RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 KDM4FA0A1W2PPD8 638 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 USP17L12C9JPN9 530 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 USP17L21D6R901 530 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 PRKAB2O43741 272 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 CTSWP56202 376 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 UBASH3AP57075 661 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 CHMP4BP1P59074 171 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 TRAPPC3LQ5T215 181 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 SMARCE1Q969G3 411 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 USP28Q96RU2 1077 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 KRT23Q9C075 422 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 PUS7LQ9H0K6 701 aaKnown RBP7.39□□□□□ -1.23
HMG20A-201ENST00000336216 HELLSQ9NRZ9 838 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 KIF2AO00139 706 aaPredicted RBP7.39□□□□□ -1.23
HMG20A-201ENST00000336216 GSDMDP57764 484 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 STIM1Q13586 685 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 TERF2Q15554 542 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 MSL1Q68DK7 614 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 KRBA2Q6ZNG9 492 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 ZBTB38Q8NAP3 1195 aaPredicted RBP7.39□□□□□ -1.23
HMG20A-201ENST00000336216 LPIN2Q92539 896 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 SMARCC1Q92922 1105 aaPredicted RBP7.39□□□□□ -1.23
HMG20A-201ENST00000336216 AIFM3Q96NN9 605 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 XPO4Q9C0E2 1151 aaKnown RBP7.39□□□□□ -1.23
HMG20A-201ENST00000336216 ZSWIM6Q9HCJ5 1215 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 DDX41Q9UJV9 622 aaKnown RBP7.39□□□□□ -1.23
HMG20A-201ENST00000336216 CEP131Q9UPN4 1083 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 NWD1Q149M9 1564 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 VWA3AA6NCI4 1184 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 PDIA4P13667 645 aaKnown RBP7.39□□□□□ -1.23
HMG20A-201ENST00000336216 HIBADHP31937 336 aaKnown RBP7.39□□□□□ -1.23
HMG20A-201ENST00000336216 GYS2P54840 703 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 USPL1Q5W0Q7 1092 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 HAUS7Q99871 368 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 ZCCHC17Q9NP64 241 aaKnown RBP7.39□□□□□ -1.23
HMG20A-201ENST00000336216 CWC15Q9P013 229 aaKnown RBP7.39□□□□□ -1.23
HMG20A-201ENST00000336216 ATP10DQ9P241 1426 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 TCHHQ07283 1943 aa7.39□□□□□ -1.23
HMG20A-201ENST00000336216 NBPF26B4DH59 902 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 CTAGE5O15320 804 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 KCNQ2O43526 872 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 LDHBP07195 334 aaKnown RBP7.38□□□□□ -1.23
HMG20A-201ENST00000336216 PDE6AP16499 860 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 IBSPP21815 317 aaPredicted RBP7.38□□□□□ -1.23
HMG20A-201ENST00000336216 CASQ1P31415 396 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 CRKLP46109 303 aaKnown RBP7.38□□□□□ -1.23
HMG20A-201ENST00000336216 EVCP57679 992 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 NBPF14Q5TI25 921 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 NBPF10Q6P3W6 841 aaKnown RBP7.38□□□□□ -1.23
HMG20A-201ENST00000336216 GIGYF2Q6Y7W6 1299 aaKnown RBP7.38□□□□□ -1.23
HMG20A-201ENST00000336216 DHX37Q8IY37 1157 aaKnown RBP7.38□□□□□ -1.23
HMG20A-201ENST00000336216 DIS3L2Q8IYB7 885 aaKnown RBP7.38□□□□□ -1.23
HMG20A-201ENST00000336216 NBPF15Q8N660 670 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 CNBD1Q8NA66 436 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 KCNG4Q8TDN1 519 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 PUF60Q9UHX1 559 aaKnown RBP7.38□□□□□ -1.23
HMG20A-201ENST00000336216 CYP2D7A0A087X1C5 515 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 EPB41L2O43491 1005 aaKnown RBP7.38□□□□□ -1.23
HMG20A-201ENST00000336216 UFL1O94874 794 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 SCRN1Q12765 414 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 TCP10Q12799 353 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 SPTY2D1Q68D10 685 aaPredicted RBP7.38□□□□□ -1.23
HMG20A-201ENST00000336216 MAPKAPK5Q8IW41 473 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 CCDC12Q8WUD4 166 aaPredicted RBP7.38□□□□□ -1.23
HMG20A-201ENST00000336216 PGBD1Q96JS3 809 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 TTC14Q96N46 770 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 GPR101Q96P66 508 aaPredicted RBP7.38□□□□□ -1.23
HMG20A-201ENST00000336216 SEPT11Q9NVA2 429 aaKnown RBP7.38□□□□□ -1.23
HMG20A-201ENST00000336216 VPS54Q9P1Q0 977 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 WDR17Q8IZU2 1322 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 PDE8BO95263 885 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 RPS8P62241 208 aaKnown RBP7.38□□□□□ -1.23
HMG20A-201ENST00000336216 NALCNQ8IZF0 1738 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 NUP88Q99567 741 aaPredicted RBP7.38□□□□□ -1.23
HMG20A-201ENST00000336216 ZNHIT6Q9NWK9 470 aaKnown RBP7.38□□□□□ -1.23
HMG20A-201ENST00000336216 DACH1Q9UI36 760 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 USP21Q9UK80 565 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 TAF6LQ9Y6J9 622 aa7.38□□□□□ -1.23
HMG20A-201ENST00000336216 TRIM75PA6NK02 468 aa7.37□□□□□ -1.23
HMG20A-201ENST00000336216 N4BP3O15049 544 aa7.37□□□□□ -1.23
HMG20A-201ENST00000336216 LDHCP07864 332 aa7.37□□□□□ -1.23
HMG20A-201ENST00000336216 KRT40Q6A162 431 aa7.37□□□□□ -1.23
HMG20A-201ENST00000336216 TMEM87AQ8NBN3 555 aa7.37□□□□□ -1.23
HMG20A-201ENST00000336216 ANKRD7Q92527 254 aa7.37□□□□□ -1.23
HMG20A-201ENST00000336216 CARD10Q9BWT7 1032 aa7.37□□□□□ -1.23
HMG20A-201ENST00000336216 CNNM2Q9H8M5 875 aa7.37□□□□□ -1.23
HMG20A-201ENST00000336216 ZNF287Q9HBT7 754 aa7.37□□□□□ -1.23
HMG20A-201ENST00000336216 BMP2KQ9NSY1 1161 aaPredicted RBP7.37□□□□□ -1.23
HMG20A-201ENST00000336216 SRP68Q9UHB9 627 aaKnown RBP7.37□□□□□ -1.23
HMG20A-201ENST00000336216 KIF1AQ12756 1690 aa7.37□□□□□ -1.23
HMG20A-201ENST00000336216 POLR2DO15514 142 aaKnown RBP7.37□□□□□ -1.23
HMG20A-201ENST00000336216 KIF5BP33176 963 aa7.37□□□□□ -1.23
HMG20A-201ENST00000336216 POLA2Q14181 598 aa7.37□□□□□ -1.23
HMG20A-201ENST00000336216 KIF4BQ2VIQ3 1234 aa7.37□□□□□ -1.23
HMG20A-201ENST00000336216 CCDC178Q5BJE1 867 aa7.37□□□□□ -1.23
HMG20A-201ENST00000336216 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.37□□□□□ -1.23
HMG20A-201ENST00000336216 TDRD7Q8NHU6 1098 aaKnown RBP7.37□□□□□ -1.23
HMG20A-201ENST00000336216 CLIC6Q96NY7 704 aa7.37□□□□□ -1.23
HMG20A-201ENST00000336216 LZTFL1Q9NQ48 299 aa7.37□□□□□ -1.23
HMG20A-201ENST00000336216 TMOD2Q9NZR1 351 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms