 CLMNQ96JQ2 1002 aa18.67■□□□□ 0.58
TNFRSF12A-202ENST00000341627 RNF186Q9NXI6 227 aa18.67■□□□□ 0.58
TNFRSF12A-202ENST00000341627 FAM198AQ9UFP1 575 aa18.67■□□□□ 0.58
TNFRSF12A-202ENST00000341627 SALL3Q9BXA9 1300 aa18.67■□□□□ 0.58
TNFRSF12A-202ENST00000341627 MYO5AQ9Y4I1 1855 aaKnown RBP18.67■□□□□ 0.58
TNFRSF12A-202ENST00000341627 UNCXA6NJT0 531 aa18.66■□□□□ 0.58
TNFRSF12A-202ENST00000341627 NPM3O75607 178 aaKnown RBP18.66■□□□□ 0.58
TNFRSF12A-202ENST00000341627 WDHD1O75717 1129 aaPredicted RBP18.66■□□□□ 0.58
TNFRSF12A-202ENST00000341627 REM2Q8IYK8 340 aaPredicted RBP18.66■□□□□ 0.58
TNFRSF12A-202ENST00000341627 PI4K2BQ8TCG2 481 aa18.66■□□□□ 0.58
TNFRSF12A-202ENST00000341627 STAP2Q9UGK3 403 aa18.66■□□□□ 0.58
TNFRSF12A-202ENST00000341627 IREB2P48200 963 aaKnown RBP18.65■□□□□ 0.58
TNFRSF12A-202ENST00000341627 PDE1AP54750 535 aa18.65■□□□□ 0.58
TNFRSF12A-202ENST00000341627 MKRN3Q13064 507 aaKnown RBP18.65■□□□□ 0.58
TNFRSF12A-202ENST00000341627 PICALMQ13492 652 aa18.65■□□□□ 0.58
TNFRSF12A-202ENST00000341627 SPRYD7Q5W111 196 aa18.65■□□□□ 0.58
TNFRSF12A-202ENST00000341627 SH3RF3Q8TEJ3 882 aaPredicted RBP18.65■□□□□ 0.58
TNFRSF12A-202ENST00000341627 SLC10A4Q96EP9 437 aa18.65■□□□□ 0.58
TNFRSF12A-202ENST00000341627 SAGE1Q9NXZ1 904 aa18.65■□□□□ 0.58
TNFRSF12A-202ENST00000341627 ZNF532Q9HCE3 1301 aa18.65■□□□□ 0.58
TNFRSF12A-202ENST00000341627 RFX7Q2KHR2 1363 aa18.65■□□□□ 0.58
TNFRSF12A-202ENST00000341627 TRPA1O75762 1119 aa18.64■□□□□ 0.57
TNFRSF12A-202ENST00000341627 LRRFIP1Q32MZ4 808 aaKnown RBP18.64■□□□□ 0.57
TNFRSF12A-202ENST00000341627 DCAF15Q66K64 600 aa18.64■□□□□ 0.57
TNFRSF12A-202ENST00000341627 ZSCAN29Q8IWY8 852 aaPredicted RBP18.64■□□□□ 0.57
TNFRSF12A-202ENST00000341627 KBTBD3Q8NAB2 608 aa18.64■□□□□ 0.57
TNFRSF12A-202ENST00000341627 MIGA1Q8NAN2 632 aa18.64■□□□□ 0.57
TNFRSF12A-202ENST00000341627 MAGEB6P1A0A0J9YX57 407 aa18.63■□□□□ 0.57
TNFRSF12A-202ENST00000341627 ADD2P35612 726 aa18.63■□□□□ 0.57
TNFRSF12A-202ENST00000341627 TM4SF4P48230 202 aa18.63■□□□□ 0.57
TNFRSF12A-202ENST00000341627 UBE3CQ15386 1083 aa18.63■□□□□ 0.57
TNFRSF12A-202ENST00000341627 DDX4Q9NQI0 724 aaKnown RBP18.63■□□□□ 0.57
TNFRSF12A-202ENST00000341627 TCRBV5S4A2TA0A5A2 114 aa18.62■□□□□ 0.57
TNFRSF12A-202ENST00000341627 DYNLL1P63167 89 aaKnown RBP18.62■□□□□ 0.57
TNFRSF12A-202ENST00000341627 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.62■□□□□ 0.57
TNFRSF12A-202ENST00000341627 ZFPM1Q8IX07 1006 aa18.62■□□□□ 0.57
TNFRSF12A-202ENST00000341627 ANKRD13AQ8IZ07 590 aa18.62■□□□□ 0.57
TNFRSF12A-202ENST00000341627 ZFYP08048 801 aaPredicted RBP18.61■□□□□ 0.57
TNFRSF12A-202ENST00000341627 TGFBRAP1Q8WUH2 860 aa18.61■□□□□ 0.57
TNFRSF12A-202ENST00000341627 WNK4Q96J92 1243 aa18.61■□□□□ 0.57
TNFRSF12A-202ENST00000341627 ZNF341Q9BYN7 854 aa18.61■□□□□ 0.57
TNFRSF12A-202ENST00000341627 OSBPL5Q9H0X9 879 aaPredicted RBP18.61■□□□□ 0.57
TNFRSF12A-202ENST00000341627 ATRNL1Q5VV63 1379 aa18.6■□□□□ 0.57
TNFRSF12A-202ENST00000341627 ZBTB48P10074 688 aaPredicted RBP18.6■□□□□ 0.57
TNFRSF12A-202ENST00000341627 GJA5P36382 358 aa18.6■□□□□ 0.57
TNFRSF12A-202ENST00000341627 USP5P45974 858 aa18.6■□□□□ 0.57
TNFRSF12A-202ENST00000341627 MAPKAPK5Q8IW41 473 aa18.6■□□□□ 0.57
TNFRSF12A-202ENST00000341627 PLEKHM2Q8IWE5 1019 aa18.6■□□□□ 0.57
TNFRSF12A-202ENST00000341627 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.6■□□□□ 0.574e-7■■□□□ 14.3
TNFRSF12A-202ENST00000341627 EVI5LQ96CN4 794 aa18.6■□□□□ 0.57
TNFRSF12A-202ENST00000341627 RIOK1Q9BRS2 568 aaKnown RBP18.6■□□□□ 0.57
TNFRSF12A-202ENST00000341627 FSD1Q9BTV5 496 aa18.6■□□□□ 0.57
TNFRSF12A-202ENST00000341627 CRNKL1Q9BZJ0 848 aaKnown RBP18.6■□□□□ 0.57
TNFRSF12A-202ENST00000341627 DHX36Q9H2U1 1008 aaKnown RBP18.6■□□□□ 0.57
TNFRSF12A-202ENST00000341627 OSBPL3Q9H4L5 887 aa18.6■□□□□ 0.57
TNFRSF12A-202ENST00000341627 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.6■□□□□ 0.57
TNFRSF12A-202ENST00000341627 AK9Q5TCS8 1911 aa18.6■□□□□ 0.57
TNFRSF12A-202ENST00000341627 COL2A1P02458 1487 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF12A-202ENST00000341627 FLT1P17948 1338 aa18.59■□□□□ 0.57
TNFRSF12A-202ENST00000341627 DDTLA6NHG4 134 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF12A-202ENST00000341627 RNF113AO15541 343 aaKnown RBP18.59■□□□□ 0.57
TNFRSF12A-202ENST00000341627 MAP3K9P80192 1104 aa18.59■□□□□ 0.57
TNFRSF12A-202ENST00000341627 MIGA2Q7L4E1 593 aa18.59■□□□□ 0.57
TNFRSF12A-202ENST00000341627 SREBF2Q12772 1141 aa18.58■□□□□ 0.56
TNFRSF12A-202ENST00000341627 VGLL4Q14135 290 aa18.58■□□□□ 0.56
TNFRSF12A-202ENST00000341627 CENPQQ7L2Z9 268 aaPredicted RBP18.58■□□□□ 0.56
TNFRSF12A-202ENST00000341627 SH3BP5LQ7L8J4 393 aa18.58■□□□□ 0.56
TNFRSF12A-202ENST00000341627 ELP3Q9H9T3 547 aa18.58■□□□□ 0.56
TNFRSF12A-202ENST00000341627 CSADQ9Y600 493 aa18.58■□□□□ 0.56
TNFRSF12A-202ENST00000341627 MYH7P12883 1935 aa18.58■□□□□ 0.56
TNFRSF12A-202ENST00000341627 MANSC4A6NHS7 340 aaPredicted RBP18.57■□□□□ 0.56
TNFRSF12A-202ENST00000341627 MBD4O95243 580 aa18.57■□□□□ 0.56
TNFRSF12A-202ENST00000341627 SLFNL1Q499Z3 407 aa18.57■□□□□ 0.56
TNFRSF12A-202ENST00000341627 LCORLQ8N3X6 602 aa18.57■□□□□ 0.56
TNFRSF12A-202ENST00000341627 CNKSR2Q8WXI2 1034 aa18.57■□□□□ 0.56
TNFRSF12A-202ENST00000341627 APPBP2Q92624 585 aa18.57■□□□□ 0.56
TNFRSF12A-202ENST00000341627 WRNIP1Q96S55 665 aa18.57■□□□□ 0.56
TNFRSF12A-202ENST00000341627 ARMT1Q9H993 441 aa18.57■□□□□ 0.56
TNFRSF12A-202ENST00000341627 PI4KBQ9UBF8 816 aa18.57■□□□□ 0.56
TNFRSF12A-202ENST00000341627 TRIM6-TRIM34B2RNG4 842 aa18.56■□□□□ 0.56
TNFRSF12A-202ENST00000341627 INHBEP58166 350 aa18.56■□□□□ 0.56
TNFRSF12A-202ENST00000341627 OPTNQ96CV9 577 aa18.56■□□□□ 0.56
TNFRSF12A-202ENST00000341627 CCDC136Q96JN2 1154 aa18.56■□□□□ 0.56
TNFRSF12A-202ENST00000341627 TBC1D12O60347 775 aa18.55■□□□□ 0.56
TNFRSF12A-202ENST00000341627 TBC1D8O95759 1140 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms