RNA–Protein interactions for RNA: ENST00000339711.8

PRDM8-201, Transcript of PR/SET domain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM8, Length 4,095 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-201ENST00000339711 CALM3P0DP25 149 aa18.95■□□□□ 0.62
PRDM8-201ENST00000339711 KRT27Q7Z3Y8 459 aa18.95■□□□□ 0.62
PRDM8-201ENST00000339711 CNNM3Q8NE01 707 aa18.95■□□□□ 0.62
PRDM8-201ENST00000339711 GPS2Q13227 327 aa18.95■□□□□ 0.62
PRDM8-201ENST00000339711 SYKP43405 635 aa18.95■□□□□ 0.62
PRDM8-201ENST00000339711 STX1AQ16623 288 aa18.95■□□□□ 0.62
PRDM8-201ENST00000339711 STOX1Q6ZVD7 989 aa18.95■□□□□ 0.62
PRDM8-201ENST00000339711 SEC63Q9UGP8 760 aaKnown RBP18.95■□□□□ 0.62
PRDM8-201ENST00000339711 PLCG2P16885 1265 aa18.94■□□□□ 0.62
PRDM8-201ENST00000339711 KLHL10Q6JEL2 608 aa18.94■□□□□ 0.62
PRDM8-201ENST00000339711 SPDYE4A6NLX3 237 aa18.94■□□□□ 0.62
PRDM8-201ENST00000339711 NTSR2O95665 410 aa18.94■□□□□ 0.62
PRDM8-201ENST00000339711 PICALMQ13492 652 aa18.94■□□□□ 0.62
PRDM8-201ENST00000339711 HSP90AA4PQ58FG1 418 aa18.94■□□□□ 0.62
PRDM8-201ENST00000339711 VAT1LQ9HCJ6 419 aa18.94■□□□□ 0.62
PRDM8-201ENST00000339711 ABCC12Q96J65 1359 aa18.93■□□□□ 0.62
PRDM8-201ENST00000339711 SERPINB2P05120 415 aa18.93■□□□□ 0.62
PRDM8-201ENST00000339711 TEX35Q5T0J7 233 aa18.93■□□□□ 0.62
PRDM8-201ENST00000339711 KRT40Q6A162 431 aa18.93■□□□□ 0.62
PRDM8-201ENST00000339711 TMX1Q9H3N1 280 aa18.93■□□□□ 0.62
PRDM8-201ENST00000339711 TEX11Q8IYF3 940 aa18.93■□□□□ 0.62
PRDM8-201ENST00000339711 DNAJC25Q9H1X3 360 aa18.93■□□□□ 0.62
PRDM8-201ENST00000339711 CCDC194A0A1B0GVG4 234 aa18.93■□□□□ 0.62
PRDM8-201ENST00000339711 CAVIN2O95810 425 aa18.93■□□□□ 0.62
PRDM8-201ENST00000339711 TNNT1P13805 278 aa18.93■□□□□ 0.62
PRDM8-201ENST00000339711 A0A1B0GVL5 298 aa18.92■□□□□ 0.62
PRDM8-201ENST00000339711 USP28Q96RU2 1077 aa18.92■□□□□ 0.62
PRDM8-201ENST00000339711 SAP30BPQ9UHR5 308 aaKnown RBP18.92■□□□□ 0.62
PRDM8-201ENST00000339711 SPATA31A6Q5VVP1 1343 aa18.92■□□□□ 0.62
PRDM8-201ENST00000339711 TNS2Q63HR2 1409 aa18.92■□□□□ 0.62
PRDM8-201ENST00000339711 SEMA3EO15041 775 aa18.92■□□□□ 0.62
PRDM8-201ENST00000339711 ARID4AP29374 1257 aaPredicted RBP18.92■□□□□ 0.62
PRDM8-201ENST00000339711 APOA5Q6Q788 366 aa18.92■□□□□ 0.62
PRDM8-201ENST00000339711 LIG1P18858 919 aa18.92■□□□□ 0.62
PRDM8-201ENST00000339711 DYNLL1P63167 89 aaKnown RBP18.92■□□□□ 0.62
PRDM8-201ENST00000339711 CCDC178Q5BJE1 867 aa18.92■□□□□ 0.62
PRDM8-201ENST00000339711 PTPN14Q15678 1187 aa18.91■□□□□ 0.62
PRDM8-201ENST00000339711 ZNF654Q8IZM8 581 aa18.91■□□□□ 0.62
PRDM8-201ENST00000339711 TMOD2Q9NZR1 351 aa18.91■□□□□ 0.62
PRDM8-201ENST00000339711 DEXIO95424 95 aa18.91■□□□□ 0.62
PRDM8-201ENST00000339711 ANO1Q5XXA6 986 aa18.91■□□□□ 0.62
PRDM8-201ENST00000339711 RGPD2P0DJD1 1756 aa18.91■□□□□ 0.62
PRDM8-201ENST00000339711 SMTNL1A8MU46 457 aa18.91■□□□□ 0.62
PRDM8-201ENST00000339711 CCDC186Q7Z3E2 898 aa18.91■□□□□ 0.62
PRDM8-201ENST00000339711 FBXO18Q8NFZ0 1043 aa18.91■□□□□ 0.62
PRDM8-201ENST00000339711 ZMYM6O95789 1325 aa18.9■□□□□ 0.62
PRDM8-201ENST00000339711 GNAQP50148 359 aa18.9■□□□□ 0.62
PRDM8-201ENST00000339711 ZSWIM5Q9P217 1185 aa18.9■□□□□ 0.62
PRDM8-201ENST00000339711 DACH1Q9UI36 760 aa18.9■□□□□ 0.62
PRDM8-201ENST00000339711 ZKSCAN5Q9Y2L8 839 aa18.9■□□□□ 0.62
PRDM8-201ENST00000339711 V9GY48 417 aaPredicted RBP18.9■□□□□ 0.62
PRDM8-201ENST00000339711 LMO7Q8WWI1 1683 aa18.9■□□□□ 0.62
PRDM8-201ENST00000339711 SFPQP23246 707 aaKnown RBP eCLIP18.9■□□□□ 0.62
PRDM8-201ENST00000339711 FAM160A1Q05DH4 1040 aa18.9■□□□□ 0.62
PRDM8-201ENST00000339711 RC3H1Q5TC82 1133 aaKnown RBP18.9■□□□□ 0.62
PRDM8-201ENST00000339711 DIS3L2Q8IYB7 885 aaKnown RBP18.9■□□□□ 0.62
PRDM8-201ENST00000339711 ALDH8A1Q9H2A2 487 aaPredicted RBP18.9■□□□□ 0.62
PRDM8-201ENST00000339711 LEMD3Q9Y2U8 911 aa18.9■□□□□ 0.62
PRDM8-201ENST00000339711 TNKSO95271 1327 aa18.9■□□□□ 0.62
PRDM8-201ENST00000339711 XDHP47989 1333 aa18.9■□□□□ 0.62
PRDM8-201ENST00000339711 HLA-DOAP06340 250 aa18.9■□□□□ 0.62
PRDM8-201ENST00000339711 C17orf53Q8N3J3 647 aaPredicted RBP18.9■□□□□ 0.62
PRDM8-201ENST00000339711 KCNB2Q92953 911 aa18.9■□□□□ 0.62
PRDM8-201ENST00000339711 ZBTB9Q96C00 473 aa18.9■□□□□ 0.62
PRDM8-201ENST00000339711 ERICH4A6NGS2 130 aa18.89■□□□□ 0.61
PRDM8-201ENST00000339711 HSPA1LP34931 641 aa18.89■□□□□ 0.61
PRDM8-201ENST00000339711 SF3B3Q15393 1217 aaKnown RBP18.89■□□□□ 0.61
PRDM8-201ENST00000339711 FAM47AQ5JRC9 791 aa18.89■□□□□ 0.61
PRDM8-201ENST00000339711 MYSM1Q5VVJ2 828 aa18.89■□□□□ 0.61
PRDM8-201ENST00000339711 CMTR1Q8N1G2 835 aaKnown RBP18.89■□□□□ 0.61
PRDM8-201ENST00000339711 TRIM75PA6NK02 468 aa18.89■□□□□ 0.61
PRDM8-201ENST00000339711 CCDC96Q2M329 555 aa18.89■□□□□ 0.61
PRDM8-201ENST00000339711 MFSD14BQ5SR56 506 aa18.89■□□□□ 0.61
PRDM8-201ENST00000339711 MAPKAPK5Q8IW41 473 aa18.89■□□□□ 0.61
PRDM8-201ENST00000339711 CERKQ8TCT0 537 aa18.89■□□□□ 0.61
PRDM8-201ENST00000339711 TGFBRAP1Q8WUH2 860 aa18.89■□□□□ 0.61
PRDM8-201ENST00000339711 ATP2B4P23634 1241 aa18.89■□□□□ 0.61
PRDM8-201ENST00000339711 TBC1D10CQ8IV04 446 aa18.89■□□□□ 0.61
PRDM8-201ENST00000339711 RBM28Q9NW13 759 aaKnown RBP18.89■□□□□ 0.61
PRDM8-201ENST00000339711 RPAP1Q9BWH6 1393 aaPredicted RBP18.88■□□□□ 0.61
PRDM8-201ENST00000339711 HSP90B2PQ58FF3 399 aa18.88■□□□□ 0.61
PRDM8-201ENST00000339711 PDCL3Q9H2J4 239 aa18.88■□□□□ 0.61
PRDM8-201ENST00000339711 CLSTN2Q9H4D0 955 aa18.88■□□□□ 0.61
PRDM8-201ENST00000339711 CARMIL3Q8ND23 1372 aa18.88■□□□□ 0.61
PRDM8-201ENST00000339711 NOLC1Q14978 699 aaKnown RBP eCLIP18.88■□□□□ 0.61
PRDM8-201ENST00000339711 DPP8Q6V1X1 898 aaPredicted RBP18.88■□□□□ 0.61
PRDM8-201ENST00000339711 FANCBQ8NB91 859 aa18.88■□□□□ 0.61
PRDM8-201ENST00000339711 CDK5RAP3Q96JB5 506 aa18.88■□□□□ 0.61
PRDM8-201ENST00000339711 ZNF512BQ96KM6 892 aaPredicted RBP18.88■□□□□ 0.61
PRDM8-201ENST00000339711 INCENPQ9NQS7 918 aa18.88■□□□□ 0.61
PRDM8-201ENST00000339711 MAPK8IP2Q13387 824 aaPredicted RBP18.88■□□□□ 0.61
PRDM8-201ENST00000339711 FILIP1LQ4L180 1135 aa18.88■□□□□ 0.61
PRDM8-201ENST00000339711 EYA3Q99504 573 aa18.88■□□□□ 0.61
PRDM8-201ENST00000339711 KCNJ14Q9UNX9 436 aa18.88■□□□□ 0.61
PRDM8-201ENST00000339711 FAM208AQ9UK61 1670 aaKnown RBP18.87■□□□□ 0.61
PRDM8-201ENST00000339711 hCG_1642624A0A1W2PR95 340 aa18.87■□□□□ 0.61
PRDM8-201ENST00000339711 GRAPQ13588 217 aa18.87■□□□□ 0.61
PRDM8-201ENST00000339711 GRAPLQ8TC17 118 aaPredicted RBP18.87■□□□□ 0.61
PRDM8-201ENST00000339711 CABP5Q9NP86 173 aa18.87■□□□□ 0.61
PRDM8-201ENST00000339711 SH2B2O14492 632 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms