RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 IFNKQ9P0W0 207 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 IQGAP1P46940 1657 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 ELP1O95163 1332 aa7.18□□□□□ -1.26
PRKDC-202ENST00000338368 CEP152O94986 1710 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 ZNF202O95125 648 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 SPAG1Q07617 926 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 IQUBQ8NA54 791 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 NUP88Q99567 741 aaPredicted RBP7.17□□□□□ -1.26
PRKDC-202ENST00000338368 KCNH3Q9ULD8 1083 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 PALLDQ8WX93 1383 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 PPP4R3BQ5MIZ7 849 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 OGFOD1Q8N543 542 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 TSG101Q99816 390 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 VPS54Q9P1Q0 977 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 VWA3AA6NCI4 1184 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 APOA5Q6Q788 366 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 KAZALD1Q96I82 304 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 LCORLQ8N3X6 602 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 IL25Q9H293 177 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 GPHNQ9NQX3 736 aaPredicted RBP7.17□□□□□ -1.26
PRKDC-202ENST00000338368 QRICH2Q9H0J4 1663 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 CDHR2Q9BYE9 1310 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 MCAMP43121 646 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 GNA11P29992 359 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 CACNA2D4Q7Z3S7 1137 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 DYNLL1P63167 89 aaKnown RBP7.17□□□□□ -1.26
PRKDC-202ENST00000338368 CUL5Q93034 780 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 NRKQ7Z2Y5 1582 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 KIF5CO60282 957 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 TOB2Q14106 344 aaPredicted RBP7.17□□□□□ -1.26
PRKDC-202ENST00000338368 KIF4BQ2VIQ3 1234 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 CCDC181Q5TID7 509 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 TXLNBQ8N3L3 684 aa7.17□□□□□ -1.26
PRKDC-202ENST00000338368 NR1I2O75469 434 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 TEX35Q5T0J7 233 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 FAM196AQ6ZSG2 479 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 ACBD3Q9H3P7 528 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 UTYO14607 1347 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 RFX5P48382 616 aaPredicted RBP7.16□□□□□ -1.26
PRKDC-202ENST00000338368 LETM2Q2VYF4 491 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 CLEC17AQ6ZS10 378 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 ATG9AQ7Z3C6 839 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.16□□□□□ -1.26
PRKDC-202ENST00000338368 ERCC4Q92889 916 aaPredicted RBP7.16□□□□□ -1.26
PRKDC-202ENST00000338368 CTAGE1Q96RT6 745 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 ZNF804BA4D1E1 1349 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 MTIF2P46199 727 aaKnown RBP7.16□□□□□ -1.26
PRKDC-202ENST00000338368 EIF6P56537 245 aaKnown RBP7.16□□□□□ -1.26
PRKDC-202ENST00000338368 SYCP1Q15431 976 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 ZSCAN10Q96SZ4 725 aaPredicted RBP7.16□□□□□ -1.26
PRKDC-202ENST00000338368 RCOR1Q9UKL0 485 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 CLEC4GQ6UXB4 293 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 CHGBP05060 677 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 NKX1-1Q15270 411 aaPredicted RBP7.16□□□□□ -1.26
PRKDC-202ENST00000338368 hCG_1642624A0A1W2PR95 340 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 POLR2DO15514 142 aaKnown RBP7.16□□□□□ -1.26
PRKDC-202ENST00000338368 PRKAB2O43741 272 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 CUTAO60888 179 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 CYP2E1P05181 493 aaPredicted RBP7.16□□□□□ -1.26
PRKDC-202ENST00000338368 TDRD12Q587J7 1177 aaKnown RBP7.16□□□□□ -1.26
PRKDC-202ENST00000338368 ZMYM6O95789 1325 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 CEP170BQ9Y4F5 1589 aaPredicted RBP7.16□□□□□ -1.26
PRKDC-202ENST00000338368 ERLIN1O75477 346 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 SCARF1Q14162 830 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 TGFBRAP1Q8WUH2 860 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 EXOC1Q9NV70 894 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 SEMA3EO15041 775 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 PARP1P09874 1014 aaKnown RBP7.16□□□□□ -1.26
PRKDC-202ENST00000338368 CT47A1Q5JQC4 288 aaPredicted RBP7.16□□□□□ -1.26
PRKDC-202ENST00000338368 KIAA1328Q86T90 577 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 GTF2IP78347 998 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 DPP8Q6V1X1 898 aaPredicted RBP7.16□□□□□ -1.26
PRKDC-202ENST00000338368 STRBPQ96SI9 672 aaKnown RBP7.16□□□□□ -1.26
PRKDC-202ENST00000338368 ATP8A2Q9NTI2 1148 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 PCDHA7Q9UN72 937 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 PAXBP1Q9Y5B6 917 aa7.16□□□□□ -1.26
PRKDC-202ENST00000338368 KCNQ2O43526 872 aa7.15□□□□□ -1.26
PRKDC-202ENST00000338368 LRRC27Q9C0I9 530 aa7.15□□□□□ -1.26
PRKDC-202ENST00000338368 KIAA1468Q9P260 1216 aa7.15□□□□□ -1.26
PRKDC-202ENST00000338368 SRP68Q9UHB9 627 aaKnown RBP7.15□□□□□ -1.26
PRKDC-202ENST00000338368 SERTAD1Q9UHV2 236 aa7.15□□□□□ -1.26
PRKDC-202ENST00000338368 MED23Q9ULK4 1368 aa7.15□□□□□ -1.26
PRKDC-202ENST00000338368 GOLGA6L9A6NEM1 432 aa7.15□□□□□ -1.26
PRKDC-202ENST00000338368 PSMA7O14818 248 aa7.15□□□□□ -1.26
PRKDC-202ENST00000338368 ALDH1B1P30837 517 aa7.15□□□□□ -1.26
PRKDC-202ENST00000338368 NOSTRINQ8IVI9 506 aa7.15□□□□□ -1.26
PRKDC-202ENST00000338368 FGFR1OPO95684 399 aaKnown RBP7.15□□□□□ -1.26
PRKDC-202ENST00000338368 CSF1RP07333 972 aa7.15□□□□□ -1.26
PRKDC-202ENST00000338368 KRT79Q5XKE5 535 aa7.15□□□□□ -1.26
PRKDC-202ENST00000338368 CEP135Q66GS9 1140 aa7.15□□□□□ -1.26
PRKDC-202ENST00000338368 FTOQ9C0B1 505 aaKnown RBP eCLIP7.15□□□□□ -1.263e-6■■□□□ 13.1
PRKDC-202ENST00000338368 TRAF1Q13077 416 aa7.15□□□□□ -1.26
PRKDC-202ENST00000338368 SLC39A14Q15043 492 aa7.15□□□□□ -1.26
PRKDC-202ENST00000338368 UBA5Q9GZZ9 404 aa7.15□□□□□ -1.26
PRKDC-202ENST00000338368 RPS6KA4O75676 772 aa7.15□□□□□ -1.26
PRKDC-202ENST00000338368 PFKFB1P16118 471 aa7.15□□□□□ -1.26
PRKDC-202ENST00000338368 RESTQ13127 1097 aa7.15□□□□□ -1.26
PRKDC-202ENST00000338368 SPA17Q15506 151 aa7.15□□□□□ -1.26
PRKDC-202ENST00000338368 TTC38Q5R3I4 469 aa7.15□□□□□ -1.26
PRKDC-202ENST00000338368 RRP9O43818 475 aaKnown RBP7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms