RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 EVCP57679 992 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 NLRP5P59047 1200 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 CCDC25Q86WR0 208 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 C2CD5Q86YS7 1000 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 CKAP2LQ8IYA6 745 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 GBP7Q8N8V2 638 aaPredicted RBP3.71□□□□□ -1.82
CSMD3-202ENST00000339701 WHAMMQ8TF30 809 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 NECTIN2Q92692 538 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 RMND1Q9NWS8 449 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 PLCH1Q4KWH8 1693 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 GOLGA4Q13439 2230 aaKnown RBP3.71□□□□□ -1.82
CSMD3-202ENST00000339701 ELP1O95163 1332 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 RSPH3Q86UC2 560 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 RETREG2Q8NC44 543 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 PRDM5Q9NQX1 630 aaPredicted RBP3.71□□□□□ -1.82
CSMD3-202ENST00000339701 CEP170BQ9Y4F5 1589 aaPredicted RBP3.71□□□□□ -1.82
CSMD3-202ENST00000339701 ZBTB7AO95365 584 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 DUSP27Q5VZP5 1158 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 RPAINQ86UA6 219 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 CCDC144CPQ8IYA2 1237 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 ANO10Q9NW15 660 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 HMG20BQ9P0W2 317 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 SSX2IPQ9Y2D8 614 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 FKBP15Q5T1M5 1219 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 SLC16A10Q8TF71 515 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 GTF3C6Q969F1 213 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 CDCA7LQ96GN5 454 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 RSRC1Q96IZ7 334 aaKnown RBP3.71□□□□□ -1.82
CSMD3-202ENST00000339701 NAP1L4Q99733 375 aaKnown RBP3.71□□□□□ -1.82
CSMD3-202ENST00000339701 ANKRD2Q9GZV1 360 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 MAF1Q9H063 256 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 ANGPTL3Q9Y5C1 460 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 RNASELQ05823 741 aaKnown RBP3.71□□□□□ -1.82
CSMD3-202ENST00000339701 SMARCC2Q8TAQ2 1214 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 MIS12Q9H081 205 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 AP5M1Q9H0R1 490 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 LCMT1Q9UIC8 334 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 RASAL2Q9UJF2 1139 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 GNAT3A8MTJ3 354 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 CCDC40Q4G0X9 1142 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 FAM47CQ5HY64 1035 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 MSL1Q68DK7 614 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 DPP9Q86TI2 863 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 TIGD1Q96MW7 591 aa3.71□□□□□ -1.82
CSMD3-202ENST00000339701 DDX23Q9BUQ8 820 aaKnown RBP3.71□□□□□ -1.82
CSMD3-202ENST00000339701 RAB11FIP3O75154 756 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 SPA17Q15506 151 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 ISM2Q6H9L7 571 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 CACNA2D3Q8IZS8 1091 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 CCDC155Q8N6L0 562 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 GPATCH11Q8N954 259 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 RABEP2Q9H5N1 569 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 LRFN2Q9ULH4 789 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 NSFL1CQ9UNZ2 370 aaKnown RBP3.7□□□□□ -1.82
CSMD3-202ENST00000339701 NIP7Q9Y221 180 aaKnown RBP eCLIP3.7□□□□□ -1.82
CSMD3-202ENST00000339701 C4AP0C0L4 1744 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 C4BP0C0L5 1744 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 PIK3C2AO00443 1686 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 HOXC6P09630 235 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 EN1Q05925 392 aaPredicted RBP3.7□□□□□ -1.82
CSMD3-202ENST00000339701 TAX1BP1Q86VP1 789 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 WDR63Q8IWG1 891 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 TTLL6Q8N841 843 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 PRPF31Q8WWY3 499 aaKnown RBP3.7□□□□□ -1.82
CSMD3-202ENST00000339701 P3H4Q92791 437 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 FAM193BQ96PV7 902 aaPredicted RBP3.7□□□□□ -1.82
CSMD3-202ENST00000339701 TJP1Q07157 1748 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 KBTBD13C9JR72 458 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 MGEA5O60502 916 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 ACTN1P12814 892 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 ZNF569Q5MCW4 686 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 TTLL7Q6ZT98 887 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 CACNA2D4Q7Z3S7 1137 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 CCDC65Q8IXS2 484 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 TSKSQ9UJT2 592 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 IKBKGQ9Y6K9 419 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 F8W8V4 182 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 GMNNO75496 209 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 MYCP01106 439 aaPredicted RBP3.7□□□□□ -1.82
CSMD3-202ENST00000339701 ZNF853P0CG23 659 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 APBA1Q02410 837 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 METTL24Q5JXM2 366 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 CCDC170Q8IYT3 715 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 PRPF38AQ8NAV1 312 aaKnown RBP3.7□□□□□ -1.82
CSMD3-202ENST00000339701 DDX27Q96GQ7 796 aaKnown RBP3.7□□□□□ -1.82
CSMD3-202ENST00000339701 GJD4Q96KN9 370 aaPredicted RBP3.7□□□□□ -1.82
CSMD3-202ENST00000339701 FAM81BQ96LP2 452 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 GCNAQ96QF7 691 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 ARHGEF10LQ9HCE6 1279 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 ARFGAP3Q9NP61 516 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 CEP126Q9P2H0 1117 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 DAAM1Q9Y4D1 1078 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 GOLGA8JA6NMD2 632 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 YEATS4O95619 227 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 CBX1P83916 185 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 TRIM14Q14142 442 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 GADL1Q6ZQY3 521 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 CTNNBL1Q8WYA6 563 aaPredicted RBP3.7□□□□□ -1.82
CSMD3-202ENST00000339701 PCMTD1Q96MG8 357 aaPredicted RBP3.7□□□□□ -1.82
CSMD3-202ENST00000339701 TRIM5Q9C035 493 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms