RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 SYNDIG1Q9H7V2 258 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 TCHHQ07283 1943 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 APOA1P02647 267 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 DSTYKQ6XUX3 929 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 GDAP1Q8TB36 358 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 RASSF5Q8WWW0 418 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 NLRP4Q96MN2 994 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 PAGR1Q9BTK6 254 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 EVPLQ92817 2033 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 HSPA1LP34931 641 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 KRT2P35908 639 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 SKIDA1Q1XH10 827 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 OGFOD1Q8N543 542 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 TMIEQ8NEW7 156 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 NUP155O75694 1391 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 ARPC4P59998 168 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 PDCLQ13371 301 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 RUNDC3AQ59EK9 446 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 AMOTL1Q8IY63 956 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 PHKBQ93100 1093 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 STRN4Q9NRL3 753 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 LRRIQ3A6PVS8 624 aaPredicted RBP6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 LSM1O15116 133 aaKnown RBP6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 ASPHQ12797 758 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 LAMC2Q13753 1193 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 NFXL1Q6ZNB6 911 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 ANKLE2Q86XL3 938 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 PSMA8Q8TAA3 256 aa6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 SYTL4Q96C24 671 aaPredicted RBP6.76□□□□□ -1.33
CDC42BPA-201ENST00000334218 APBB1IPQ7Z5R6 666 aaPredicted RBP6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 CCDC77Q9BR77 488 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 IDH3BO43837 385 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 PHEXP78562 749 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 NAF1Q96HR8 494 aaKnown RBP6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 MYOM3Q5VTT5 1437 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 MMS22LQ6ZRQ5 1243 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 MPNDQ8N594 471 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 PNISRQ8TF01 805 aaKnown RBP6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 MED4Q9NPJ6 270 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 SLC52A1Q9NWF4 448 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 EIF3CLB5ME19 914 aaKnown RBP6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 BAG2O95816 211 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 ATF3P18847 181 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 COPB1P53618 953 aaKnown RBP6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 CLUL1Q15846 466 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 CCDC62Q6P9F0 684 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 GOLGA8IPA6NC78 632 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 TEX9Q8N6V9 391 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 CLMNQ96JQ2 1002 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 BHMT2Q9H2M3 363 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 PHACTR3Q96KR7 559 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 CAAP1Q9H8G2 361 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 PLEKHH1Q9ULM0 1364 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 EFCAB5A4FU69 1503 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 LRPAP1P30533 357 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 IFT20Q8IY31 132 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 AFAP1L2Q8N4X5 818 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 DHX58Q96C10 678 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 MOSPD1Q9UJG1 213 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 UNC13AQ9UPW8 1703 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 TADA3O75528 432 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 NOP2P46087 812 aaKnown RBP6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 MTERF3Q96E29 417 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 TSNARE1Q96NA8 513 aa6.75□□□□□ -1.33
CDC42BPA-201ENST00000334218 CFAP69A5D8W1 941 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 TEX11Q8IYF3 940 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 SNX29Q8TEQ0 813 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 ZNF428Q96B54 188 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 GOLGA8CPA6NN73 597 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 CYTH1Q15438 398 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 FERMT2Q96AC1 680 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 DONSONQ9NYP3 566 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 DBNLQ9UJU6 430 aaKnown RBP6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 CHMP2BQ9UQN3 213 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 PRELID1Q9Y255 219 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 MYCNP04198 464 aaPredicted RBP6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 BBS9Q3SYG4 887 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 ERICH5Q6P6B1 374 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 SLC30A9Q6PML9 568 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 MLPHQ9BV36 600 aaPredicted RBP6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 SUFUQ9UMX1 484 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 CRCPO75575 148 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 STK38Q15208 465 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 CCDC82Q8N4S0 544 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 MPHOSPH9Q99550 1183 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 SYBUQ9NX95 663 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 TOP2BQ02880 1626 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 TRAK1Q9UPV9 953 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 S100A1P23297 94 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 MRPS15P82914 257 aaKnown RBP6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 XPCQ01831 940 aaPredicted RBP6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 GUCY1B3Q02153 619 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 KRT73Q86Y46 540 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 ABTB1Q969K4 478 aaPredicted RBP6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 TRIM56Q9BRZ2 755 aaKnown RBP6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 ACTR5Q9H9F9 607 aaPredicted RBP6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 BZW2Q9Y6E2 419 aaKnown RBP6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 URB2Q14146 1524 aaKnown RBP6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 PFDN4Q9NQP4 134 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 TTLL12Q14166 644 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms