RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 PARP10Q53GL7 1025 aa17.44■□□□□ 0.38
TNFSF13-201ENST00000338784 AKNAD1Q5T1N1 836 aa17.44■□□□□ 0.38
TNFSF13-201ENST00000338784 TIGD1Q96MW7 591 aa17.44■□□□□ 0.38
TNFSF13-201ENST00000338784 NACAP1Q9BZK3 213 aa17.44■□□□□ 0.38
TNFSF13-201ENST00000338784 FAM217BQ9NTX9 383 aaPredicted RBP17.44■□□□□ 0.38
TNFSF13-201ENST00000338784 SLIT2O94813 1529 aa17.43■□□□□ 0.38
TNFSF13-201ENST00000338784 NUP98P52948 1817 aa17.43■□□□□ 0.38
TNFSF13-201ENST00000338784 GSG1L2A8MUP6 293 aa17.43■□□□□ 0.38
TNFSF13-201ENST00000338784 RANBP6O60518 1105 aaKnown RBP17.43■□□□□ 0.38
TNFSF13-201ENST00000338784 U2AF2P26368 475 aaKnown RBP eCLIP17.43■□□□□ 0.38
TNFSF13-201ENST00000338784 IGHMBP2P38935 993 aaKnown RBP17.43■□□□□ 0.38
TNFSF13-201ENST00000338784 TPD52L1Q16890 204 aaPredicted RBP17.43■□□□□ 0.38
TNFSF13-201ENST00000338784 MFSD6Q6ZSS7 791 aa17.43■□□□□ 0.38
TNFSF13-201ENST00000338784 FILIP1Q7Z7B0 1213 aa17.43■□□□□ 0.38
TNFSF13-201ENST00000338784 MYL10Q9BUA6 226 aa17.43■□□□□ 0.38
TNFSF13-201ENST00000338784 MROH7-TTC4A0A0A0MT08 1334 aa17.42■□□□□ 0.38
TNFSF13-201ENST00000338784 STK36Q9NRP7 1315 aa17.42■□□□□ 0.38
TNFSF13-201ENST00000338784 TNNT1P13805 278 aa17.42■□□□□ 0.38
TNFSF13-201ENST00000338784 ATP6V1AP38606 617 aa17.42■□□□□ 0.38
TNFSF13-201ENST00000338784 SYKP43405 635 aa17.42■□□□□ 0.38
TNFSF13-201ENST00000338784 CRKLP46109 303 aaKnown RBP17.42■□□□□ 0.38
TNFSF13-201ENST00000338784 SSRP1Q08945 709 aaKnown RBP17.42■□□□□ 0.38
TNFSF13-201ENST00000338784 ZNF710Q8N1W2 664 aa17.42■□□□□ 0.38
TNFSF13-201ENST00000338784 PNPLA7Q6ZV29 1317 aa17.42■□□□□ 0.38
TNFSF13-201ENST00000338784 SKILP12757 684 aa17.42■□□□□ 0.38
TNFSF13-201ENST00000338784 BCAMP50895 628 aa17.42■□□□□ 0.38
TNFSF13-201ENST00000338784 TPM4P67936 248 aa17.42■□□□□ 0.38
TNFSF13-201ENST00000338784 ARID5BQ14865 1188 aa17.42■□□□□ 0.38
TNFSF13-201ENST00000338784 PTPAQ15257 358 aa17.42■□□□□ 0.38
TNFSF13-201ENST00000338784 WASF1Q92558 559 aa17.42■□□□□ 0.38
TNFSF13-201ENST00000338784 MAP3K14Q99558 947 aa17.42■□□□□ 0.38
TNFSF13-201ENST00000338784 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.42■□□□□ 0.38
TNFSF13-201ENST00000338784 SLC26A6Q9BXS9 759 aa17.42■□□□□ 0.38
TNFSF13-201ENST00000338784 THRAP3Q9Y2W1 955 aaKnown RBP17.42■□□□□ 0.38
TNFSF13-201ENST00000338784 BIN1O00499 593 aa17.41■□□□□ 0.38
TNFSF13-201ENST00000338784 CAMTA2O94983 1202 aa17.41■□□□□ 0.38
TNFSF13-201ENST00000338784 FMNL1O95466 1100 aaPredicted RBP17.41■□□□□ 0.38
TNFSF13-201ENST00000338784 TDO2P48775 406 aa17.41■□□□□ 0.38
TNFSF13-201ENST00000338784 GSDMDP57764 484 aa17.41■□□□□ 0.38
TNFSF13-201ENST00000338784 SART3Q15020 963 aaKnown RBP17.41■□□□□ 0.38
TNFSF13-201ENST00000338784 STAG1Q8WVM7 1258 aa17.41■□□□□ 0.38
TNFSF13-201ENST00000338784 BCL2L12Q9HB09 334 aa17.41■□□□□ 0.38
TNFSF13-201ENST00000338784 USP21Q9UK80 565 aa17.41■□□□□ 0.38
TNFSF13-201ENST00000338784 HPSEQ9Y251 543 aa17.41■□□□□ 0.38
TNFSF13-201ENST00000338784 SLC4A4Q9Y6R1 1079 aa17.41■□□□□ 0.38
TNFSF13-201ENST00000338784 A0A0G2JS52 829 aa17.4■□□□□ 0.38
TNFSF13-201ENST00000338784 SMTNL1A8MU46 457 aa17.4■□□□□ 0.38
TNFSF13-201ENST00000338784 PRKAB2O43741 272 aa17.4■□□□□ 0.38
TNFSF13-201ENST00000338784 SHC4Q6S5L8 630 aa17.4■□□□□ 0.38
TNFSF13-201ENST00000338784 LCORLQ8N3X6 602 aa17.4■□□□□ 0.38
TNFSF13-201ENST00000338784 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.4■□□□□ 0.38
TNFSF13-201ENST00000338784 IMPACTQ9P2X3 320 aa17.4■□□□□ 0.38
TNFSF13-201ENST00000338784 PAXBP1Q9Y5B6 917 aa17.4■□□□□ 0.38
TNFSF13-201ENST00000338784 TACC3Q9Y6A5 838 aa17.4■□□□□ 0.38
TNFSF13-201ENST00000338784 ARAP2Q8WZ64 1704 aa17.4■□□□□ 0.38
TNFSF13-201ENST00000338784 RTL9Q8NET4 1388 aa17.4■□□□□ 0.38
TNFSF13-201ENST00000338784 SPATA31A1Q5TZJ5 1347 aa17.4■□□□□ 0.38
TNFSF13-201ENST00000338784 FAM237AA0A1B0GTK4 181 aa17.4■□□□□ 0.38
TNFSF13-201ENST00000338784 CTIFO43310 598 aaKnown RBP17.4■□□□□ 0.38
TNFSF13-201ENST00000338784 IFNAR1P17181 557 aa17.4■□□□□ 0.38
TNFSF13-201ENST00000338784 LRP2BPQ9P2M1 347 aa17.4■□□□□ 0.38
TNFSF13-201ENST00000338784 TRPC5Q9UL62 973 aaPredicted RBP17.4■□□□□ 0.38
TNFSF13-201ENST00000338784 NIP7Q9Y221 180 aaKnown RBP eCLIP17.4■□□□□ 0.38
TNFSF13-201ENST00000338784 NID2Q14112 1375 aa17.4■□□□□ 0.38
TNFSF13-201ENST00000338784 NTSR2O95665 410 aa17.39■□□□□ 0.37
TNFSF13-201ENST00000338784 CCZ1BP86790 482 aa17.39■□□□□ 0.37
TNFSF13-201ENST00000338784 CCZ1P86791 482 aaPredicted RBP17.39■□□□□ 0.37
TNFSF13-201ENST00000338784 DDB1Q16531 1140 aa17.39■□□□□ 0.37
TNFSF13-201ENST00000338784 RRP12Q5JTH9 1297 aaKnown RBP17.39■□□□□ 0.37
TNFSF13-201ENST00000338784 RESP18Q5W5W9 173 aa17.39■□□□□ 0.37
TNFSF13-201ENST00000338784 NBPF11Q86T75 865 aa17.39■□□□□ 0.37
TNFSF13-201ENST00000338784 MTA3Q9BTC8 594 aa17.39■□□□□ 0.37
TNFSF13-201ENST00000338784 OSBPL5Q9H0X9 879 aaPredicted RBP17.39■□□□□ 0.37
TNFSF13-201ENST00000338784 TOMM22Q9NS69 142 aa17.39■□□□□ 0.37
TNFSF13-201ENST00000338784 TUBE1Q9UJT0 475 aa17.39■□□□□ 0.37
TNFSF13-201ENST00000338784 LOC102724428A0A0B4J2F2 783 aa17.39■□□□□ 0.37
TNFSF13-201ENST00000338784 ERICH2A1L162 156 aa17.39■□□□□ 0.37
TNFSF13-201ENST00000338784 CUTAO60888 179 aa17.39■□□□□ 0.37
TNFSF13-201ENST00000338784 SMC2O95347 1197 aa17.39■□□□□ 0.37
TNFSF13-201ENST00000338784 SIK1P57059 783 aa17.39■□□□□ 0.37
TNFSF13-201ENST00000338784 CHRNDQ07001 517 aa17.39■□□□□ 0.37
TNFSF13-201ENST00000338784 WTAPQ15007 396 aa17.39■□□□□ 0.37
TNFSF13-201ENST00000338784 SAMD1Q6SPF0 538 aaPredicted RBP17.39■□□□□ 0.37
TNFSF13-201ENST00000338784 TRIM22Q8IYM9 498 aa17.39■□□□□ 0.37
TNFSF13-201ENST00000338784 TMTC2Q8N394 836 aa17.39■□□□□ 0.37
TNFSF13-201ENST00000338784 CICQ96RK0 1608 aaPredicted RBP17.38■□□□□ 0.37
TNFSF13-201ENST00000338784 UBE2Q2LH0YL09 131 aa17.38■□□□□ 0.37
TNFSF13-201ENST00000338784 IKBKBO14920 756 aa17.38■□□□□ 0.37
TNFSF13-201ENST00000338784 NCAPHQ15003 741 aa17.38■□□□□ 0.37
TNFSF13-201ENST00000338784 SAFBQ15424 915 aaKnown RBP eCLIP17.38■□□□□ 0.37
TNFSF13-201ENST00000338784 NOSTRINQ8IVI9 506 aa17.38■□□□□ 0.37
TNFSF13-201ENST00000338784 FNBP4Q8N3X1 1017 aaPredicted RBP17.38■□□□□ 0.37
TNFSF13-201ENST00000338784 XPO4Q9C0E2 1151 aaKnown RBP17.38■□□□□ 0.37
TNFSF13-201ENST00000338784 RNF41Q9H4P4 317 aaPredicted RBP17.38■□□□□ 0.37
TNFSF13-201ENST00000338784 MYO5AQ9Y4I1 1855 aaKnown RBP17.38■□□□□ 0.37
TNFSF13-201ENST00000338784 RTN1Q16799 776 aa17.37■□□□□ 0.37
TNFSF13-201ENST00000338784 MIGA1Q8NAN2 632 aa17.37■□□□□ 0.37
TNFSF13-201ENST00000338784 ACSBG1Q96GR2 724 aa17.37■□□□□ 0.37
TNFSF13-201ENST00000338784 CLIC6Q96NY7 704 aa17.37■□□□□ 0.37
TNFSF13-201ENST00000338784 IFNKQ9P0W0 207 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms