RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 ZNF790Q6PG37 636 aa13.58□□□□□ -0.24
RBM39-202ENST00000338163 STK11IPQ8N1F8 1099 aa13.58□□□□□ -0.24
RBM39-202ENST00000338163 MRFAP1Q9Y605 127 aa13.58□□□□□ -0.24
RBM39-202ENST00000338163 CMA1P23946 247 aa13.58□□□□□ -0.24
RBM39-202ENST00000338163 TIMM10P62072 90 aa13.58□□□□□ -0.24
RBM39-202ENST00000338163 MAP3K9P80192 1104 aa13.58□□□□□ -0.24
RBM39-202ENST00000338163 ATP8B1O43520 1251 aa13.57□□□□□ -0.24
RBM39-202ENST00000338163 HSP90AB3PQ58FF7 597 aa13.57□□□□□ -0.24
RBM39-202ENST00000338163 AXDND1Q5T1B0 1012 aaPredicted RBP13.57□□□□□ -0.24
RBM39-202ENST00000338163 LEKR1Q6ZMV7 388 aa13.57□□□□□ -0.24
RBM39-202ENST00000338163 AIFM3Q96NN9 605 aa13.57□□□□□ -0.24
RBM39-202ENST00000338163 CLIC6Q96NY7 704 aa13.57□□□□□ -0.24
RBM39-202ENST00000338163 PDE11AQ9HCR9 933 aa13.57□□□□□ -0.24
RBM39-202ENST00000338163 UTYO14607 1347 aa13.57□□□□□ -0.24
RBM39-202ENST00000338163 PHACTR2O75167 634 aa13.57□□□□□ -0.24
RBM39-202ENST00000338163 SPECC1Q5M775 1068 aa13.57□□□□□ -0.24
RBM39-202ENST00000338163 WWC2Q6AWC2 1192 aa13.57□□□□□ -0.24
RBM39-202ENST00000338163 COPRSQ9NQ92 184 aa13.57□□□□□ -0.24
RBM39-202ENST00000338163 ASAP1Q9ULH1 1129 aa13.57□□□□□ -0.24
RBM39-202ENST00000338163 DHX16O60231 1041 aaKnown RBP13.56□□□□□ -0.24
RBM39-202ENST00000338163 RXRAP19793 462 aa13.56□□□□□ -0.24
RBM39-202ENST00000338163 WASHC4Q2M389 1173 aa13.56□□□□□ -0.24
RBM39-202ENST00000338163 BRAPQ7Z569 592 aa13.56□□□□□ -0.24
RBM39-202ENST00000338163 TRMT44Q8IYL2 757 aaKnown RBP13.56□□□□□ -0.24
RBM39-202ENST00000338163 RABGGTAQ92696 567 aa13.56□□□□□ -0.24
RBM39-202ENST00000338163 SH3TC1Q8TE82 1336 aa13.56□□□□□ -0.24
RBM39-202ENST00000338163 FKBP4Q02790 459 aaKnown RBP eCLIP13.56□□□□□ -0.24
RBM39-202ENST00000338163 MTF1Q14872 753 aa13.56□□□□□ -0.24
RBM39-202ENST00000338163 KRT27Q7Z3Y8 459 aa13.56□□□□□ -0.24
RBM39-202ENST00000338163 CNNM3Q8NE01 707 aa13.56□□□□□ -0.24
RBM39-202ENST00000338163 GOLGA5Q8TBA6 731 aa13.56□□□□□ -0.24
RBM39-202ENST00000338163 ZNF496Q96IT1 587 aaPredicted RBP13.56□□□□□ -0.24
RBM39-202ENST00000338163 DSCC1Q9BVC3 393 aa13.56□□□□□ -0.24
RBM39-202ENST00000338163 AGXT2Q9BYV1 514 aa13.56□□□□□ -0.24
RBM39-202ENST00000338163 UBXN6Q9BZV1 441 aa13.56□□□□□ -0.24
RBM39-202ENST00000338163 RRP15Q9Y3B9 282 aaKnown RBP13.56□□□□□ -0.24
RBM39-202ENST00000338163 MAST3O60307 1309 aa13.56□□□□□ -0.24
RBM39-202ENST00000338163 A0A087WZG4 1122 aa13.55□□□□□ -0.24
RBM39-202ENST00000338163 PRC1O43663 620 aa13.55□□□□□ -0.24
RBM39-202ENST00000338163 TXLNAP40222 546 aa13.55□□□□□ -0.24
RBM39-202ENST00000338163 CHMP4BP1P59074 171 aa13.55□□□□□ -0.24
RBM39-202ENST00000338163 KIF23Q02241 960 aaPredicted RBP13.55□□□□□ -0.24
RBM39-202ENST00000338163 ZNF827Q17R98 1081 aa13.55□□□□□ -0.24
RBM39-202ENST00000338163 SKIDA1Q1XH10 827 aa13.55□□□□□ -0.24
RBM39-202ENST00000338163 PTF1AQ7RTS3 328 aa13.55□□□□□ -0.24
RBM39-202ENST00000338163 INTS13Q9NVM9 706 aa13.55□□□□□ -0.24
RBM39-202ENST00000338163 SHANK3Q9BYB0 1731 aa13.55□□□□□ -0.24
RBM39-202ENST00000338163 GOLGA6L9A6NEM1 432 aa13.55□□□□□ -0.24
RBM39-202ENST00000338163 TMEM139Q8IV31 216 aa13.55□□□□□ -0.24
RBM39-202ENST00000338163 CPLX3Q8WVH0 158 aa13.55□□□□□ -0.24
RBM39-202ENST00000338163 EXOC4Q96A65 974 aa13.55□□□□□ -0.24
RBM39-202ENST00000338163 SUGCTQ9HAC7 445 aa13.55□□□□□ -0.24
RBM39-202ENST00000338163 PCDHA5Q9Y5H7 936 aa13.55□□□□□ -0.24
RBM39-202ENST00000338163 CDC27P30260 824 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 PDIA6Q15084 440 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 JAKMIP3Q5VZ66 844 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 SHC4Q6S5L8 630 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 LMBR1LQ6UX01 489 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 RSRC2Q7L4I2 434 aaKnown RBP13.54□□□□□ -0.24
RBM39-202ENST00000338163 RALYLQ86SE5 291 aaKnown RBP13.54□□□□□ -0.24
RBM39-202ENST00000338163 FCHSD1Q86WN1 690 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 CHMP4CQ96CF2 233 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 HELLSQ9NRZ9 838 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 ANKRD65E5RJM6 399 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 FOXN1O15353 648 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 N4BP1O75113 896 aaKnown RBP13.54□□□□□ -0.24
RBM39-202ENST00000338163 RHOXF2BP0C7M4 288 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 PDE4BQ07343 736 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 LONRF3Q496Y0 759 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 CCDC102AQ96A19 550 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 RHOXF2Q9BQY4 288 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 NFE2L3Q9Y4A8 694 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 CCDC151A5D8V7 595 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 M0R2C6 588 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 TULP1O00294 542 aaPredicted RBP13.54□□□□□ -0.24
RBM39-202ENST00000338163 ACTN2P35609 894 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 RFX5P48382 616 aaPredicted RBP13.54□□□□□ -0.24
RBM39-202ENST00000338163 SLC39A14Q15043 492 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 SPECC1LQ69YQ0 1117 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 ANKRD13DQ6ZTN6 518 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 SRLQ86TD4 932 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 VPS37DQ86XT2 251 aa13.54□□□□□ -0.24
RBM39-202ENST00000338163 MRPL44Q9H9J2 332 aaKnown RBP13.54□□□□□ -0.24
RBM39-202ENST00000338163 SOWAHDA6NJG2 315 aa13.53□□□□□ -0.24
RBM39-202ENST00000338163 STX10O60499 249 aa13.53□□□□□ -0.24
RBM39-202ENST00000338163 TFRCP02786 760 aaKnown RBP13.53□□□□□ -0.24
RBM39-202ENST00000338163 IFIT1P09914 478 aaKnown RBP13.53□□□□□ -0.24
RBM39-202ENST00000338163 ZMYM1Q5SVZ6 1142 aa13.53□□□□□ -0.24
RBM39-202ENST00000338163 CCDC102BQ68D86 513 aa13.53□□□□□ -0.24
RBM39-202ENST00000338163 METTL16Q86W50 562 aaKnown RBP13.53□□□□□ -0.24
RBM39-202ENST00000338163 KIFC2Q96AC6 838 aa13.53□□□□□ -0.24
RBM39-202ENST00000338163 METTL22Q9BUU2 404 aaPredicted RBP13.53□□□□□ -0.24
RBM39-202ENST00000338163 TUBE1Q9UJT0 475 aa13.53□□□□□ -0.24
RBM39-202ENST00000338163 WNK3Q9BYP7 1800 aa13.53□□□□□ -0.24
RBM39-202ENST00000338163 IMMTQ16891 758 aaKnown RBP13.53□□□□□ -0.24
RBM39-202ENST00000338163 JMYQ8N9B5 988 aa13.53□□□□□ -0.24
RBM39-202ENST00000338163 TC2NQ8N9U0 490 aa13.53□□□□□ -0.24
RBM39-202ENST00000338163 PHKBQ93100 1093 aa13.53□□□□□ -0.24
RBM39-202ENST00000338163 ALG1Q9BT22 464 aa13.53□□□□□ -0.24
RBM39-202ENST00000338163 ATG3Q9NT62 314 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms