RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 KIF3CO14782 793 aa20.96■□□□□ 0.95
CHGA-202ENST00000334654 SEC24BO95487 1268 aa20.96■□□□□ 0.95
CHGA-202ENST00000334654 SH3BP5LQ7L8J4 393 aa20.96■□□□□ 0.95
CHGA-202ENST00000334654 IFNL3Q8IZI9 196 aa20.96■□□□□ 0.95
CHGA-202ENST00000334654 TMOD2Q9NZR1 351 aa20.96■□□□□ 0.95
CHGA-202ENST00000334654 NAV1Q8NEY1 1877 aa20.96■□□□□ 0.95
CHGA-202ENST00000334654 RPAP1Q9BWH6 1393 aaPredicted RBP20.96■□□□□ 0.95
CHGA-202ENST00000334654 ENTPD3O75355 529 aa20.95■□□□□ 0.94
CHGA-202ENST00000334654 USP5P45974 858 aa20.95■□□□□ 0.94
CHGA-202ENST00000334654 TCP10Q12799 353 aa20.95■□□□□ 0.94
CHGA-202ENST00000334654 PICALMQ13492 652 aa20.95■□□□□ 0.94
CHGA-202ENST00000334654 ALX1Q15699 326 aa20.95■□□□□ 0.94
CHGA-202ENST00000334654 GIMAP6Q6P9H5 292 aa20.95■□□□□ 0.94
CHGA-202ENST00000334654 FAM83AQ86UY5 434 aa20.95■□□□□ 0.94
CHGA-202ENST00000334654 ZNF784Q8NCA9 323 aaPredicted RBP20.95■□□□□ 0.94
CHGA-202ENST00000334654 FAM151AQ8WW52 585 aa20.95■□□□□ 0.94
CHGA-202ENST00000334654 DSCC1Q9BVC3 393 aa20.95■□□□□ 0.94
CHGA-202ENST00000334654 OSBPL5Q9H0X9 879 aaPredicted RBP20.95■□□□□ 0.94
CHGA-202ENST00000334654 RASA3Q14644 834 aa20.94■□□□□ 0.94
CHGA-202ENST00000334654 MAP4K1Q92918 833 aa20.94■□□□□ 0.94
CHGA-202ENST00000334654 DDTLA6NHG4 134 aaPredicted RBP20.94■□□□□ 0.94
CHGA-202ENST00000334654 FGAP02671 866 aa20.94■□□□□ 0.94
CHGA-202ENST00000334654 EVX2Q03828 476 aa20.94■□□□□ 0.94
CHGA-202ENST00000334654 DLK2Q6UY11 383 aa20.94■□□□□ 0.94
CHGA-202ENST00000334654 LDHDQ86WU2 507 aa20.94■□□□□ 0.94
CHGA-202ENST00000334654 APOBEC3FQ8IUX4 373 aaKnown RBP20.94■□□□□ 0.94
CHGA-202ENST00000334654 CDAN1Q8IWY9 1227 aa20.94■□□□□ 0.94
CHGA-202ENST00000334654 DCPSQ96C86 337 aaKnown RBP20.94■□□□□ 0.94
CHGA-202ENST00000334654 TEPSINQ96N21 525 aa20.94■□□□□ 0.94
CHGA-202ENST00000334654 TMEM39BQ9GZU3 492 aa20.94■□□□□ 0.94
CHGA-202ENST00000334654 DEFB129Q9H1M3 183 aa20.94■□□□□ 0.94
CHGA-202ENST00000334654 SIPA1L1O43166 1804 aa20.93■□□□□ 0.94
CHGA-202ENST00000334654 SMIM22K7EJ46 135 aa20.93■□□□□ 0.94
CHGA-202ENST00000334654 CTR9Q6PD62 1173 aa20.93■□□□□ 0.94
CHGA-202ENST00000334654 COL2A1P02458 1487 aaPredicted RBP20.92■□□□□ 0.94
CHGA-202ENST00000334654 ATRNL1Q5VV63 1379 aa20.92■□□□□ 0.94
CHGA-202ENST00000334654 ZMYM6O95789 1325 aa20.92■□□□□ 0.94
CHGA-202ENST00000334654 APPP05067 770 aa20.92■□□□□ 0.94
CHGA-202ENST00000334654 TNFAIP1Q13829 316 aa20.92■□□□□ 0.94
CHGA-202ENST00000334654 MAP1SQ66K74 1059 aaPredicted RBP20.92■□□□□ 0.94
CHGA-202ENST00000334654 ANO2Q9NQ90 1003 aa20.92■□□□□ 0.94
CHGA-202ENST00000334654 SAP30BPQ9UHR5 308 aaKnown RBP20.92■□□□□ 0.94
CHGA-202ENST00000334654 PALD1Q9ULE6 856 aa20.92■□□□□ 0.94
CHGA-202ENST00000334654 CLEC11AQ9Y240 323 aa20.92■□□□□ 0.94
CHGA-202ENST00000334654 USP17L12C9JPN9 530 aa20.91■□□□□ 0.94
CHGA-202ENST00000334654 USP17L21D6R901 530 aa20.91■□□□□ 0.94
CHGA-202ENST00000334654 CYP2D6P10635 497 aa20.91■□□□□ 0.94
CHGA-202ENST00000334654 SBK1Q52WX2 424 aa20.91■□□□□ 0.94
CHGA-202ENST00000334654 KRT26Q7Z3Y9 468 aa20.91■□□□□ 0.94
CHGA-202ENST00000334654 MCM9Q9NXL9 1143 aa20.91■□□□□ 0.94
CHGA-202ENST00000334654 CYP2D7A0A087X1C5 515 aa20.9■□□□□ 0.94
CHGA-202ENST00000334654 ADM5C9JUS6 153 aa20.9■□□□□ 0.94
CHGA-202ENST00000334654 TNNI2P48788 182 aa20.9■□□□□ 0.94
CHGA-202ENST00000334654 PLCD1P51178 756 aa20.9■□□□□ 0.94
CHGA-202ENST00000334654 C12orf60Q5U649 245 aa20.9■□□□□ 0.94
CHGA-202ENST00000334654 PRAMEF18Q5VWM3 479 aa20.9■□□□□ 0.94
CHGA-202ENST00000334654 KIAA1211Q6ZU35 1233 aa20.9■□□□□ 0.94
CHGA-202ENST00000334654 USP48Q86UV5 1035 aa20.9■□□□□ 0.94
CHGA-202ENST00000334654 GLIS2Q9BZE0 524 aaPredicted RBP20.9■□□□□ 0.94
CHGA-202ENST00000334654 NACAP1Q9BZK3 213 aa20.9■□□□□ 0.94
CHGA-202ENST00000334654 LAMB1P07942 1786 aa20.89■□□□□ 0.94
CHGA-202ENST00000334654 TDO2P48775 406 aa20.89■□□□□ 0.94
CHGA-202ENST00000334654 CDC37L1Q7L3B6 337 aa20.89■□□□□ 0.94
CHGA-202ENST00000334654 SULF1Q8IWU6 871 aa20.89■□□□□ 0.94
CHGA-202ENST00000334654 USP26Q9BXU7 913 aa20.89■□□□□ 0.94
CHGA-202ENST00000334654 BACH2Q9BYV9 841 aa20.89■□□□□ 0.94
CHGA-202ENST00000334654 NAPBQ9H115 298 aa20.89■□□□□ 0.94
CHGA-202ENST00000334654 PPP2R3BQ9Y5P8 575 aa20.89■□□□□ 0.94
CHGA-202ENST00000334654 REC8O95072 547 aa20.88■□□□□ 0.93
CHGA-202ENST00000334654 SLURP2P0DP57 97 aa20.88■□□□□ 0.93
CHGA-202ENST00000334654 DHX36Q9H2U1 1008 aaKnown RBP20.88■□□□□ 0.93
CHGA-202ENST00000334654 RBM8AQ9Y5S9 174 aaKnown RBP20.88■□□□□ 0.93
CHGA-202ENST00000334654 LAMA4Q16363 1823 aa20.88■□□□□ 0.93
CHGA-202ENST00000334654 NECTIN1Q15223 517 aa20.88■□□□□ 0.93
CHGA-202ENST00000334654 SLC4A8Q2Y0W8 1093 aa20.88■□□□□ 0.93
CHGA-202ENST00000334654 NBPF12Q5TAG4 269 aaPredicted RBP20.88■□□□□ 0.93
CHGA-202ENST00000334654 CHADLQ6NUI6 762 aa20.88■□□□□ 0.93
CHGA-202ENST00000334654 METTL16Q86W50 562 aaKnown RBP20.88■□□□□ 0.93
CHGA-202ENST00000334654 DDRGK1Q96HY6 314 aa20.88■□□□□ 0.93
CHGA-202ENST00000334654 ARPP21Q9UBL0 812 aaPredicted RBP20.88■□□□□ 0.93
CHGA-202ENST00000334654 TACC3Q9Y6A5 838 aa20.88■□□□□ 0.93
CHGA-202ENST00000334654 U3KPZ7 1027 aaPredicted RBP20.88■□□□□ 0.93
CHGA-202ENST00000334654 SSC5DA1L4H1 1573 aa20.87■□□□□ 0.93
CHGA-202ENST00000334654 EPB41L2O43491 1005 aaKnown RBP20.87■□□□□ 0.93
CHGA-202ENST00000334654 ITGBL1O95965 494 aaPredicted RBP20.87■□□□□ 0.93
CHGA-202ENST00000334654 POLR3DP05423 398 aaPredicted RBP20.87■□□□□ 0.93
CHGA-202ENST00000334654 FMR1Q06787 632 aaKnown RBP eCLIP20.87■□□□□ 0.93
CHGA-202ENST00000334654 NBPF3Q9H094 633 aa20.87■□□□□ 0.93
CHGA-202ENST00000334654 ANAPC4Q9UJX5 808 aa20.87■□□□□ 0.93
CHGA-202ENST00000334654 MAP3K10Q02779 954 aa20.86■□□□□ 0.93
CHGA-202ENST00000334654 GABPAQ06546 454 aa20.86■□□□□ 0.93
CHGA-202ENST00000334654 TTC6Q86TZ1 520 aa20.86■□□□□ 0.93
CHGA-202ENST00000334654 ZSCAN29Q8IWY8 852 aaPredicted RBP20.86■□□□□ 0.93
CHGA-202ENST00000334654 CSRNP1Q96S65 589 aa20.86■□□□□ 0.93
CHGA-202ENST00000334654 PI4KBQ9UBF8 816 aa20.86■□□□□ 0.93
CHGA-202ENST00000334654 TAF6LQ9Y6J9 622 aa20.86■□□□□ 0.93
CHGA-202ENST00000334654 MINDY4BA8MYZ0 360 aa20.85■□□□□ 0.93
CHGA-202ENST00000334654 TRAF5O00463 557 aa20.85■□□□□ 0.93
CHGA-202ENST00000334654 CYP21A2P08686 494 aa20.85■□□□□ 0.93
CHGA-202ENST00000334654 PPARAQ07869 468 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms