RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 ZBTB22O15209 634 aa16.52■□□□□ 0.24
CPSF7-201ENST00000340437 SLFN14P0C7P3 912 aa16.52■□□□□ 0.24
CPSF7-201ENST00000340437 USP49Q70CQ1 688 aa16.52■□□□□ 0.24
CPSF7-201ENST00000340437 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.52■□□□□ 0.24
CPSF7-201ENST00000340437 CABP5Q9NP86 173 aa16.52■□□□□ 0.24
CPSF7-201ENST00000340437 C5P01031 1676 aa16.52■□□□□ 0.24
CPSF7-201ENST00000340437 KRBA2Q6ZNG9 492 aa16.52■□□□□ 0.24
CPSF7-201ENST00000340437 DHX58Q96C10 678 aa16.52■□□□□ 0.24
CPSF7-201ENST00000340437 NOL10Q9BSC4 688 aaKnown RBP16.52■□□□□ 0.24
CPSF7-201ENST00000340437 IRX2Q9BZI1 471 aaPredicted RBP16.52■□□□□ 0.24
CPSF7-201ENST00000340437 SAMSN1Q9NSI8 373 aaKnown RBP16.52■□□□□ 0.24
CPSF7-201ENST00000340437 C1orf167Q5SNV9 1468 aa16.52■□□□□ 0.23
CPSF7-201ENST00000340437 CASQ1P31415 396 aa16.52■□□□□ 0.23
CPSF7-201ENST00000340437 BMS1Q14692 1282 aaKnown RBP16.52■□□□□ 0.23
CPSF7-201ENST00000340437 TERF2Q15554 542 aa16.52■□□□□ 0.23
CPSF7-201ENST00000340437 EVCP57679 992 aa16.51■□□□□ 0.23
CPSF7-201ENST00000340437 KRI1Q8N9T8 703 aaKnown RBP16.51■□□□□ 0.23
CPSF7-201ENST00000340437 BAG1Q99933 345 aaPredicted RBP16.51■□□□□ 0.23
CPSF7-201ENST00000340437 FER1L4A9Z1Z3 1794 aa16.51■□□□□ 0.23
CPSF7-201ENST00000340437 PCDH11XQ9BZA7 1347 aa16.51■□□□□ 0.23
CPSF7-201ENST00000340437 PCDH11YQ9BZA8 1340 aa16.51■□□□□ 0.23
CPSF7-201ENST00000340437 BICDL1Q6ZP65 573 aa16.51■□□□□ 0.23
CPSF7-201ENST00000340437 SMYD4Q8IYR2 804 aaPredicted RBP16.51■□□□□ 0.23
CPSF7-201ENST00000340437 ZCCHC17Q9NP64 241 aaKnown RBP16.51■□□□□ 0.23
CPSF7-201ENST00000340437 PCDHB6Q9Y5E3 794 aa16.51■□□□□ 0.23
CPSF7-201ENST00000340437 ERICH2A1L162 156 aa16.51■□□□□ 0.23
CPSF7-201ENST00000340437 GTF2E1P29083 439 aaPredicted RBP16.51■□□□□ 0.23
CPSF7-201ENST00000340437 MTF1Q14872 753 aa16.51■□□□□ 0.23
CPSF7-201ENST00000340437 MFSD6Q6ZSS7 791 aa16.51■□□□□ 0.23
CPSF7-201ENST00000340437 TOGARAM2Q6ZUX3 1019 aa16.51■□□□□ 0.23
CPSF7-201ENST00000340437 TRIM22Q8IYM9 498 aa16.51■□□□□ 0.23
CPSF7-201ENST00000340437 CHD2O14647 1828 aaKnown RBP16.51■□□□□ 0.23
CPSF7-201ENST00000340437 UBN2Q6ZU65 1347 aa16.51■□□□□ 0.23
CPSF7-201ENST00000340437 PSDA5PKW4 1024 aaPredicted RBP16.5■□□□□ 0.23
CPSF7-201ENST00000340437 PES1O00541 588 aaKnown RBP16.5■□□□□ 0.23
CPSF7-201ENST00000340437 PRDM1O75626 825 aa16.5■□□□□ 0.23
CPSF7-201ENST00000340437 IL2RBP14784 551 aa16.5■□□□□ 0.23
CPSF7-201ENST00000340437 FMR1Q06787 632 aaKnown RBP eCLIP16.5■□□□□ 0.23
CPSF7-201ENST00000340437 TTLL11Q8NHH1 800 aa16.5■□□□□ 0.23
CPSF7-201ENST00000340437 OXER1Q8TDS5 423 aa16.5■□□□□ 0.23
CPSF7-201ENST00000340437 SMARCE1Q969G3 411 aa16.5■□□□□ 0.23
CPSF7-201ENST00000340437 WDR24Q96S15 920 aa16.5■□□□□ 0.23
CPSF7-201ENST00000340437 HSD3B7Q9H2F3 369 aa16.5■□□□□ 0.23
CPSF7-201ENST00000340437 ARGLU1Q9NWB6 273 aaPredicted RBP16.5■□□□□ 0.23
CPSF7-201ENST00000340437 PPP2R2CQ9Y2T4 447 aa16.5■□□□□ 0.23
CPSF7-201ENST00000340437 SMIM22K7EJ46 135 aa16.5■□□□□ 0.23
CPSF7-201ENST00000340437 SLC4A4Q9Y6R1 1079 aa16.5■□□□□ 0.23
CPSF7-201ENST00000340437 BMP6P22004 513 aa16.5■□□□□ 0.23
CPSF7-201ENST00000340437 AKAP17AQ02040 695 aaKnown RBP16.5■□□□□ 0.23
CPSF7-201ENST00000340437 IFNL3Q8IZI9 196 aa16.5■□□□□ 0.23
CPSF7-201ENST00000340437 ZBTB38Q8NAP3 1195 aaPredicted RBP16.5■□□□□ 0.23
CPSF7-201ENST00000340437 CCDC12Q8WUD4 166 aaPredicted RBP16.5■□□□□ 0.23
CPSF7-201ENST00000340437 ISCA1Q9BUE6 129 aa16.5■□□□□ 0.23
CPSF7-201ENST00000340437 LRP2BPQ9P2M1 347 aa16.5■□□□□ 0.23
CPSF7-201ENST00000340437 PUF60Q9UHX1 559 aaKnown RBP16.5■□□□□ 0.23
CPSF7-201ENST00000340437 AFDNP55196 1824 aaKnown RBP16.5■□□□□ 0.23
CPSF7-201ENST00000340437 TMEM94Q12767 1356 aa16.49■□□□□ 0.23
CPSF7-201ENST00000340437 FAM205CA6NFA0 338 aa16.49■□□□□ 0.23
CPSF7-201ENST00000340437 GABPB1Q06547 395 aaPredicted RBP16.49■□□□□ 0.23
CPSF7-201ENST00000340437 PTPAQ15257 358 aa16.49■□□□□ 0.23
CPSF7-201ENST00000340437 ZFP91Q96JP5 570 aaPredicted RBP16.49■□□□□ 0.23
CPSF7-201ENST00000340437 POSTNQ15063 836 aa16.49■□□□□ 0.23
CPSF7-201ENST00000340437 RTN1Q16799 776 aa16.49■□□□□ 0.23
CPSF7-201ENST00000340437 VSTM4Q8IW00 320 aa16.49■□□□□ 0.23
CPSF7-201ENST00000340437 MPHOSPH8Q99549 860 aa16.49■□□□□ 0.23
CPSF7-201ENST00000340437 ZSCAN12O43309 604 aa16.49■□□□□ 0.23
CPSF7-201ENST00000340437 WTAPQ15007 396 aa16.49■□□□□ 0.23
CPSF7-201ENST00000340437 NOSTRINQ8IVI9 506 aa16.49■□□□□ 0.23
CPSF7-201ENST00000340437 LY9Q9HBG7 655 aa16.49■□□□□ 0.23
CPSF7-201ENST00000340437 MAN1B1Q9UKM7 699 aa16.49■□□□□ 0.23
CPSF7-201ENST00000340437 RIPOR2Q9Y4F9 1068 aa16.49■□□□□ 0.23
CPSF7-201ENST00000340437 IKBKBO14920 756 aa16.48■□□□□ 0.23
CPSF7-201ENST00000340437 CUTAO60888 179 aa16.48■□□□□ 0.23
CPSF7-201ENST00000340437 STARD3NLO95772 234 aa16.48■□□□□ 0.23
CPSF7-201ENST00000340437 PCCAP05165 728 aaPredicted RBP16.48■□□□□ 0.23
CPSF7-201ENST00000340437 GYS2P54840 703 aa16.48■□□□□ 0.23
CPSF7-201ENST00000340437 RESP18Q5W5W9 173 aa16.48■□□□□ 0.23
CPSF7-201ENST00000340437 IGDCC4Q8TDY8 1250 aa16.48■□□□□ 0.23
CPSF7-201ENST00000340437 BPIFA3Q9BQP9 254 aa16.48■□□□□ 0.23
CPSF7-201ENST00000340437 HOOK1Q9UJC3 728 aaKnown RBP16.48■□□□□ 0.23
CPSF7-201ENST00000340437 ACSBG1Q96GR2 724 aa16.48■□□□□ 0.23
CPSF7-201ENST00000340437 MRC1P22897 1456 aa16.48■□□□□ 0.23
CPSF7-201ENST00000340437 BCAMP50895 628 aa16.48■□□□□ 0.23
CPSF7-201ENST00000340437 SDR42E1Q8WUS8 393 aa16.48■□□□□ 0.23
CPSF7-201ENST00000340437 SEC31BQ9NQW1 1179 aa16.48■□□□□ 0.23
CPSF7-201ENST00000340437 VPS54Q9P1Q0 977 aa16.48■□□□□ 0.23
CPSF7-201ENST00000340437 PNMA6AP0CW24 399 aaPredicted RBP16.47■□□□□ 0.23
CPSF7-201ENST00000340437 MAP3K12Q12852 859 aa16.47■□□□□ 0.23
CPSF7-201ENST00000340437 TTF1Q15361 905 aaPredicted RBP16.47■□□□□ 0.23
CPSF7-201ENST00000340437 STRBPQ96SI9 672 aaKnown RBP16.47■□□□□ 0.23
CPSF7-201ENST00000340437 MAP3K14Q99558 947 aa16.47■□□□□ 0.23
CPSF7-201ENST00000340437 ERVV-2B6SEH9 535 aa16.47■□□□□ 0.23
CPSF7-201ENST00000340437 FANCGO15287 622 aa16.47■□□□□ 0.23
CPSF7-201ENST00000340437 CTSWP56202 376 aa16.47■□□□□ 0.23
CPSF7-201ENST00000340437 UBAC1Q9BSL1 405 aa16.47■□□□□ 0.23
CPSF7-201ENST00000340437 ATG3Q9NT62 314 aa16.47■□□□□ 0.23
CPSF7-201ENST00000340437 TUBE1Q9UJT0 475 aa16.47■□□□□ 0.23
CPSF7-201ENST00000340437 A0A0U1RQJ8 604 aa16.47■□□□□ 0.23
CPSF7-201ENST00000340437 CCP110O43303 1012 aa16.47■□□□□ 0.23
CPSF7-201ENST00000340437 PPP6R2O75170 966 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms