RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 ZKSCAN3Q9BRR0 538 aa20.51■□□□□ 0.87
LRCH3-201ENST00000334859 FAM217BQ9NTX9 383 aaPredicted RBP20.51■□□□□ 0.87
LRCH3-201ENST00000334859 TACC3Q9Y6A5 838 aa20.51■□□□□ 0.87
LRCH3-201ENST00000334859 SSRP1Q08945 709 aaKnown RBP20.5■□□□□ 0.87
LRCH3-201ENST00000334859 SART3Q15020 963 aaKnown RBP20.5■□□□□ 0.87
LRCH3-201ENST00000334859 FILIP1Q7Z7B0 1213 aa20.5■□□□□ 0.87
LRCH3-201ENST00000334859 JMYQ8N9B5 988 aa20.5■□□□□ 0.87
LRCH3-201ENST00000334859 C16orf45Q96MC5 204 aaPredicted RBP20.5■□□□□ 0.87
LRCH3-201ENST00000334859 RTL9Q8NET4 1388 aa20.5■□□□□ 0.87
LRCH3-201ENST00000334859 MAP7D2Q96T17 732 aa20.5■□□□□ 0.87
LRCH3-201ENST00000334859 PNPLA7Q6ZV29 1317 aa20.49■□□□□ 0.87
LRCH3-201ENST00000334859 LAMB2P55268 1798 aa20.49■□□□□ 0.87
LRCH3-201ENST00000334859 GTF2F1P35269 517 aaKnown RBP eCLIP20.48■□□□□ 0.87
LRCH3-201ENST00000334859 SYKP43405 635 aa20.48■□□□□ 0.87
LRCH3-201ENST00000334859 ARID5BQ14865 1188 aa20.48■□□□□ 0.87
LRCH3-201ENST00000334859 ABCF2Q9UG63 623 aa20.48■□□□□ 0.87
LRCH3-201ENST00000334859 ZNF652Q9Y2D9 606 aa20.48■□□□□ 0.87
LRCH3-201ENST00000334859 THRAP3Q9Y2W1 955 aaKnown RBP20.48■□□□□ 0.87
LRCH3-201ENST00000334859 STK36Q9NRP7 1315 aa20.48■□□□□ 0.87
LRCH3-201ENST00000334859 ERICH2A1L162 156 aa20.48■□□□□ 0.87
LRCH3-201ENST00000334859 WTAPQ15007 396 aa20.48■□□□□ 0.87
LRCH3-201ENST00000334859 LRRC8AQ8IWT6 810 aa20.48■□□□□ 0.87
LRCH3-201ENST00000334859 STAG1Q8WVM7 1258 aa20.48■□□□□ 0.87
LRCH3-201ENST00000334859 CDC5LQ99459 802 aaKnown RBP20.48■□□□□ 0.87
LRCH3-201ENST00000334859 RREB1Q92766 1687 aa20.48■□□□□ 0.87
LRCH3-201ENST00000334859 FMNL1O95466 1100 aaPredicted RBP20.47■□□□□ 0.87
LRCH3-201ENST00000334859 CYP7A1P22680 504 aa20.47■□□□□ 0.87
LRCH3-201ENST00000334859 U2AF2P26368 475 aaKnown RBP eCLIP20.47■□□□□ 0.872e-7■■■■□ 23.5
LRCH3-201ENST00000334859 NRAPQ86VF7 1730 aa20.47■□□□□ 0.87
LRCH3-201ENST00000334859 PPP6R2O75170 966 aa20.47■□□□□ 0.87
LRCH3-201ENST00000334859 PTPAQ15257 358 aa20.47■□□□□ 0.87
LRCH3-201ENST00000334859 RTN1Q16799 776 aa20.47■□□□□ 0.87
LRCH3-201ENST00000334859 GLIPR1L2Q4G1C9 344 aa20.47■□□□□ 0.87
LRCH3-201ENST00000334859 TRIM22Q8IYM9 498 aa20.47■□□□□ 0.87
LRCH3-201ENST00000334859 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.47■□□□□ 0.87
LRCH3-201ENST00000334859 COL4A1P02462 1669 aa20.46■□□□□ 0.87
LRCH3-201ENST00000334859 BCORQ6W2J9 1755 aa20.46■□□□□ 0.87
LRCH3-201ENST00000334859 RIOK3O14730 519 aaKnown RBP20.46■□□□□ 0.87
LRCH3-201ENST00000334859 IFNAR1P17181 557 aa20.46■□□□□ 0.87
LRCH3-201ENST00000334859 NLRP12P59046 1061 aa20.46■□□□□ 0.87
LRCH3-201ENST00000334859 CCDC82Q8N4S0 544 aa20.46■□□□□ 0.87
LRCH3-201ENST00000334859 WASF1Q92558 559 aa20.46■□□□□ 0.87
LRCH3-201ENST00000334859 MAP3K14Q99558 947 aa20.46■□□□□ 0.87
LRCH3-201ENST00000334859 RAI14Q9P0K7 980 aa20.46■□□□□ 0.87
LRCH3-201ENST00000334859 NEMFO60524 1076 aa20.46■□□□□ 0.87
LRCH3-201ENST00000334859 SHC4Q6S5L8 630 aa20.46■□□□□ 0.87
LRCH3-201ENST00000334859 MTERF4Q7Z6M4 381 aaKnown RBP20.46■□□□□ 0.87
LRCH3-201ENST00000334859 CLIC6Q96NY7 704 aa20.46■□□□□ 0.87
LRCH3-201ENST00000334859 BPIFA3Q9BQP9 254 aa20.46■□□□□ 0.87
LRCH3-201ENST00000334859 RNF41Q9H4P4 317 aaPredicted RBP20.46■□□□□ 0.87
LRCH3-201ENST00000334859 BCL9LQ86UU0 1499 aa20.45■□□□□ 0.86
LRCH3-201ENST00000334859 SMC2O95347 1197 aa20.45■□□□□ 0.86
LRCH3-201ENST00000334859 GUCY1A2P33402 732 aa20.45■□□□□ 0.86
LRCH3-201ENST00000334859 GYG1P46976 350 aa20.45■□□□□ 0.86
LRCH3-201ENST00000334859 SAFBQ15424 915 aaKnown RBP eCLIP20.45■□□□□ 0.86
LRCH3-201ENST00000334859 TPD52L1Q16890 204 aaPredicted RBP20.45■□□□□ 0.86
LRCH3-201ENST00000334859 ISM2Q6H9L7 571 aa20.45■□□□□ 0.86
LRCH3-201ENST00000334859 ADGRA1Q86SQ6 560 aa20.45■□□□□ 0.86
LRCH3-201ENST00000334859 SDR42E1Q8WUS8 393 aa20.45■□□□□ 0.86
LRCH3-201ENST00000334859 UBAC1Q9BSL1 405 aa20.45■□□□□ 0.86
LRCH3-201ENST00000334859 NUTM2BA6NNL0 878 aaPredicted RBP20.44■□□□□ 0.86
LRCH3-201ENST00000334859 MINDY4BA8MYZ0 360 aa20.44■□□□□ 0.86
LRCH3-201ENST00000334859 NUTM2EB1AL46 878 aaPredicted RBP20.44■□□□□ 0.86
LRCH3-201ENST00000334859 TPM4P67936 248 aa20.44■□□□□ 0.86
LRCH3-201ENST00000334859 RBM6P78332 1123 aaKnown RBP20.44■□□□□ 0.86
LRCH3-201ENST00000334859 PPARAQ07869 468 aa20.44■□□□□ 0.86
LRCH3-201ENST00000334859 NUTM2AQ8IVF1 878 aaPredicted RBP20.44■□□□□ 0.86
LRCH3-201ENST00000334859 NOSTRINQ8IVI9 506 aa20.44■□□□□ 0.86
LRCH3-201ENST00000334859 NUP133Q8WUM0 1156 aa20.44■□□□□ 0.86
LRCH3-201ENST00000334859 ARID3AQ99856 593 aa20.44■□□□□ 0.86
LRCH3-201ENST00000334859 SKILP12757 684 aa20.44■□□□□ 0.86
LRCH3-201ENST00000334859 ANKRD18AQ8IVF6 992 aa20.44■□□□□ 0.86
LRCH3-201ENST00000334859 CMTR1Q8N1G2 835 aaKnown RBP20.44■□□□□ 0.86
LRCH3-201ENST00000334859 TIGD1Q96MW7 591 aa20.44■□□□□ 0.86
LRCH3-201ENST00000334859 GNL3LQ9NVN8 582 aaKnown RBP20.44■□□□□ 0.86
LRCH3-201ENST00000334859 KCNJ14Q9UNX9 436 aa20.44■□□□□ 0.86
LRCH3-201ENST00000334859 HPSEQ9Y251 543 aa20.44■□□□□ 0.86
LRCH3-201ENST00000334859 NID2Q14112 1375 aa20.43■□□□□ 0.86
LRCH3-201ENST00000334859 MAGEB6P1A0A0J9YX57 407 aa20.43■□□□□ 0.86
LRCH3-201ENST00000334859 KCNQ2O43526 872 aa20.43■□□□□ 0.86
LRCH3-201ENST00000334859 ERFEQ4G0M1 354 aa20.43■□□□□ 0.86
LRCH3-201ENST00000334859 DIS3L2Q8IYB7 885 aaKnown RBP20.43■□□□□ 0.86
LRCH3-201ENST00000334859 BTBD18B2RXH4 712 aa20.43■□□□□ 0.86
LRCH3-201ENST00000334859 MMP1P03956 469 aa20.43■□□□□ 0.86
LRCH3-201ENST00000334859 TNNT1P13805 278 aa20.43■□□□□ 0.86
LRCH3-201ENST00000334859 RESP18Q5W5W9 173 aa20.43■□□□□ 0.86
LRCH3-201ENST00000334859 C3orf67Q6ZVT6 689 aa20.42■□□□□ 0.86
LRCH3-201ENST00000334859 ZNF654Q8IZM8 581 aa20.42■□□□□ 0.86
LRCH3-201ENST00000334859 SMARCC1Q92922 1105 aaPredicted RBP20.42■□□□□ 0.86
LRCH3-201ENST00000334859 IFNKQ9P0W0 207 aa20.42■□□□□ 0.86
LRCH3-201ENST00000334859 ZNF804BA4D1E1 1349 aa20.42■□□□□ 0.86
LRCH3-201ENST00000334859 SPATA31A5Q5VU36 1347 aa20.42■□□□□ 0.86
LRCH3-201ENST00000334859 SPATA31A7Q8IWB4 1347 aa20.42■□□□□ 0.86
LRCH3-201ENST00000334859 CCDC196A0A1B0GTZ2 297 aa20.42■□□□□ 0.86
LRCH3-201ENST00000334859 WTIPA6NIX2 430 aaPredicted RBP20.42■□□□□ 0.86
LRCH3-201ENST00000334859 CUTAO60888 179 aa20.42■□□□□ 0.86
LRCH3-201ENST00000334859 PNOCQ13519 176 aa20.42■□□□□ 0.86
LRCH3-201ENST00000334859 XPO4Q9C0E2 1151 aaKnown RBP20.42■□□□□ 0.86
LRCH3-201ENST00000334859 CICQ96RK0 1608 aaPredicted RBP20.42■□□□□ 0.86
LRCH3-201ENST00000334859 COL1A1P02452 1464 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms