RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 STX10O60499 249 aa15.71■□□□□ 0.11
SYNE3-201ENST00000334258 RXRAP19793 462 aa15.71■□□□□ 0.11
SYNE3-201ENST00000334258 TMED8Q6PL24 325 aaPredicted RBP15.71■□□□□ 0.11
SYNE3-201ENST00000334258 ALG1Q9BT22 464 aa15.71■□□□□ 0.11
SYNE3-201ENST00000334258 TUBE1Q9UJT0 475 aa15.71■□□□□ 0.11
SYNE3-201ENST00000334258 H3BQF6 201 aa15.7■□□□□ 0.1
SYNE3-201ENST00000334258 IL2RBP14784 551 aa15.7■□□□□ 0.1
SYNE3-201ENST00000334258 LONRF3Q496Y0 759 aa15.7■□□□□ 0.1
SYNE3-201ENST00000334258 HSP90AB3PQ58FF7 597 aa15.7■□□□□ 0.1
SYNE3-201ENST00000334258 SPECC1LQ69YQ0 1117 aa15.7■□□□□ 0.1
SYNE3-201ENST00000334258 TRMT44Q8IYL2 757 aaKnown RBP15.7■□□□□ 0.1
SYNE3-201ENST00000334258 UBXN6Q9BZV1 441 aa15.7■□□□□ 0.1
SYNE3-201ENST00000334258 NFE2L3Q9Y4A8 694 aa15.7■□□□□ 0.1
SYNE3-201ENST00000334258 CCDC151A5D8V7 595 aa15.7■□□□□ 0.1
SYNE3-201ENST00000334258 SHC4Q6S5L8 630 aa15.7■□□□□ 0.1
SYNE3-201ENST00000334258 RSRC2Q7L4I2 434 aaKnown RBP15.7■□□□□ 0.1
SYNE3-201ENST00000334258 VPS37DQ86XT2 251 aa15.7■□□□□ 0.1
SYNE3-201ENST00000334258 ACSBG1Q96GR2 724 aa15.7■□□□□ 0.1
SYNE3-201ENST00000334258 DCAF5Q96JK2 942 aa15.7■□□□□ 0.1
SYNE3-201ENST00000334258 WDR17Q8IZU2 1322 aa15.7■□□□□ 0.1
SYNE3-201ENST00000334258 PHACTR2O75167 634 aa15.7■□□□□ 0.1
SYNE3-201ENST00000334258 RRP15Q9Y3B9 282 aaKnown RBP15.7■□□□□ 0.1
SYNE3-201ENST00000334258 TRPM3Q9HCF6 1732 aaPredicted RBP15.7■□□□□ 0.1
SYNE3-201ENST00000334258 RFX7Q2KHR2 1363 aa15.7■□□□□ 0.1
SYNE3-201ENST00000334258 SLIT3O75094 1523 aa15.7■□□□□ 0.1
SYNE3-201ENST00000334258 CAMTA1Q9Y6Y1 1673 aa15.69■□□□□ 0.1
SYNE3-201ENST00000334258 M0R2C6 588 aa15.69■□□□□ 0.1
SYNE3-201ENST00000334258 ACTN2P35609 894 aa15.69■□□□□ 0.1
SYNE3-201ENST00000334258 KIF4BQ2VIQ3 1234 aa15.69■□□□□ 0.1
SYNE3-201ENST00000334258 CCDC102AQ96A19 550 aa15.69■□□□□ 0.1
SYNE3-201ENST00000334258 KCNH3Q9ULD8 1083 aa15.69■□□□□ 0.1
SYNE3-201ENST00000334258 ASAP1Q9ULH1 1129 aa15.69■□□□□ 0.1
SYNE3-201ENST00000334258 CCDC175P0C221 793 aa15.69■□□□□ 0.1
SYNE3-201ENST00000334258 PDE4BQ07343 736 aa15.69■□□□□ 0.1
SYNE3-201ENST00000334258 TRIM29Q14134 588 aa15.69■□□□□ 0.1
SYNE3-201ENST00000334258 MTF1Q14872 753 aa15.69■□□□□ 0.1
SYNE3-201ENST00000334258 BRD3Q15059 726 aa15.69■□□□□ 0.1
SYNE3-201ENST00000334258 ZNF827Q17R98 1081 aa15.69■□□□□ 0.1
SYNE3-201ENST00000334258 HSP90B2PQ58FF3 399 aa15.69■□□□□ 0.1
SYNE3-201ENST00000334258 TMEM139Q8IV31 216 aa15.69■□□□□ 0.1
SYNE3-201ENST00000334258 INTS13Q9NVM9 706 aa15.69■□□□□ 0.1
SYNE3-201ENST00000334258 HOOK1Q9UJC3 728 aaKnown RBP15.69■□□□□ 0.1
SYNE3-201ENST00000334258 KIF5CO60282 957 aa15.69■□□□□ 0.1
SYNE3-201ENST00000334258 EIF3JO75822 258 aaKnown RBP15.69■□□□□ 0.1
SYNE3-201ENST00000334258 TTLL7Q6ZT98 887 aa15.69■□□□□ 0.1
SYNE3-201ENST00000334258 GOLGA6L1Q8N7Z2 621 aa15.69■□□□□ 0.1
SYNE3-201ENST00000334258 OSBP2Q969R2 916 aa15.69■□□□□ 0.1
SYNE3-201ENST00000334258 FOXN1O15353 648 aa15.68■□□□□ 0.1
SYNE3-201ENST00000334258 ERLIN1O75477 346 aa15.68■□□□□ 0.1
SYNE3-201ENST00000334258 RHOXF2BP0C7M4 288 aa15.68■□□□□ 0.1
SYNE3-201ENST00000334258 TRDNQ13061 729 aa15.68■□□□□ 0.1
SYNE3-201ENST00000334258 SKIDA1Q1XH10 827 aa15.68■□□□□ 0.1
SYNE3-201ENST00000334258 WWC2Q6AWC2 1192 aa15.68■□□□□ 0.1
SYNE3-201ENST00000334258 CPLX2Q6PUV4 134 aaKnown RBP15.68■□□□□ 0.1
SYNE3-201ENST00000334258 TC2NQ8N9U0 490 aa15.68■□□□□ 0.1
SYNE3-201ENST00000334258 RHOXF2Q9BQY4 288 aa15.68■□□□□ 0.1
SYNE3-201ENST00000334258 HDXQ7Z353 690 aa15.68■□□□□ 0.1
SYNE3-201ENST00000334258 METTL16Q86W50 562 aaKnown RBP15.68■□□□□ 0.1
SYNE3-201ENST00000334258 FOXP4Q8IVH2 680 aaPredicted RBP15.68■□□□□ 0.1
SYNE3-201ENST00000334258 NCOA7Q8NI08 942 aa15.68■□□□□ 0.1
SYNE3-201ENST00000334258 TOMM22Q9NS69 142 aa15.68■□□□□ 0.1
SYNE3-201ENST00000334258 GEMIN8Q9NWZ8 242 aaKnown RBP15.68■□□□□ 0.1
SYNE3-201ENST00000334258 CDC27P30260 824 aa15.67■□□□□ 0.1
SYNE3-201ENST00000334258 KCNQ4P56696 695 aa15.67■□□□□ 0.1
SYNE3-201ENST00000334258 FAM182BQ5T319 152 aa15.67■□□□□ 0.1
SYNE3-201ENST00000334258 KRT40Q6A162 431 aa15.67■□□□□ 0.1
SYNE3-201ENST00000334258 PHKBQ93100 1093 aa15.67■□□□□ 0.1
SYNE3-201ENST00000334258 HPS5Q9UPZ3 1129 aa15.67■□□□□ 0.1
SYNE3-201ENST00000334258 ZNF213O14771 459 aa15.67■□□□□ 0.1
SYNE3-201ENST00000334258 FGAP02671 866 aa15.67■□□□□ 0.1
SYNE3-201ENST00000334258 NOM1Q5C9Z4 860 aaKnown RBP15.67■□□□□ 0.1
SYNE3-201ENST00000334258 KIFC2Q96AC6 838 aa15.67■□□□□ 0.1
SYNE3-201ENST00000334258 MRPL44Q9H9J2 332 aaKnown RBP15.67■□□□□ 0.1
SYNE3-201ENST00000334258 SOWAHDA6NJG2 315 aa15.67■□□□□ 0.1
SYNE3-201ENST00000334258 ATP2B1P20020 1258 aa15.67■□□□□ 0.1
SYNE3-201ENST00000334258 ZNF569Q5MCW4 686 aa15.67■□□□□ 0.1
SYNE3-201ENST00000334258 SRGAP1Q7Z6B7 1085 aa15.67■□□□□ 0.1
SYNE3-201ENST00000334258 SRLQ86TD4 932 aa15.67■□□□□ 0.1
SYNE3-201ENST00000334258 PPFIBP1Q86W92 1011 aa15.67■□□□□ 0.1
SYNE3-201ENST00000334258 SNRPA1P09661 255 aaKnown RBP15.66■□□□□ 0.1
SYNE3-201ENST00000334258 MICU3Q86XE3 530 aa15.66■□□□□ 0.1
SYNE3-201ENST00000334258 SUGCTQ9HAC7 445 aa15.66■□□□□ 0.1
SYNE3-201ENST00000334258 METAP2P50579 478 aaKnown RBP eCLIP15.66■□□□□ 0.1
SYNE3-201ENST00000334258 KLHL10Q6JEL2 608 aa15.66■□□□□ 0.1
SYNE3-201ENST00000334258 ZNF594Q96JF6 807 aaPredicted RBP15.66■□□□□ 0.1
SYNE3-201ENST00000334258 FAN1Q9Y2M0 1017 aa15.66■□□□□ 0.1
SYNE3-201ENST00000334258 N4BP1O75113 896 aaKnown RBP15.65■□□□□ 0.1
SYNE3-201ENST00000334258 IVLP07476 585 aa15.65■□□□□ 0.1
SYNE3-201ENST00000334258 GTF2A1P52655 376 aaPredicted RBP15.65■□□□□ 0.1
SYNE3-201ENST00000334258 NFXL1Q6ZNB6 911 aa15.65■□□□□ 0.1
SYNE3-201ENST00000334258 HPSEQ9Y251 543 aa15.65■□□□□ 0.1
SYNE3-201ENST00000334258 AKR1B15C9JRZ8 316 aaPredicted RBP15.65■□□□□ 0.1
SYNE3-201ENST00000334258 MYO1BO43795 1136 aa15.65■□□□□ 0.1
SYNE3-201ENST00000334258 CUTAO60888 179 aa15.65■□□□□ 0.1
SYNE3-201ENST00000334258 CEP112Q8N8E3 955 aa15.65■□□□□ 0.1
SYNE3-201ENST00000334258 GPATCH11Q8N954 259 aa15.65■□□□□ 0.1
SYNE3-201ENST00000334258 SAMSN1Q9NSI8 373 aaKnown RBP15.65■□□□□ 0.1
SYNE3-201ENST00000334258 RAI14Q9P0K7 980 aa15.65■□□□□ 0.1
SYNE3-201ENST00000334258 A0A1B0GUL7 405 aa15.65■□□□□ 0.1
SYNE3-201ENST00000334258 NBPF26B4DH59 902 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms