RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 IRX3P78415 501 aaPredicted RBP16.73■□□□□ 0.27
RRP1B-201ENST00000340648 TMTC1Q8IUR5 882 aa16.73■□□□□ 0.27
RRP1B-201ENST00000340648 PROSER3Q2NL68 480 aa16.73■□□□□ 0.27
RRP1B-201ENST00000340648 CLIC6Q96NY7 704 aa16.73■□□□□ 0.27
RRP1B-201ENST00000340648 CALM1P0DP23 149 aa16.73■□□□□ 0.27
RRP1B-201ENST00000340648 CALM2P0DP24 149 aa16.73■□□□□ 0.27
RRP1B-201ENST00000340648 CALM3P0DP25 149 aa16.73■□□□□ 0.27
RRP1B-201ENST00000340648 DTHD1Q6ZMT9 781 aa16.73■□□□□ 0.27
RRP1B-201ENST00000340648 NSUN7Q8NE18 718 aaKnown RBP16.73■□□□□ 0.27
RRP1B-201ENST00000340648 ZNF496Q96IT1 587 aaPredicted RBP16.73■□□□□ 0.27
RRP1B-201ENST00000340648 ADD1P35611 737 aaKnown RBP16.73■□□□□ 0.27
RRP1B-201ENST00000340648 CTDSPL2Q05D32 466 aa16.73■□□□□ 0.27
RRP1B-201ENST00000340648 TBC1D8BQ0IIM8 1120 aa16.73■□□□□ 0.27
RRP1B-201ENST00000340648 BICDL2A1A5D9 508 aa16.72■□□□□ 0.27
RRP1B-201ENST00000340648 CALML3P27482 149 aa16.72■□□□□ 0.27
RRP1B-201ENST00000340648 CFAP58Q5T655 872 aa16.72■□□□□ 0.27
RRP1B-201ENST00000340648 TSPY3P0CV98 308 aa16.72■□□□□ 0.27
RRP1B-201ENST00000340648 TSPY8P0CW00 308 aa16.72■□□□□ 0.27
RRP1B-201ENST00000340648 RBM6P78332 1123 aaKnown RBP16.72■□□□□ 0.27
RRP1B-201ENST00000340648 TRIM14Q14142 442 aa16.72■□□□□ 0.27
RRP1B-201ENST00000340648 CLTCL1P53675 1640 aa16.72■□□□□ 0.27
RRP1B-201ENST00000340648 GOLGA6CA6NDK9 693 aa16.72■□□□□ 0.27
RRP1B-201ENST00000340648 GOLGA6DP0CG33 693 aa16.72■□□□□ 0.27
RRP1B-201ENST00000340648 FBXO38Q6PIJ6 1188 aa16.72■□□□□ 0.27
RRP1B-201ENST00000340648 JAKMIP2Q96AA8 810 aa16.72■□□□□ 0.27
RRP1B-201ENST00000340648 HAUS7Q99871 368 aa16.72■□□□□ 0.27
RRP1B-201ENST00000340648 GOLGA6AQ9NYA3 693 aa16.72■□□□□ 0.27
RRP1B-201ENST00000340648 DBNLQ9UJU6 430 aaKnown RBP16.72■□□□□ 0.27
RRP1B-201ENST00000340648 V9GY48 417 aaPredicted RBP16.72■□□□□ 0.27
RRP1B-201ENST00000340648 POLR1AO95602 1720 aaPredicted RBP16.72■□□□□ 0.27
RRP1B-201ENST00000340648 NAPAP54920 295 aa16.72■□□□□ 0.27
RRP1B-201ENST00000340648 PAK1Q13153 545 aa16.72■□□□□ 0.27
RRP1B-201ENST00000340648 NAA30Q147X3 362 aaPredicted RBP16.72■□□□□ 0.27
RRP1B-201ENST00000340648 BRD3Q15059 726 aa16.72■□□□□ 0.27
RRP1B-201ENST00000340648 IFI16Q16666 785 aaKnown RBP16.72■□□□□ 0.27
RRP1B-201ENST00000340648 CTNNBL1Q8WYA6 563 aaPredicted RBP16.72■□□□□ 0.27
RRP1B-201ENST00000340648 ATP7BP35670 1465 aa16.72■□□□□ 0.27
RRP1B-201ENST00000340648 NECTIN1Q15223 517 aa16.71■□□□□ 0.27
RRP1B-201ENST00000340648 ZRSR2Q15696 482 aaKnown RBP16.71■□□□□ 0.27
RRP1B-201ENST00000340648 GPIHBP1Q8IV16 184 aa16.71■□□□□ 0.27
RRP1B-201ENST00000340648 NF2P35240 595 aa16.71■□□□□ 0.27
RRP1B-201ENST00000340648 PIK3AP1Q6ZUJ8 805 aa16.71■□□□□ 0.27
RRP1B-201ENST00000340648 SLC52A2Q9HAB3 445 aa16.71■□□□□ 0.27
RRP1B-201ENST00000340648 KIF1BO60333 1816 aa16.71■□□□□ 0.27
RRP1B-201ENST00000340648 ADCY10Q96PN6 1610 aa16.71■□□□□ 0.27
RRP1B-201ENST00000340648 GBP2P32456 591 aaPredicted RBP16.71■□□□□ 0.27
RRP1B-201ENST00000340648 CCDC121Q6ZUS5 278 aa16.71■□□□□ 0.27
RRP1B-201ENST00000340648 CEP57Q86XR8 500 aa16.71■□□□□ 0.27
RRP1B-201ENST00000340648 RTEL1Q9NZ71 1219 aa16.71■□□□□ 0.27
RRP1B-201ENST00000340648 MAP3K4Q9Y6R4 1608 aa16.71■□□□□ 0.27
RRP1B-201ENST00000340648 RESTQ13127 1097 aa16.71■□□□□ 0.27
RRP1B-201ENST00000340648 GOLGA6L10A0A0M3HER8 536 aa16.7■□□□□ 0.26
RRP1B-201ENST00000340648 hCG_1642624A0A1W2PR95 340 aa16.7■□□□□ 0.26
RRP1B-201ENST00000340648 NUTM2BA6NNL0 878 aaPredicted RBP16.7■□□□□ 0.26
RRP1B-201ENST00000340648 NUTM2EB1AL46 878 aaPredicted RBP16.7■□□□□ 0.26
RRP1B-201ENST00000340648 NOC4LQ9BVI4 516 aaKnown RBP16.7■□□□□ 0.26
RRP1B-201ENST00000340648 LRRC27Q9C0I9 530 aa16.7■□□□□ 0.26
RRP1B-201ENST00000340648 A0A1W2PQ27 194 aa16.7■□□□□ 0.26
RRP1B-201ENST00000340648 A0A1W2PQ64 194 aa16.7■□□□□ 0.26
RRP1B-201ENST00000340648 A0A1W2PQD8 194 aa16.7■□□□□ 0.26
RRP1B-201ENST00000340648 ITGA6P23229 1130 aa16.7■□□□□ 0.26
RRP1B-201ENST00000340648 BLZF1Q9H2G9 400 aa16.7■□□□□ 0.26
RRP1B-201ENST00000340648 RCOR1Q9UKL0 485 aa16.7■□□□□ 0.26
RRP1B-201ENST00000340648 A1BGP04217 495 aa16.7■□□□□ 0.26
RRP1B-201ENST00000340648 PSMB7Q99436 277 aa16.7■□□□□ 0.26
RRP1B-201ENST00000340648 SELENOOQ9BVL4 669 aa16.7■□□□□ 0.26
RRP1B-201ENST00000340648 TAOK3Q9H2K8 898 aa16.7■□□□□ 0.26
RRP1B-201ENST00000340648 MADDQ8WXG6 1647 aa16.7■□□□□ 0.26
RRP1B-201ENST00000340648 NDUFAB1O14561 156 aa16.7■□□□□ 0.26
RRP1B-201ENST00000340648 FBXO18Q8NFZ0 1043 aa16.7■□□□□ 0.26
RRP1B-201ENST00000340648 SHROOM2Q13796 1616 aa16.7■□□□□ 0.26
RRP1B-201ENST00000340648 CPSF1Q10570 1443 aaKnown RBP16.69■□□□□ 0.26
RRP1B-201ENST00000340648 KIAA0753Q2KHM9 967 aa16.69■□□□□ 0.26
RRP1B-201ENST00000340648 FBXO3Q9UK99 471 aa16.69■□□□□ 0.26
RRP1B-201ENST00000340648 WWC3Q9ULE0 1092 aa16.69■□□□□ 0.26
RRP1B-201ENST00000340648 PRDM1O75626 825 aa16.69■□□□□ 0.26
RRP1B-201ENST00000340648 GNAQP50148 359 aa16.69■□□□□ 0.26
RRP1B-201ENST00000340648 TMEM132AQ24JP5 1023 aa16.69■□□□□ 0.26
RRP1B-201ENST00000340648 TTC38Q5R3I4 469 aa16.69■□□□□ 0.26
RRP1B-201ENST00000340648 CRACR2BQ8N4Y2 399 aaPredicted RBP16.69■□□□□ 0.26
RRP1B-201ENST00000340648 CDK12Q9NYV4 1490 aaPredicted RBP16.69■□□□□ 0.26
RRP1B-201ENST00000340648 GOLGA6BA6NDN3 693 aa16.69■□□□□ 0.26
RRP1B-201ENST00000340648 CLCN6P51797 869 aa16.69■□□□□ 0.26
RRP1B-201ENST00000340648 POLA2Q14181 598 aa16.69■□□□□ 0.26
RRP1B-201ENST00000340648 TSGA10Q9BZW7 698 aa16.69■□□□□ 0.26
RRP1B-201ENST00000340648 BAG3O95817 575 aa16.68■□□□□ 0.26
RRP1B-201ENST00000340648 CMTR1Q8N1G2 835 aaKnown RBP16.68■□□□□ 0.26
RRP1B-201ENST00000340648 ZNF532Q9HCE3 1301 aa16.68■□□□□ 0.26
RRP1B-201ENST00000340648 CARMIL3Q8ND23 1372 aa16.68■□□□□ 0.26
RRP1B-201ENST00000340648 PPARDQ03181 441 aa16.68■□□□□ 0.26
RRP1B-201ENST00000340648 CSGALNACT2Q8N6G5 542 aa16.68■□□□□ 0.26
RRP1B-201ENST00000340648 CCDC114Q96M63 670 aa16.68■□□□□ 0.26
RRP1B-201ENST00000340648 TBX22Q9Y458 520 aa16.68■□□□□ 0.26
RRP1B-201ENST00000340648 CROCC2H7BZ55 1655 aa16.68■□□□□ 0.26
RRP1B-201ENST00000340648 C8orf74Q6P047 294 aa16.68■□□□□ 0.26
RRP1B-201ENST00000340648 ANKRD18AQ8IVF6 992 aa16.68■□□□□ 0.26
RRP1B-201ENST00000340648 RBM28Q9NW13 759 aaKnown RBP16.68■□□□□ 0.26
RRP1B-201ENST00000340648 HPDP32754 393 aaPredicted RBP16.68■□□□□ 0.26
RRP1B-201ENST00000340648 DDIT3P35638 169 aa16.68■□□□□ 0.26
RRP1B-201ENST00000340648 RNASE9P60153 205 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms