RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 RGS3P49796 1198 aa14.32□□□□□ -0.12
CSMD2-202ENST00000338325 IDI2Q9BXS1 227 aa14.32□□□□□ -0.12
CSMD2-202ENST00000338325 PICK1Q9NRD5 415 aa14.32□□□□□ -0.12
CSMD2-202ENST00000338325 RBM27Q9P2N5 1060 aaKnown RBP14.32□□□□□ -0.12
CSMD2-202ENST00000338325 GABRQQ9UN88 632 aa14.32□□□□□ -0.12
CSMD2-202ENST00000338325 ZHX2Q9Y6X8 837 aa14.32□□□□□ -0.12
CSMD2-202ENST00000338325 ATAD5Q96QE3 1844 aa14.32□□□□□ -0.12
CSMD2-202ENST00000338325 E9PSI1 815 aa14.31□□□□□ -0.12
CSMD2-202ENST00000338325 PTPRAP18433 802 aa14.31□□□□□ -0.12
CSMD2-202ENST00000338325 PHKA1P46020 1223 aa14.31□□□□□ -0.12
CSMD2-202ENST00000338325 GADL1Q6ZQY3 521 aa14.31□□□□□ -0.12
CSMD2-202ENST00000338325 ZGPATQ8N5A5 531 aaKnown RBP14.31□□□□□ -0.12
CSMD2-202ENST00000338325 U2AF1L4Q8WU68 220 aaKnown RBP14.31□□□□□ -0.12
CSMD2-202ENST00000338325 SLC45A1Q9Y2W3 748 aa14.31□□□□□ -0.12
CSMD2-202ENST00000338325 GAKO14976 1311 aa14.31□□□□□ -0.12
CSMD2-202ENST00000338325 LOC285556D6RIA3 1793 aa14.31□□□□□ -0.12
CSMD2-202ENST00000338325 ZBTB22O15209 634 aa14.31□□□□□ -0.12
CSMD2-202ENST00000338325 FARP2O94887 1054 aaPredicted RBP14.31□□□□□ -0.12
CSMD2-202ENST00000338325 UBTFL1P0CB47 393 aaPredicted RBP14.31□□□□□ -0.12
CSMD2-202ENST00000338325 ALDH1L2Q3SY69 923 aa14.31□□□□□ -0.12
CSMD2-202ENST00000338325 UNC93B1Q9H1C4 597 aa14.31□□□□□ -0.12
CSMD2-202ENST00000338325 AFG3L2Q9Y4W6 797 aa14.31□□□□□ -0.12
CSMD2-202ENST00000338325 NR2E3Q9Y5X4 410 aa14.31□□□□□ -0.12
CSMD2-202ENST00000338325 SZT2Q5T011 3432 aa14.3□□□□□ -0.12
CSMD2-202ENST00000338325 ALPK3Q96L96 1907 aa14.3□□□□□ -0.12
CSMD2-202ENST00000338325 ADCY3O60266 1144 aa14.3□□□□□ -0.12
CSMD2-202ENST00000338325 IL15P40933 162 aaPredicted RBP14.3□□□□□ -0.12
CSMD2-202ENST00000338325 MAP3K10Q02779 954 aa14.3□□□□□ -0.12
CSMD2-202ENST00000338325 SH3BP5LQ7L8J4 393 aa14.3□□□□□ -0.12
CSMD2-202ENST00000338325 ZSCAN29Q8IWY8 852 aaPredicted RBP14.3□□□□□ -0.12
CSMD2-202ENST00000338325 PRO3102Q9H379 93 aa14.3□□□□□ -0.12
CSMD2-202ENST00000338325 LRRFIP2Q9Y608 721 aaKnown RBP14.3□□□□□ -0.12
CSMD2-202ENST00000338325 DOCK3Q8IZD9 2030 aa14.29□□□□□ -0.12
CSMD2-202ENST00000338325 SGPL1O95470 568 aa14.29□□□□□ -0.12
CSMD2-202ENST00000338325 FLT3LGP49771 235 aa14.29□□□□□ -0.12
CSMD2-202ENST00000338325 CCDC102BQ68D86 513 aa14.29□□□□□ -0.12
CSMD2-202ENST00000338325 DZIP1Q86YF9 867 aaKnown RBP14.29□□□□□ -0.12
CSMD2-202ENST00000338325 SLF2Q8IX21 1173 aa14.29□□□□□ -0.12
CSMD2-202ENST00000338325 PXYLP1Q8TE99 480 aa14.29□□□□□ -0.12
CSMD2-202ENST00000338325 SMCR8Q8TEV9 937 aaPredicted RBP14.29□□□□□ -0.12
CSMD2-202ENST00000338325 SMC4Q9NTJ3 1288 aa14.29□□□□□ -0.12
CSMD2-202ENST00000338325 PDS5AQ29RF7 1337 aaKnown RBP14.29□□□□□ -0.12
CSMD2-202ENST00000338325 DDTLA6NHG4 134 aaPredicted RBP14.28□□□□□ -0.12
CSMD2-202ENST00000338325 TNPO2O14787 897 aaKnown RBP14.28□□□□□ -0.12
CSMD2-202ENST00000338325 ZBTB7BO15156 539 aaPredicted RBP14.28□□□□□ -0.12
CSMD2-202ENST00000338325 CTNND1O60716 968 aaKnown RBP14.28□□□□□ -0.12
CSMD2-202ENST00000338325 INHAP05111 366 aa14.28□□□□□ -0.12
CSMD2-202ENST00000338325 ELNP15502 786 aa14.28□□□□□ -0.12
CSMD2-202ENST00000338325 CAPN2P17655 700 aa14.28□□□□□ -0.12
CSMD2-202ENST00000338325 ADORA1P30542 326 aa14.28□□□□□ -0.12
CSMD2-202ENST00000338325 IRF5Q13568 498 aa14.28□□□□□ -0.12
CSMD2-202ENST00000338325 DDX4Q9NQI0 724 aaKnown RBP14.28□□□□□ -0.12
CSMD2-202ENST00000338325 RANBP2P49792 3224 aaKnown RBP14.28□□□□□ -0.12
CSMD2-202ENST00000338325 TRIM75PA6NK02 468 aa14.27□□□□□ -0.12
CSMD2-202ENST00000338325 BTDP43251 543 aa14.27□□□□□ -0.12
CSMD2-202ENST00000338325 SLFN5Q08AF3 891 aa14.27□□□□□ -0.12
CSMD2-202ENST00000338325 PICALMQ13492 652 aa14.27□□□□□ -0.12
CSMD2-202ENST00000338325 RASGRF1Q13972 1273 aa14.27□□□□□ -0.12
CSMD2-202ENST00000338325 FAM163AQ96GL9 167 aaPredicted RBP14.27□□□□□ -0.12
CSMD2-202ENST00000338325 ABCF2Q9UG63 623 aa14.27□□□□□ -0.12
CSMD2-202ENST00000338325 AGTPBP1Q9UPW5 1226 aa14.27□□□□□ -0.12
CSMD2-202ENST00000338325 PA2G4Q9UQ80 394 aaKnown RBP14.27□□□□□ -0.12
CSMD2-202ENST00000338325 MROH7-TTC4A0A0A0MT08 1334 aa14.26□□□□□ -0.13
CSMD2-202ENST00000338325 SLURP2P0DP57 97 aa14.26□□□□□ -0.13
CSMD2-202ENST00000338325 SPTY2D1Q68D10 685 aaPredicted RBP14.26□□□□□ -0.13
CSMD2-202ENST00000338325 COPRSQ9NQ92 184 aa14.26□□□□□ -0.13
CSMD2-202ENST00000338325 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.26□□□□□ -0.13
CSMD2-202ENST00000338325 HDAC5Q9UQL6 1122 aa14.26□□□□□ -0.13
CSMD2-202ENST00000338325 A0A1W2PPC1 479 aa14.25□□□□□ -0.13
CSMD2-202ENST00000338325 ZNF316A6NFI3 1004 aaPredicted RBP14.25□□□□□ -0.13
CSMD2-202ENST00000338325 EVI5O60447 810 aa14.25□□□□□ -0.13
CSMD2-202ENST00000338325 TFRCP02786 760 aaKnown RBP14.25□□□□□ -0.13
CSMD2-202ENST00000338325 CCDC84Q86UT8 332 aaPredicted RBP14.25□□□□□ -0.13
CSMD2-202ENST00000338325 COA7Q96BR5 231 aa14.25□□□□□ -0.13
CSMD2-202ENST00000338325 DEFB118Q96PH6 123 aa14.25□□□□□ -0.13
CSMD2-202ENST00000338325 PAK6Q9NQU5 681 aaPredicted RBP14.25□□□□□ -0.13
CSMD2-202ENST00000338325 PNMA3Q9UL41 463 aa14.25□□□□□ -0.13
CSMD2-202ENST00000338325 COL2A1P02458 1487 aaPredicted RBP14.25□□□□□ -0.13
CSMD2-202ENST00000338325 TBC1D12O60347 775 aa14.25□□□□□ -0.13
CSMD2-202ENST00000338325 FAM110CQ1W6H9 321 aa14.25□□□□□ -0.13
CSMD2-202ENST00000338325 ANKRD13CQ8N6S4 541 aa14.25□□□□□ -0.13
CSMD2-202ENST00000338325 PROCA1Q8NCQ7 364 aaPredicted RBP14.25□□□□□ -0.13
CSMD2-202ENST00000338325 TAOK2Q9UL54 1235 aa14.25□□□□□ -0.13
CSMD2-202ENST00000338325 PLXNB2O15031 1838 aa14.24□□□□□ -0.13
CSMD2-202ENST00000338325 TIMM10P62072 90 aa14.24□□□□□ -0.13
CSMD2-202ENST00000338325 MECOMQ03112 1051 aa14.24□□□□□ -0.13
CSMD2-202ENST00000338325 TREML2Q5T2D2 321 aa14.24□□□□□ -0.13
CSMD2-202ENST00000338325 ERICH6Q7L0X2 663 aa14.24□□□□□ -0.13
CSMD2-202ENST00000338325 CRISPLD2Q9H0B8 497 aa14.24□□□□□ -0.13
CSMD2-202ENST00000338325 MAST2Q6P0Q8 1798 aa14.23□□□□□ -0.13
CSMD2-202ENST00000338325 DDX60LQ5H9U9 1706 aaKnown RBP14.23□□□□□ -0.13
CSMD2-202ENST00000338325 GPR75-ASB3A0A0A6YYF3 556 aa14.23□□□□□ -0.13
CSMD2-202ENST00000338325 A0A1B0GUL7 405 aa14.23□□□□□ -0.13
CSMD2-202ENST00000338325 NPM3O75607 178 aaKnown RBP14.23□□□□□ -0.13
CSMD2-202ENST00000338325 RHBDL3P58872 404 aa14.23□□□□□ -0.13
CSMD2-202ENST00000338325 MVPQ14764 893 aaKnown RBP14.23□□□□□ -0.13
CSMD2-202ENST00000338325 XAGE2Q96GT9 111 aa14.23□□□□□ -0.13
CSMD2-202ENST00000338325 API5Q9BZZ5 524 aaKnown RBP14.23□□□□□ -0.13
CSMD2-202ENST00000338325 OSBPL5Q9H0X9 879 aaPredicted RBP14.23□□□□□ -0.13
CSMD2-202ENST00000338325 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms