RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 HEATR3Q7Z4Q2 680 aa9.42□□□□□ -0.9
HPS4-201ENST00000336873 ZSCAN29Q8IWY8 852 aaPredicted RBP9.42□□□□□ -0.9
HPS4-201ENST00000336873 AMOTL1Q8IY63 956 aa9.42□□□□□ -0.9
HPS4-201ENST00000336873 ZNF710Q8N1W2 664 aa9.42□□□□□ -0.9
HPS4-201ENST00000336873 PSMB7Q99436 277 aa9.42□□□□□ -0.9
HPS4-201ENST00000336873 ARGLU1Q9NWB6 273 aaPredicted RBP9.42□□□□□ -0.9
HPS4-201ENST00000336873 RHOXF2BP0C7M4 288 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 TTF1Q15361 905 aaPredicted RBP9.41□□□□□ -0.9
HPS4-201ENST00000336873 ADALQ6DHV7 355 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 APOA5Q6Q788 366 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 NBPF5PQ86XG9 351 aaPredicted RBP9.41□□□□□ -0.9
HPS4-201ENST00000336873 LCORLQ8N3X6 602 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 LINC00301Q8NCQ3 95 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 CCDC102AQ96A19 550 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 RHOXF2Q9BQY4 288 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 RABEP2Q9H5N1 569 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 PEAK1Q9H792 1746 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 TECPR2O15040 1411 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 C6orf229H3BNL8 230 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 NMT2O60551 498 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 PDE8BO95263 885 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 CTSWP56202 376 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 FAM98CQ17RN3 349 aaKnown RBP9.41□□□□□ -0.9
HPS4-201ENST00000336873 ANKRD18AQ8IVF6 992 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 TTLL11Q8NHH1 800 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 PXDNQ92626 1479 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 SH3TC1Q8TE82 1336 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 ADGRL3Q9HAR2 1447 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 MAGEB6P1A0A0J9YX57 407 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 TMEM232C9JQI7 657 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 UBAP1LF5GYI3 381 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 H7C1W4 665 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 ZPR1O75312 459 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 RAD51AP2Q09MP3 1159 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 CCDC152Q4G0S7 254 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 TMCO3Q6UWJ1 677 aa9.41□□□□□ -0.9
HPS4-201ENST00000336873 FAM205CA6NFA0 338 aa9.4□□□□□ -0.9
HPS4-201ENST00000336873 CASQ1P31415 396 aa9.4□□□□□ -0.9
HPS4-201ENST00000336873 MYL5Q02045 173 aa9.4□□□□□ -0.9
HPS4-201ENST00000336873 RASGRF1Q13972 1273 aa9.4□□□□□ -0.9
HPS4-201ENST00000336873 ZBTB38Q8NAP3 1195 aaPredicted RBP9.4□□□□□ -0.9
HPS4-201ENST00000336873 GPKOWQ92917 476 aaPredicted RBP eCLIP9.4□□□□□ -0.9
HPS4-201ENST00000336873 CAPZA3Q96KX2 299 aa9.4□□□□□ -0.9
HPS4-201ENST00000336873 LMTK3Q96Q04 1460 aa9.4□□□□□ -0.9
HPS4-201ENST00000336873 RIMBP2O15034 1052 aa9.4□□□□□ -0.9
HPS4-201ENST00000336873 USP49Q70CQ1 688 aa9.4□□□□□ -0.9
HPS4-201ENST00000336873 KRI1Q8N9T8 703 aaKnown RBP9.4□□□□□ -0.9
HPS4-201ENST00000336873 IPO4Q8TEX9 1081 aaKnown RBP9.4□□□□□ -0.9
HPS4-201ENST00000336873 ESR2Q92731 530 aa9.4□□□□□ -0.9
HPS4-201ENST00000336873 REREQ9P2R6 1566 aa9.4□□□□□ -0.91
HPS4-201ENST00000336873 TOM1O60784 492 aa9.4□□□□□ -0.91
HPS4-201ENST00000336873 WDHD1O75717 1129 aaPredicted RBP9.4□□□□□ -0.91
HPS4-201ENST00000336873 SLU7O95391 586 aaKnown RBP9.4□□□□□ -0.91
HPS4-201ENST00000336873 FDPSP14324 419 aaKnown RBP9.4□□□□□ -0.91
HPS4-201ENST00000336873 RFX5P48382 616 aaPredicted RBP9.4□□□□□ -0.91
HPS4-201ENST00000336873 ARID5AQ03989 594 aa9.4□□□□□ -0.91
HPS4-201ENST00000336873 GRIN1Q05586 938 aa9.4□□□□□ -0.91
HPS4-201ENST00000336873 NLRP10Q86W26 655 aa9.4□□□□□ -0.91
HPS4-201ENST00000336873 ZNF444Q8N0Y2 327 aaPredicted RBP9.4□□□□□ -0.91
HPS4-201ENST00000336873 OXER1Q8TDS5 423 aa9.4□□□□□ -0.91
HPS4-201ENST00000336873 EPSTI1Q96J88 318 aa9.4□□□□□ -0.91
HPS4-201ENST00000336873 RCOR1Q9UKL0 485 aa9.4□□□□□ -0.91
HPS4-201ENST00000336873 PCDHB6Q9Y5E3 794 aa9.4□□□□□ -0.91
HPS4-201ENST00000336873 CCDC196A0A1B0GTZ2 297 aa9.39□□□□□ -0.91
HPS4-201ENST00000336873 CCDC194A0A1B0GVG4 234 aa9.39□□□□□ -0.91
HPS4-201ENST00000336873 TRIM75PA6NK02 468 aa9.39□□□□□ -0.91
HPS4-201ENST00000336873 CBFA2T2O43439 604 aa9.39□□□□□ -0.91
HPS4-201ENST00000336873 PDE8AO60658 829 aa9.39□□□□□ -0.91
HPS4-201ENST00000336873 TXLNAP40222 546 aa9.39□□□□□ -0.91
HPS4-201ENST00000336873 PUM3Q15397 648 aaKnown RBP9.39□□□□□ -0.91
HPS4-201ENST00000336873 CCDC178Q5BJE1 867 aa9.39□□□□□ -0.91
HPS4-201ENST00000336873 CDK5RAP3Q96JB5 506 aa9.39□□□□□ -0.91
HPS4-201ENST00000336873 ST7Q9NRC1 585 aa9.39□□□□□ -0.91
HPS4-201ENST00000336873 SAMSN1Q9NSI8 373 aaKnown RBP9.39□□□□□ -0.91
HPS4-201ENST00000336873 GUCA1BQ9UMX6 200 aa9.39□□□□□ -0.91
HPS4-201ENST00000336873 KCNQ2O43526 872 aa9.39□□□□□ -0.91
HPS4-201ENST00000336873 UBA7P41226 1012 aa9.39□□□□□ -0.91
HPS4-201ENST00000336873 GSDMDP57764 484 aa9.39□□□□□ -0.91
HPS4-201ENST00000336873 KIF23Q02241 960 aaPredicted RBP9.39□□□□□ -0.91
HPS4-201ENST00000336873 PTPROQ16827 1216 aa9.39□□□□□ -0.91
HPS4-201ENST00000336873 DPF2Q92785 391 aa9.39□□□□□ -0.91
HPS4-201ENST00000336873 ZNF274Q96GC6 653 aaPredicted RBP9.39□□□□□ -0.91
HPS4-201ENST00000336873 LLPHQ9BRT6 129 aaKnown RBP9.39□□□□□ -0.91
HPS4-201ENST00000336873 IRX2Q9BZI1 471 aaPredicted RBP9.39□□□□□ -0.91
HPS4-201ENST00000336873 CEMIPQ8WUJ3 1361 aa9.39□□□□□ -0.91
HPS4-201ENST00000336873 RGPD1P0DJD0 1748 aa9.39□□□□□ -0.91
HPS4-201ENST00000336873 NEDD4P46934 1319 aa9.39□□□□□ -0.91
HPS4-201ENST00000336873 NOM1Q5C9Z4 860 aaKnown RBP9.39□□□□□ -0.91
HPS4-201ENST00000336873 GIGYF2Q6Y7W6 1299 aaKnown RBP9.39□□□□□ -0.91
HPS4-201ENST00000336873 BRINP3Q76B58 766 aa9.39□□□□□ -0.91
HPS4-201ENST00000336873 CENPHQ9H3R5 247 aa9.39□□□□□ -0.91
HPS4-201ENST00000336873 DEF6Q9H4E7 631 aa9.39□□□□□ -0.91
HPS4-201ENST00000336873 PAXBP1Q9Y5B6 917 aa9.39□□□□□ -0.91
HPS4-201ENST00000336873 HEG1Q9ULI3 1381 aa9.38□□□□□ -0.91
HPS4-201ENST00000336873 TNKSO95271 1327 aa9.38□□□□□ -0.91
HPS4-201ENST00000336873 SEC31AO94979 1220 aaKnown RBP9.38□□□□□ -0.91
HPS4-201ENST00000336873 UQCRFS1P1P0C7P4 283 aa9.38□□□□□ -0.91
HPS4-201ENST00000336873 AKNAD1Q5T1N1 836 aa9.38□□□□□ -0.91
HPS4-201ENST00000336873 SUSD4Q5VX71 490 aa9.38□□□□□ -0.91
HPS4-201ENST00000336873 LPIN2Q92539 896 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms