RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 RNF186Q9NXI6 227 aa27.38■■□□□ 1.97
PBX1-201ENST00000340699 AATFQ9NY61 560 aaKnown RBP eCLIP27.38■■□□□ 1.97
PBX1-201ENST00000340699 MYO5AQ9Y4I1 1855 aaKnown RBP27.38■■□□□ 1.97
PBX1-201ENST00000340699 RFX7Q2KHR2 1363 aa27.37■■□□□ 1.97
PBX1-201ENST00000340699 MANSC4A6NHS7 340 aaPredicted RBP27.37■■□□□ 1.97
PBX1-201ENST00000340699 NPM3O75607 178 aaKnown RBP27.37■■□□□ 1.97
PBX1-201ENST00000340699 TRPA1O75762 1119 aa27.37■■□□□ 1.97
PBX1-201ENST00000340699 TM4SF4P48230 202 aa27.37■■□□□ 1.97
PBX1-201ENST00000340699 VGLL4Q14135 290 aa27.37■■□□□ 1.97
PBX1-201ENST00000340699 TMED8Q6PL24 325 aaPredicted RBP27.37■■□□□ 1.97
PBX1-201ENST00000340699 DDX4Q9NQI0 724 aaKnown RBP27.37■■□□□ 1.97
PBX1-201ENST00000340699 ATP5JP18859 108 aa27.36■■□□□ 1.97
PBX1-201ENST00000340699 INHBEP58166 350 aa27.36■■□□□ 1.97
PBX1-201ENST00000340699 PPP4CP60510 307 aa27.36■■□□□ 1.97
PBX1-201ENST00000340699 MAGEB6Q8N7X4 407 aa27.36■■□□□ 1.97
PBX1-201ENST00000340699 SH3RF3Q8TEJ3 882 aaPredicted RBP27.36■■□□□ 1.97
PBX1-201ENST00000340699 OPTNQ96CV9 577 aa27.36■■□□□ 1.97
PBX1-201ENST00000340699 OTOFQ9HC10 1997 aa27.35■■□□□ 1.97
PBX1-201ENST00000340699 BOLA2Q9H3K6 86 aa27.35■■□□□ 1.97
PBX1-201ENST00000340699 GOLIM4O00461 696 aa27.34■■□□□ 1.97
PBX1-201ENST00000340699 ADGRA1Q86SQ6 560 aa27.34■■□□□ 1.97
PBX1-201ENST00000340699 ZKSCAN4Q969J2 545 aaPredicted RBP27.34■■□□□ 1.97
PBX1-201ENST00000340699 SUPT16HQ9Y5B9 1047 aaKnown RBP27.34■■□□□ 1.97
PBX1-201ENST00000340699 DDTLA6NHG4 134 aaPredicted RBP27.33■■□□□ 1.97
PBX1-201ENST00000340699 SH3BP5LQ7L8J4 393 aa27.33■■□□□ 1.97
PBX1-201ENST00000340699 CERS3Q8IU89 383 aa27.33■■□□□ 1.97
PBX1-201ENST00000340699 GPATCH3Q96I76 525 aa27.33■■□□□ 1.97
PBX1-201ENST00000340699 ZBTB47Q9UFB7 747 aaPredicted RBP27.33■■□□□ 1.97
PBX1-201ENST00000340699 OSBPL5Q9H0X9 879 aaPredicted RBP27.32■■□□□ 1.96
PBX1-201ENST00000340699 PAG1Q9NWQ8 432 aa27.32■■□□□ 1.96
PBX1-201ENST00000340699 ZNF112Q9UJU3 913 aa27.32■■□□□ 1.96
PBX1-201ENST00000340699 DOCK2Q92608 1830 aa27.32■■□□□ 1.96
PBX1-201ENST00000340699 GJA5P36382 358 aa27.31■■□□□ 1.96
PBX1-201ENST00000340699 ERO1BQ86YB8 467 aa27.31■■□□□ 1.96
PBX1-201ENST00000340699 OTUD5Q96G74 571 aa27.31■■□□□ 1.96
PBX1-201ENST00000340699 HAUS7Q99871 368 aa27.31■■□□□ 1.96
PBX1-201ENST00000340699 ECHDC1Q9NTX5 307 aa27.31■■□□□ 1.96
PBX1-201ENST00000340699 SNCAIPQ9Y6H5 919 aa27.31■■□□□ 1.96
PBX1-201ENST00000340699 INPP5BP32019 993 aa27.3■■□□□ 1.96
PBX1-201ENST00000340699 SLC9C2Q5TAH2 1124 aa27.3■■□□□ 1.96
PBX1-201ENST00000340699 TNS4Q8IZW8 715 aa27.3■■□□□ 1.96
PBX1-201ENST00000340699 MIGA1Q8NAN2 632 aa27.3■■□□□ 1.96
PBX1-201ENST00000340699 TGFBRAP1Q8WUH2 860 aa27.3■■□□□ 1.96
PBX1-201ENST00000340699 SPDYE5A6NIY4 337 aa27.29■■□□□ 1.96
PBX1-201ENST00000340699 ALDH1A1P00352 501 aa27.29■■□□□ 1.96
PBX1-201ENST00000340699 DYNLL1P63167 89 aaKnown RBP27.29■■□□□ 1.96
PBX1-201ENST00000340699 OTUD7BQ6GQQ9 843 aa27.29■■□□□ 1.96
PBX1-201ENST00000340699 CNKSR2Q8WXI2 1034 aa27.29■■□□□ 1.96
PBX1-201ENST00000340699 ATRNL1Q5VV63 1379 aa27.29■■□□□ 1.96
PBX1-201ENST00000340699 GTF2A2P52657 109 aa27.28■■□□□ 1.96
PBX1-201ENST00000340699 HDAC1Q13547 482 aaPredicted RBP27.28■■□□□ 1.96
PBX1-201ENST00000340699 MAPKAPK5Q8IW41 473 aa27.28■■□□□ 1.96
PBX1-201ENST00000340699 GCC1Q96CN9 775 aa27.28■■□□□ 1.96
PBX1-201ENST00000340699 EDC3Q96F86 508 aaKnown RBP27.28■■□□□ 1.96
PBX1-201ENST00000340699 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.28■■□□□ 1.96
PBX1-201ENST00000340699 DHX36Q9H2U1 1008 aaKnown RBP27.28■■□□□ 1.96
PBX1-201ENST00000340699 COL2A1P02458 1487 aaPredicted RBP27.27■■□□□ 1.96
PBX1-201ENST00000340699 PDE6AP16499 860 aa27.27■■□□□ 1.96
PBX1-201ENST00000340699 MAP3K10Q02779 954 aa27.27■■□□□ 1.96
PBX1-201ENST00000340699 IFNL1Q8IU54 200 aa27.27■■□□□ 1.96
PBX1-201ENST00000340699 EXOC6Q8TAG9 804 aa27.27■■□□□ 1.96
PBX1-201ENST00000340699 TBC1D12O60347 775 aa27.26■■□□□ 1.95
PBX1-201ENST00000340699 USP5P45974 858 aa27.26■■□□□ 1.95
PBX1-201ENST00000340699 PPATQ06203 517 aa27.26■■□□□ 1.95
PBX1-201ENST00000340699 NOL9Q5SY16 702 aaKnown RBP27.26■■□□□ 1.95
PBX1-201ENST00000340699 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.26■■□□□ 1.95
PBX1-201ENST00000340699 FLT1P17948 1338 aa27.25■■□□□ 1.95
PBX1-201ENST00000340699 ZNF532Q9HCE3 1301 aa27.25■■□□□ 1.95
PBX1-201ENST00000340699 MAGEB6P1A0A0J9YX57 407 aa27.25■■□□□ 1.95
PBX1-201ENST00000340699 PHF20L1A8MW92 1017 aa27.25■■□□□ 1.95
PBX1-201ENST00000340699 TBC1D8O95759 1140 aa27.25■■□□□ 1.95
PBX1-201ENST00000340699 PPIL2Q13356 520 aa27.25■■□□□ 1.95
PBX1-201ENST00000340699 RWDD1Q9H446 243 aaPredicted RBP27.25■■□□□ 1.95
PBX1-201ENST00000340699 PI4KBQ9UBF8 816 aa27.25■■□□□ 1.95
PBX1-201ENST00000340699 TESPA1A2RU30 521 aaPredicted RBP27.24■■□□□ 1.95
PBX1-201ENST00000340699 ANKRD45Q5TZF3 282 aa27.24■■□□□ 1.95
PBX1-201ENST00000340699 MS4A4AQ96JQ5 239 aa27.24■■□□□ 1.95
PBX1-201ENST00000340699 PICK1Q9NRD5 415 aa27.24■■□□□ 1.95
PBX1-201ENST00000340699 LAMB1P07942 1786 aa27.24■■□□□ 1.95
PBX1-201ENST00000340699 CCL15-CCL14A0A0B4J2E2 113 aa27.23■■□□□ 1.95
PBX1-201ENST00000340699 CTNND1O60716 968 aaKnown RBP27.23■■□□□ 1.95
PBX1-201ENST00000340699 CCL15Q16663 113 aa27.23■■□□□ 1.95
PBX1-201ENST00000340699 ZSCAN25Q6NSZ9 544 aa27.23■■□□□ 1.95
PBX1-201ENST00000340699 SCYL3Q8IZE3 742 aa27.23■■□□□ 1.95
PBX1-201ENST00000340699 TTC41PQ6P2S7 1318 aa27.22■■□□□ 1.95
PBX1-201ENST00000340699 CDK5RAP2Q96SN8 1893 aa27.22■■□□□ 1.95
PBX1-201ENST00000340699 IGF2BP3O00425 579 aaKnown RBP eCLIP27.22■■□□□ 1.95
PBX1-201ENST00000340699 IRF6O14896 467 aa27.22■■□□□ 1.95
PBX1-201ENST00000340699 ERC2O15083 957 aa27.22■■□□□ 1.95
PBX1-201ENST00000340699 CETPP11597 493 aa27.22■■□□□ 1.95
PBX1-201ENST00000340699 SNAPC2Q13487 334 aa27.22■■□□□ 1.95
PBX1-201ENST00000340699 TRIM34Q9BYJ4 488 aa27.22■■□□□ 1.95
PBX1-201ENST00000340699 HERC5Q9UII4 1024 aaKnown RBP27.22■■□□□ 1.95
PBX1-201ENST00000340699 FOCADQ5VW36 1801 aa27.21■■□□□ 1.95
PBX1-201ENST00000340699 CASP8AP2Q9UKL3 1982 aa27.21■■□□□ 1.95
PBX1-201ENST00000340699 HLA-DOAP06340 250 aa27.21■■□□□ 1.95
PBX1-201ENST00000340699 SLURP2P0DP57 97 aa27.21■■□□□ 1.95
PBX1-201ENST00000340699 ADD2P35612 726 aa27.21■■□□□ 1.95
PBX1-201ENST00000340699 FOXP4Q8IVH2 680 aaPredicted RBP27.21■■□□□ 1.95
PBX1-201ENST00000340699 RIOK1Q9BRS2 568 aaKnown RBP27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms