RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 PRIMPOLQ96LW4 560 aa11.21□□□□□ -0.62
MSL3-202ENST00000337339 XPO4Q9C0E2 1151 aaKnown RBP11.21□□□□□ -0.62
MSL3-202ENST00000337339 RIC1Q4ADV7 1423 aa11.21□□□□□ -0.62
MSL3-202ENST00000337339 CAVIN2O95810 425 aa11.21□□□□□ -0.62
MSL3-202ENST00000337339 ZNF827Q17R98 1081 aa11.21□□□□□ -0.62
MSL3-202ENST00000337339 OLFM4Q6UX06 510 aa11.21□□□□□ -0.62
MSL3-202ENST00000337339 DHX40Q8IX18 779 aaKnown RBP11.21□□□□□ -0.62
MSL3-202ENST00000337339 ARFGEF2Q9Y6D5 1785 aa11.2□□□□□ -0.62
MSL3-202ENST00000337339 SIPA1L3O60292 1781 aaPredicted RBP11.2□□□□□ -0.62
MSL3-202ENST00000337339 ATP1A3P13637 1013 aa11.2□□□□□ -0.62
MSL3-202ENST00000337339 ARID4AP29374 1257 aaPredicted RBP11.2□□□□□ -0.62
MSL3-202ENST00000337339 KLHL10Q6JEL2 608 aa11.2□□□□□ -0.62
MSL3-202ENST00000337339 RBM43Q6ZSC3 357 aaKnown RBP11.2□□□□□ -0.62
MSL3-202ENST00000337339 HOMER1Q86YM7 354 aa11.2□□□□□ -0.62
MSL3-202ENST00000337339 LRRC8AQ8IWT6 810 aa11.2□□□□□ -0.62
MSL3-202ENST00000337339 PRDM10Q9NQV6 1147 aa11.2□□□□□ -0.62
MSL3-202ENST00000337339 VPS54Q9P1Q0 977 aa11.2□□□□□ -0.62
MSL3-202ENST00000337339 USP27XA6NNY8 438 aa11.2□□□□□ -0.62
MSL3-202ENST00000337339 PPARAQ07869 468 aa11.2□□□□□ -0.62
MSL3-202ENST00000337339 SLC39A14Q15043 492 aa11.2□□□□□ -0.62
MSL3-202ENST00000337339 C3orf67Q6ZVT6 689 aa11.2□□□□□ -0.62
MSL3-202ENST00000337339 CCDC112Q8NEF3 446 aa11.2□□□□□ -0.62
MSL3-202ENST00000337339 CNNM2Q9H8M5 875 aa11.2□□□□□ -0.62
MSL3-202ENST00000337339 AATFQ9NY61 560 aaKnown RBP eCLIP11.2□□□□□ -0.62
MSL3-202ENST00000337339 BCL9O00512 1426 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 SPDYE4A6NLX3 237 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 FOXN1O15353 648 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 GOLGA8FQ08AF8 430 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 GOLGA8DPQ0D2H9 430 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 ADGRA1Q86SQ6 560 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 NBPF5PQ86XG9 351 aaPredicted RBP11.19□□□□□ -0.62
MSL3-202ENST00000337339 GRAMD1CQ8IYS0 662 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 SRP68Q9UHB9 627 aaKnown RBP11.19□□□□□ -0.62
MSL3-202ENST00000337339 V9GY48 417 aaPredicted RBP11.19□□□□□ -0.62
MSL3-202ENST00000337339 LMTK3Q96Q04 1460 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 TCRBV5S4A2TA0A5A2 114 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 POLR2DO15514 142 aaKnown RBP11.19□□□□□ -0.62
MSL3-202ENST00000337339 NRDCO43847 1150 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 AFMP43652 599 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 NAA30Q147X3 362 aaPredicted RBP11.19□□□□□ -0.62
MSL3-202ENST00000337339 PTPN14Q15678 1187 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 LONRF3Q496Y0 759 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 PARP10Q53GL7 1025 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 FAM47AQ5JRC9 791 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 CELF1Q92879 486 aaKnown RBP11.19□□□□□ -0.62
MSL3-202ENST00000337339 KCNH3Q9ULD8 1083 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 COL18A1P39060 1754 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 MROH7-TTC4A0A0A0MT08 1334 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 A0A1W2PQ27 194 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 A0A1W2PQ64 194 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 A0A1W2PQD8 194 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 CAMTA2O94983 1202 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 SFPQP23246 707 aaKnown RBP eCLIP11.19□□□□□ -0.62
MSL3-202ENST00000337339 CMA1P23946 247 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 TERF1P54274 439 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 ZNF654Q8IZM8 581 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 ESR2Q92731 530 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 STAMQ92783 540 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.19□□□□□ -0.62
MSL3-202ENST00000337339 TMX1Q9H3N1 280 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 STRCP1A6NGW2 1772 aa11.19□□□□□ -0.62
MSL3-202ENST00000337339 TNKSO95271 1327 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 USP17L12C9JPN9 530 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 USP17L21D6R901 530 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 FGFR2P21802 821 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 EVCP57679 992 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 CBX1P83916 185 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 GRIN1Q05586 938 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 IFIT1BQ5T764 474 aaKnown RBP11.18□□□□□ -0.62
MSL3-202ENST00000337339 SHC4Q6S5L8 630 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 PTF1AQ7RTS3 328 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 OXER1Q8TDS5 423 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 RNF41Q9H4P4 317 aaPredicted RBP11.18□□□□□ -0.62
MSL3-202ENST00000337339 BCL2L12Q9HB09 334 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 CRYBG1Q9Y4K1 1723 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 CEP135Q66GS9 1140 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 NOSTRINQ8IVI9 506 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 FANCBQ8NB91 859 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 RASSF8Q8NHQ8 419 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 WASF1Q92558 559 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 DNAJC5Q9H3Z4 198 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 SPTLC3Q9NUV7 552 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 TACC3Q9Y6A5 838 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 TNS2Q63HR2 1409 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 CCDC196A0A1B0GTZ2 297 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 GNPATO15228 680 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 ZPR1O75312 459 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 KLRK1P26718 216 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 UBASH3AP57075 661 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 AXDND1Q5T1B0 1012 aaPredicted RBP11.18□□□□□ -0.62
MSL3-202ENST00000337339 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.18□□□□□ -0.62
MSL3-202ENST00000337339 IQCA1Q86XH1 822 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 TRMT44Q8IYL2 757 aaKnown RBP11.18□□□□□ -0.62
MSL3-202ENST00000337339 ANKIB1Q9P2G1 1089 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 PCDHB6Q9Y5E3 794 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 PCDHA5Q9Y5H7 936 aa11.18□□□□□ -0.62
MSL3-202ENST00000337339 SMTNL1A8MU46 457 aa11.17□□□□□ -0.62
MSL3-202ENST00000337339 NMT2O60551 498 aa11.17□□□□□ -0.62
MSL3-202ENST00000337339 EVX2Q03828 476 aa11.17□□□□□ -0.62
MSL3-202ENST00000337339 KRI1Q8N9T8 703 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms