RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 HSPA1LP34931 641 aa26.93■■□□□ 1.9
CLPTM1-201ENST00000337392 TPTE2Q6XPS3 522 aa26.93■■□□□ 1.9
CLPTM1-201ENST00000337392 MYSM1Q5VVJ2 828 aa26.93■■□□□ 1.9
CLPTM1-201ENST00000337392 DDX19AQ9NUU7 478 aaKnown RBP26.93■■□□□ 1.9
CLPTM1-201ENST00000337392 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.93■■□□□ 1.91e-6■□□□□ 8.8
CLPTM1-201ENST00000337392 CHD4Q14839 1912 aa26.92■■□□□ 1.9
CLPTM1-201ENST00000337392 CCDC69A6NI79 296 aa26.92■■□□□ 1.9
CLPTM1-201ENST00000337392 KRT40Q6A162 431 aa26.92■■□□□ 1.9
CLPTM1-201ENST00000337392 NACAP1Q9BZK3 213 aa26.92■■□□□ 1.9
CLPTM1-201ENST00000337392 CBX8Q9HC52 389 aa26.92■■□□□ 1.9
CLPTM1-201ENST00000337392 MECOMQ03112 1051 aa26.92■■□□□ 1.9
CLPTM1-201ENST00000337392 SLC10A5Q5PT55 438 aa26.92■■□□□ 1.9
CLPTM1-201ENST00000337392 SEPT12Q8IYM1 358 aa26.92■■□□□ 1.9
CLPTM1-201ENST00000337392 GNL3LQ9NVN8 582 aaKnown RBP26.92■■□□□ 1.9
CLPTM1-201ENST00000337392 LINC00301Q8NCQ3 95 aa26.91■■□□□ 1.9
CLPTM1-201ENST00000337392 ZNF396Q96N95 335 aaPredicted RBP26.91■■□□□ 1.9
CLPTM1-201ENST00000337392 KCNJ14Q9UNX9 436 aa26.91■■□□□ 1.9
CLPTM1-201ENST00000337392 PNPLA7Q6ZV29 1317 aa26.91■■□□□ 1.9
CLPTM1-201ENST00000337392 NDUFA8P51970 172 aa26.91■■□□□ 1.9
CLPTM1-201ENST00000337392 STK38Q15208 465 aa26.91■■□□□ 1.9
CLPTM1-201ENST00000337392 NMT2O60551 498 aa26.9■■□□□ 1.9
CLPTM1-201ENST00000337392 C11orf57Q6ZUT1 292 aaPredicted RBP26.9■■□□□ 1.9
CLPTM1-201ENST00000337392 TMEM87BQ96K49 555 aa26.9■■□□□ 1.9
CLPTM1-201ENST00000337392 ZKSCAN5Q9Y2L8 839 aa26.9■■□□□ 1.9
CLPTM1-201ENST00000337392 A0A1B0GUL6 1792 aa26.9■■□□□ 1.9
CLPTM1-201ENST00000337392 CACNA1SQ13698 1873 aa26.9■■□□□ 1.9
CLPTM1-201ENST00000337392 CYP2D6P10635 497 aa26.9■■□□□ 1.9
CLPTM1-201ENST00000337392 IARSP41252 1262 aaKnown RBP26.9■■□□□ 1.9
CLPTM1-201ENST00000337392 GRIK5Q16478 980 aa26.9■■□□□ 1.9
CLPTM1-201ENST00000337392 MYH13Q9UKX3 1938 aa26.89■■□□□ 1.9
CLPTM1-201ENST00000337392 SF3A1Q15459 793 aaKnown RBP26.89■■□□□ 1.9
CLPTM1-201ENST00000337392 TRAPPC3LQ5T215 181 aa26.89■■□□□ 1.9
CLPTM1-201ENST00000337392 RC3H1Q5TC82 1133 aaKnown RBP26.89■■□□□ 1.9
CLPTM1-201ENST00000337392 STAG1Q8WVM7 1258 aa26.89■■□□□ 1.9
CLPTM1-201ENST00000337392 SCN7AQ01118 1682 aa26.89■■□□□ 1.9
CLPTM1-201ENST00000337392 WDR19Q8NEZ3 1342 aa26.89■■□□□ 1.9
CLPTM1-201ENST00000337392 MYH2Q9UKX2 1941 aa26.89■■□□□ 1.9
CLPTM1-201ENST00000337392 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.89■■□□□ 1.9
CLPTM1-201ENST00000337392 HIBADHP31937 336 aaKnown RBP26.89■■□□□ 1.9
CLPTM1-201ENST00000337392 WTAPQ15007 396 aa26.89■■□□□ 1.9
CLPTM1-201ENST00000337392 FBXO33Q7Z6M2 555 aa26.89■■□□□ 1.9
CLPTM1-201ENST00000337392 FAM200AQ8TCP9 573 aa26.89■■□□□ 1.9
CLPTM1-201ENST00000337392 NYXQ9GZU5 481 aa26.89■■□□□ 1.9
CLPTM1-201ENST00000337392 ANKIB1Q9P2G1 1089 aa26.89■■□□□ 1.9
CLPTM1-201ENST00000337392 SGMS1Q86VZ5 419 aa26.88■■□□□ 1.89
CLPTM1-201ENST00000337392 NSUN4Q96CB9 384 aaKnown RBP26.88■■□□□ 1.89
CLPTM1-201ENST00000337392 TNRC6CQ9HCJ0 1690 aaKnown RBP26.88■■□□□ 1.89
CLPTM1-201ENST00000337392 ENGASEQ8NFI3 743 aa26.88■■□□□ 1.89
CLPTM1-201ENST00000337392 USP17L12C9JPN9 530 aa26.87■■□□□ 1.89
CLPTM1-201ENST00000337392 USP17L21D6R901 530 aa26.87■■□□□ 1.89
CLPTM1-201ENST00000337392 WDHD1O75717 1129 aaPredicted RBP26.87■■□□□ 1.89
CLPTM1-201ENST00000337392 SASS6Q6UVJ0 657 aa26.87■■□□□ 1.89
CLPTM1-201ENST00000337392 CCDC39Q9UFE4 941 aa26.87■■□□□ 1.89
CLPTM1-201ENST00000337392 UVSSAQ2YD98 709 aa26.87■■□□□ 1.89
CLPTM1-201ENST00000337392 CCDC73Q6ZRK6 1079 aa26.87■■□□□ 1.89
CLPTM1-201ENST00000337392 RTEL1Q9NZ71 1219 aa26.87■■□□□ 1.89
CLPTM1-201ENST00000337392 RBM43Q6ZSC3 357 aaKnown RBP26.86■■□□□ 1.89
CLPTM1-201ENST00000337392 KRT23Q9C075 422 aa26.86■■□□□ 1.89
CLPTM1-201ENST00000337392 MROH7-TTC4A0A0A0MT08 1334 aa26.86■■□□□ 1.89
CLPTM1-201ENST00000337392 TNKSO95271 1327 aa26.86■■□□□ 1.89
CLPTM1-201ENST00000337392 GNL2Q13823 731 aaKnown RBP26.86■■□□□ 1.89
CLPTM1-201ENST00000337392 GNAT2P19087 354 aa26.86■■□□□ 1.89
CLPTM1-201ENST00000337392 ZNF165P49910 485 aa26.86■■□□□ 1.89
CLPTM1-201ENST00000337392 FAM47AQ5JRC9 791 aa26.86■■□□□ 1.89
CLPTM1-201ENST00000337392 ISM2Q6H9L7 571 aa26.86■■□□□ 1.89
CLPTM1-201ENST00000337392 SYNE3Q6ZMZ3 975 aa26.86■■□□□ 1.89
CLPTM1-201ENST00000337392 CLIC6Q96NY7 704 aa26.86■■□□□ 1.89
CLPTM1-201ENST00000337392 SPTLC2O15270 562 aa26.85■■□□□ 1.89
CLPTM1-201ENST00000337392 LIFRP42702 1097 aa26.85■■□□□ 1.89
CLPTM1-201ENST00000337392 SPECC1Q5M775 1068 aa26.85■■□□□ 1.89
CLPTM1-201ENST00000337392 BTBD18B2RXH4 712 aa26.85■■□□□ 1.89
CLPTM1-201ENST00000337392 DIXDC1Q155Q3 683 aa26.85■■□□□ 1.89
CLPTM1-201ENST00000337392 CTR9Q6PD62 1173 aa26.85■■□□□ 1.89
CLPTM1-201ENST00000337392 PIBF1Q8WXW3 757 aa26.85■■□□□ 1.89
CLPTM1-201ENST00000337392 CNNM2Q9H8M5 875 aa26.85■■□□□ 1.89
CLPTM1-201ENST00000337392 ATP2B1P20020 1258 aa26.84■■□□□ 1.89
CLPTM1-201ENST00000337392 UBAC1Q9BSL1 405 aa26.84■■□□□ 1.89
CLPTM1-201ENST00000337392 KINO60870 393 aaKnown RBP26.84■■□□□ 1.89
CLPTM1-201ENST00000337392 FAM160A1Q05DH4 1040 aa26.84■■□□□ 1.89
CLPTM1-201ENST00000337392 NR5A1Q13285 461 aa26.84■■□□□ 1.89
CLPTM1-201ENST00000337392 ANO1Q5XXA6 986 aa26.84■■□□□ 1.89
CLPTM1-201ENST00000337392 ECM29Q5VYK3 1845 aa26.83■■□□□ 1.89
CLPTM1-201ENST00000337392 BIN1O00499 593 aa26.83■■□□□ 1.89
CLPTM1-201ENST00000337392 HSP90AA2PQ14568 343 aaPredicted RBP26.83■■□□□ 1.89
CLPTM1-201ENST00000337392 RTN1Q16799 776 aa26.83■■□□□ 1.89
CLPTM1-201ENST00000337392 ZNF654Q8IZM8 581 aa26.83■■□□□ 1.89
CLPTM1-201ENST00000337392 CNBD1Q8NA66 436 aa26.83■■□□□ 1.89
CLPTM1-201ENST00000337392 SHISA4Q96DD7 197 aa26.83■■□□□ 1.89
CLPTM1-201ENST00000337392 TRIM37O94972 964 aa26.83■■□□□ 1.88
CLPTM1-201ENST00000337392 FMR1NBQ8N0W7 255 aaPredicted RBP26.83■■□□□ 1.88
CLPTM1-201ENST00000337392 ENAHQ8N8S7 591 aaPredicted RBP26.83■■□□□ 1.88
CLPTM1-201ENST00000337392 MRPS27Q92552 414 aaKnown RBP26.83■■□□□ 1.88
CLPTM1-201ENST00000337392 THSD7AQ9UPZ6 1657 aa26.82■■□□□ 1.88
CLPTM1-201ENST00000337392 SSRP1Q08945 709 aaKnown RBP26.82■■□□□ 1.88
CLPTM1-201ENST00000337392 OXER1Q8TDS5 423 aa26.82■■□□□ 1.88
CLPTM1-201ENST00000337392 ERICH2A1L162 156 aa26.82■■□□□ 1.88
CLPTM1-201ENST00000337392 HS1BP3Q53T59 392 aa26.82■■□□□ 1.88
CLPTM1-201ENST00000337392 NRBP1Q9UHY1 535 aa26.82■■□□□ 1.88
CLPTM1-201ENST00000337392 ADALQ6DHV7 355 aa26.81■■□□□ 1.88
CLPTM1-201ENST00000337392 PRR5LQ6MZQ0 368 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms