RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 PLA2G4DQ86XP0 818 aa23.35■■□□□ 1.33
SPG7-202ENST00000341316 ZNF710Q8N1W2 664 aa23.35■■□□□ 1.33
SPG7-202ENST00000341316 STAG1Q8WVM7 1258 aa23.35■■□□□ 1.33
SPG7-202ENST00000341316 ABCF2Q9UG63 623 aa23.35■■□□□ 1.33
SPG7-202ENST00000341316 ZNF75DP51815 510 aa23.35■■□□□ 1.33
SPG7-202ENST00000341316 STX1AQ16623 288 aa23.35■■□□□ 1.33
SPG7-202ENST00000341316 VPS37DQ86XT2 251 aa23.35■■□□□ 1.33
SPG7-202ENST00000341316 CELF1Q92879 486 aaKnown RBP23.35■■□□□ 1.33
SPG7-202ENST00000341316 CNNM2Q9H8M5 875 aa23.35■■□□□ 1.33
SPG7-202ENST00000341316 SYNE3Q6ZMZ3 975 aa23.34■■□□□ 1.33
SPG7-202ENST00000341316 SDR42E1Q8WUS8 393 aa23.34■■□□□ 1.33
SPG7-202ENST00000341316 NACAP1Q9BZK3 213 aa23.34■■□□□ 1.33
SPG7-202ENST00000341316 BSDC1Q9NW68 430 aaPredicted RBP23.34■■□□□ 1.33
SPG7-202ENST00000341316 MINPP1Q9UNW1 487 aa23.34■■□□□ 1.33
SPG7-202ENST00000341316 SLC12A7Q9Y666 1083 aa23.34■■□□□ 1.33
SPG7-202ENST00000341316 PTGS1P23219 599 aa23.34■■□□□ 1.33
SPG7-202ENST00000341316 IARSP41252 1262 aaKnown RBP23.34■■□□□ 1.33
SPG7-202ENST00000341316 AXDND1Q5T1B0 1012 aaPredicted RBP23.34■■□□□ 1.33
SPG7-202ENST00000341316 C8orf37Q96NL8 207 aa23.34■■□□□ 1.33
SPG7-202ENST00000341316 KRT23Q9C075 422 aa23.34■■□□□ 1.33
SPG7-202ENST00000341316 CPLX2Q6PUV4 134 aaKnown RBP23.33■■□□□ 1.33
SPG7-202ENST00000341316 TRIM5Q9C035 493 aa23.33■■□□□ 1.33
SPG7-202ENST00000341316 TOMM22Q9NS69 142 aa23.33■■□□□ 1.33
SPG7-202ENST00000341316 CHD4Q14839 1912 aa23.33■■□□□ 1.32
SPG7-202ENST00000341316 CCDC69A6NI79 296 aa23.33■■□□□ 1.32
SPG7-202ENST00000341316 CAVIN2O95810 425 aa23.33■■□□□ 1.32
SPG7-202ENST00000341316 RGS22Q8NE09 1264 aa23.33■■□□□ 1.32
SPG7-202ENST00000341316 ECM29Q5VYK3 1845 aa23.32■■□□□ 1.32
SPG7-202ENST00000341316 WDHD1O75717 1129 aaPredicted RBP23.32■■□□□ 1.32
SPG7-202ENST00000341316 UBE4AQ14139 1066 aa23.32■■□□□ 1.32
SPG7-202ENST00000341316 RAI14Q9P0K7 980 aa23.32■■□□□ 1.32
SPG7-202ENST00000341316 SRP68Q9UHB9 627 aaKnown RBP23.32■■□□□ 1.32
SPG7-202ENST00000341316 NRBP1Q9UHY1 535 aa23.32■■□□□ 1.32
SPG7-202ENST00000341316 A0A1B0GUL6 1792 aa23.32■■□□□ 1.32
SPG7-202ENST00000341316 SLC26A6Q9BXS9 759 aa23.31■■□□□ 1.32
SPG7-202ENST00000341316 CNTNAP4Q9C0A0 1308 aa23.31■■□□□ 1.32
SPG7-202ENST00000341316 ZNF831Q5JPB2 1677 aa23.31■■□□□ 1.32
SPG7-202ENST00000341316 KLRK1P26718 216 aa23.31■■□□□ 1.32
SPG7-202ENST00000341316 MARCKSP29966 332 aaPredicted RBP23.31■■□□□ 1.32
SPG7-202ENST00000341316 GUCY1A2P33402 732 aa23.31■■□□□ 1.32
SPG7-202ENST00000341316 PPARAQ07869 468 aa23.31■■□□□ 1.32
SPG7-202ENST00000341316 FAM182BQ5T319 152 aa23.31■■□□□ 1.32
SPG7-202ENST00000341316 ZNF384Q8TF68 577 aa23.31■■□□□ 1.32
SPG7-202ENST00000341316 FAM84BQ96KN1 310 aaPredicted RBP23.31■■□□□ 1.32
SPG7-202ENST00000341316 SDF4Q9BRK5 362 aa23.31■■□□□ 1.32
SPG7-202ENST00000341316 SLC39A14Q15043 492 aa23.3■■□□□ 1.32
SPG7-202ENST00000341316 DHX40Q8IX18 779 aaKnown RBP23.3■■□□□ 1.32
SPG7-202ENST00000341316 MROH7-TTC4A0A0A0MT08 1334 aa23.3■■□□□ 1.32
SPG7-202ENST00000341316 CASZ1Q86V15 1759 aa23.3■■□□□ 1.32
SPG7-202ENST00000341316 MAGEB6P1A0A0J9YX57 407 aa23.3■■□□□ 1.32
SPG7-202ENST00000341316 SLC10A5Q5PT55 438 aa23.3■■□□□ 1.32
SPG7-202ENST00000341316 FBXW7Q969H0 707 aa23.3■■□□□ 1.32
SPG7-202ENST00000341316 RIOK1Q9BRS2 568 aaKnown RBP23.3■■□□□ 1.32
SPG7-202ENST00000341316 CCDC94Q9BW85 323 aaPredicted RBP23.3■■□□□ 1.32
SPG7-202ENST00000341316 GTF2E1P29083 439 aaPredicted RBP23.29■■□□□ 1.32
SPG7-202ENST00000341316 VPS72Q15906 364 aa23.29■■□□□ 1.32
SPG7-202ENST00000341316 CCDC186Q7Z3E2 898 aa23.29■■□□□ 1.32
SPG7-202ENST00000341316 CCDC24Q8N4L8 307 aa23.29■■□□□ 1.32
SPG7-202ENST00000341316 NGLY1Q96IV0 654 aa23.29■■□□□ 1.32
SPG7-202ENST00000341316 GNL3LQ9NVN8 582 aaKnown RBP23.29■■□□□ 1.32
SPG7-202ENST00000341316 NID2Q14112 1375 aa23.29■■□□□ 1.32
SPG7-202ENST00000341316 STK36Q9NRP7 1315 aa23.29■■□□□ 1.32
SPG7-202ENST00000341316 MINDY4BA8MYZ0 360 aa23.29■■□□□ 1.32
SPG7-202ENST00000341316 FMNL1O95466 1100 aaPredicted RBP23.29■■□□□ 1.32
SPG7-202ENST00000341316 U2AF2P26368 475 aaKnown RBP eCLIP23.29■■□□□ 1.321e-8■■■□□ 14.8
SPG7-202ENST00000341316 DYNLL1P63167 89 aaKnown RBP23.29■■□□□ 1.32
SPG7-202ENST00000341316 SSRP1Q08945 709 aaKnown RBP23.29■■□□□ 1.32
SPG7-202ENST00000341316 WTAPQ15007 396 aa23.29■■□□□ 1.32
SPG7-202ENST00000341316 PTPAQ15257 358 aa23.29■■□□□ 1.32
SPG7-202ENST00000341316 CMTR1Q8N1G2 835 aaKnown RBP23.29■■□□□ 1.32
SPG7-202ENST00000341316 MAP3K14Q99558 947 aa23.29■■□□□ 1.32
SPG7-202ENST00000341316 ANO10Q9NW15 660 aa23.29■■□□□ 1.32
SPG7-202ENST00000341316 ZNF202O95125 648 aa23.28■■□□□ 1.32
SPG7-202ENST00000341316 PFKFB1P16118 471 aa23.28■■□□□ 1.32
SPG7-202ENST00000341316 IFNAR1P17181 557 aa23.28■■□□□ 1.32
SPG7-202ENST00000341316 AMIGO3Q86WK7 504 aa23.28■■□□□ 1.32
SPG7-202ENST00000341316 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.28■■□□□ 1.32
SPG7-202ENST00000341316 CACNA1SQ13698 1873 aa23.28■■□□□ 1.32
SPG7-202ENST00000341316 GOLGA6L19H0YKK7 550 aa23.28■■□□□ 1.32
SPG7-202ENST00000341316 CMA1P23946 247 aa23.28■■□□□ 1.32
SPG7-202ENST00000341316 CHAF1AQ13111 956 aaPredicted RBP23.28■■□□□ 1.32
SPG7-202ENST00000341316 CAVIN4Q5BKX8 364 aa23.28■■□□□ 1.32
SPG7-202ENST00000341316 DRC7Q8IY82 874 aa23.28■■□□□ 1.32
SPG7-202ENST00000341316 KIAA1468Q9P260 1216 aa23.28■■□□□ 1.32
SPG7-202ENST00000341316 SCN7AQ01118 1682 aa23.27■■□□□ 1.32
SPG7-202ENST00000341316 RIOK3O14730 519 aaKnown RBP23.27■■□□□ 1.32
SPG7-202ENST00000341316 CCDC82Q8N4S0 544 aa23.27■■□□□ 1.32
SPG7-202ENST00000341316 NARFQ9UHQ1 456 aa23.27■■□□□ 1.32
SPG7-202ENST00000341316 CYP2D7A0A087X1C5 515 aa23.26■■□□□ 1.31
SPG7-202ENST00000341316 TOM1O60784 492 aa23.26■■□□□ 1.31
SPG7-202ENST00000341316 LRMPQ12912 555 aa23.26■■□□□ 1.31
SPG7-202ENST00000341316 GNL2Q13823 731 aaKnown RBP23.26■■□□□ 1.31
SPG7-202ENST00000341316 RTN1Q16799 776 aa23.26■■□□□ 1.31
SPG7-202ENST00000341316 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.26■■□□□ 1.31
SPG7-202ENST00000341316 NBPF11Q86T75 865 aa23.26■■□□□ 1.31
SPG7-202ENST00000341316 TRIM29Q14134 588 aa23.26■■□□□ 1.31
SPG7-202ENST00000341316 SART3Q15020 963 aaKnown RBP23.26■■□□□ 1.31
SPG7-202ENST00000341316 SARM1Q6SZW1 724 aa23.26■■□□□ 1.31
SPG7-202ENST00000341316 RNF41Q9H4P4 317 aaPredicted RBP23.26■■□□□ 1.31
SPG7-202ENST00000341316 ANAPC4Q9UJX5 808 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms